Experiment set4IT044 for Methanococcus maripaludis JJ

Compare to:

Iron excess (2.5x) , H2 media

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS03360 +2.1 1.7 hypothetical protein compare
MMJJ_RS04720 +1.8 2.1 IMP dehydrogenase compare
MMJJ_RS01435 +1.8 12.7 4Fe-4S binding protein compare
MMJJ_RS01010 +1.5 13.8 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS01430 +1.5 8.5 hypothetical protein compare
MMJJ_RS07040 +1.5 1.2 preprotein translocase subunit SecY compare
MMJJ_RS04295 +1.4 9.4 DUF2202 domain-containing protein compare
MMJJ_RS09295 +1.4 1.2 hypothetical protein compare
MMJJ_RS00785 +1.3 2.0 hypothetical protein compare
MMJJ_RS09365 +1.3 1.9 hypothetical protein compare
MMJJ_RS08065 +1.3 1.1 precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT compare
MMJJ_RS08810 +1.3 1.1 DUF4040 domain-containing protein compare
MMJJ_RS00585 +1.2 8.3 S-layer protein compare
MMJJ_RS06385 +1.1 4.0 hypothetical protein compare
MMJJ_RS06105 +1.1 4.6 DUF99 family protein compare
MMJJ_RS06975 +1.1 2.4 protein translocase SEC61 complex subunit gamma compare
MMJJ_RS07825 +1.0 3.4 YciI family protein compare
MMJJ_RS06100 +1.0 5.0 rubrerythrin compare
MMJJ_RS09405 +1.0 2.4 hypothetical protein compare
MMJJ_RS06495 +1.0 2.2 hypothetical protein compare
MMJJ_RS06680 +1.0 3.4 DUF366 family protein compare
MMJJ_RS04415 +0.9 2.2 hypothetical protein compare
MMJJ_RS04440 +0.9 3.7 hypothetical protein compare
MMJJ_RS06585 +0.9 4.6 alanine racemase compare
MMJJ_RS05685 +0.8 3.2 class III signal peptide-containing protein compare
MMJJ_RS06505 +0.8 1.7 prephenate dehydratase compare
MMJJ_RS02285 +0.8 2.1 class III signal peptide-containing protein compare
MMJJ_RS06440 +0.8 3.7 DUF4870 domain-containing protein compare
MMJJ_RS08455 +0.8 2.9 tetratricopeptide repeat protein compare
MMJJ_RS09325 +0.8 2.9 hypothetical protein compare
MMJJ_RS06205 +0.8 3.9 EamA family transporter compare
MMJJ_RS05695 +0.8 2.3 class III signal peptide-containing protein compare
MMJJ_RS06515 +0.7 4.6 ribonuclease III compare
MMJJ_RS06445 +0.7 5.3 hypothetical protein compare
MMJJ_RS04340 +0.7 2.9 hypothetical protein compare
MMJJ_RS06130 +0.7 2.2 hypothetical protein compare
MMJJ_RS07795 +0.7 3.1 cupin domain-containing protein compare
MMJJ_RS06550 +0.7 4.3 ABC transporter permease compare
MMJJ_RS02295 +0.7 4.8 hypothetical protein compare
MMJJ_RS07915 +0.7 2.6 CBS domain-containing protein compare
MMJJ_RS06075 +0.7 3.2 DNA-binding protein Alba compare
MMJJ_RS06580 +0.7 3.5 alanine dehydrogenase compare
MMJJ_RS05700 +0.7 3.3 metallophosphoesterase compare
MMJJ_RS08390 +0.7 1.3 carboxymuconolactone decarboxylase family protein compare
MMJJ_RS07920 +0.7 3.4 6-carboxytetrahydropterin synthase QueD compare
MMJJ_RS09385 +0.7 2.9 class III signal peptide-containing protein compare
MMJJ_RS06160 +0.7 3.9 stage II sporulation protein M compare
MMJJ_RS03205 +0.7 2.3 metallophosphoesterase compare
MMJJ_RS01405 +0.7 0.4 proline--tRNA ligase compare
MMJJ_RS06430 +0.7 3.4 haloacid dehalogenase compare
MMJJ_RS04105 +0.7 4.1 prepilin peptidase compare
MMJJ_RS01285 +0.6 2.0 CopG family ribbon-helix-helix protein compare
MMJJ_RS06555 +0.6 3.8 ATP-binding cassette domain-containing protein compare
MMJJ_RS05040 +0.6 3.1 7-carboxy-7-deazaguanine synthase QueE compare
MMJJ_RS06465 +0.6 2.7 hypothetical protein compare
MMJJ_RS06055 +0.6 3.0 S-methyl-5-thioribose-1-phosphate isomerase compare
MMJJ_RS06470 +0.6 2.8 tripartite tricarboxylate transporter permease compare
MMJJ_RS06450 +0.6 3.3 DUF3343 domain-containing protein compare
MMJJ_RS07695 +0.6 4.2 glycoside hydrolase family 15 protein compare
MMJJ_RS06115 +0.6 3.4 pyruvate kinase compare
MMJJ_RS09390 +0.6 1.6 hypothetical protein compare
MMJJ_RS06960 +0.6 4.4 CAP domain-containing protein compare
MMJJ_RS02125 +0.6 1.6 hypothetical protein compare
MMJJ_RS06765 +0.6 3.9 hypothetical protein compare
MMJJ_RS05915 +0.6 1.0 multiprotein bridging factor aMBF1 compare
MMJJ_RS05300 +0.6 4.4 potassium channel protein compare
MMJJ_RS08410 +0.6 1.0 CBS domain-containing protein compare
MMJJ_RS04875 +0.6 0.7 tRNA-Lys compare
MMJJ_RS09355 +0.6 1.1 hypothetical protein compare
MMJJ_RS08880 +0.6 2.2 IMPACT family protein compare
MMJJ_RS06770 +0.6 3.7 hypothetical protein compare
MMJJ_RS02915 +0.6 2.4 hypothetical protein compare
MMJJ_RS02885 +0.6 1.9 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMJJ_RS06460 +0.6 2.0 cytochrome c compare
MMJJ_RS09225 +0.6 2.4 hypothetical protein compare
MMJJ_RS06235 +0.6 3.6 IGHMBP2 family helicase compare
MMJJ_RS06135 +0.5 2.9 50S ribosomal protein L11 methyltransferase compare
MMJJ_RS06080 +0.5 3.3 serine/threonine protein kinase compare
MMJJ_RS07270 +0.5 2.4 ribonuclease HII compare
MMJJ_RS09145 +0.5 2.5 exodeoxyribonuclease III compare
MMJJ_RS06925 +0.5 0.8 GMP synthase subunit A compare
MMJJ_RS05350 +0.5 2.0 DUF192 domain-containing protein compare
MMJJ_RS06280 +0.5 2.8 hypothetical protein compare
MMJJ_RS04555 +0.5 3.5 MATE family efflux transporter compare
MMJJ_RS03185 +0.5 0.5 alanine--tRNA ligase compare
MMJJ_RS04215 +0.5 3.2 DMT family transporter compare
MMJJ_RS09050 +0.5 1.4 hypothetical protein compare
MMJJ_RS03775 +0.5 1.0 50S ribosomal protein L15e compare
MMJJ_RS07200 +0.5 3.0 MFS transporter compare
MMJJ_RS07235 +0.5 3.1 coenzyme F420 hydrogenase subunit alpha compare
MMJJ_RS06275 +0.5 1.5 hypothetical protein compare
MMJJ_RS05665 +0.5 2.5 hypothetical protein compare
MMJJ_RS05730 +0.5 2.1 TIM barrel protein compare
MMJJ_RS06455 +0.5 2.5 YeeE/YedE family protein compare
MMJJ_RS02110 +0.5 2.4 carboxymuconolactone decarboxylase family protein compare
MMJJ_RS08290 +0.5 3.1 iron ABC transporter substrate-binding protein compare
MMJJ_RS00745 +0.5 1.2 hypothetical protein compare
MMJJ_RS07685 +0.5 2.8 glycogen/starch synthase compare
MMJJ_RS07760 +0.5 2.3 GNAT family N-acetyltransferase compare
MMJJ_RS05410 +0.4 1.9 RecB-family nuclease compare
MMJJ_RS06810 +0.4 2.9 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha compare
MMJJ_RS04855 +0.4 2.3 ECF transporter S component compare
MMJJ_RS06120 +0.4 2.0 DUF4013 domain-containing protein compare
MMJJ_RS03445 +0.4 1.3 hypothetical protein compare
MMJJ_RS05235 +0.4 3.1 Flp pilus assembly complex ATPase component TadA compare
MMJJ_RS05580 +0.4 1.7 methanogenesis marker 9 domain-containing protein compare
MMJJ_RS08030 +0.4 1.9 hypothetical protein compare
MMJJ_RS01955 +0.4 2.9 hypothetical protein compare
MMJJ_RS06045 +0.4 1.9 hypothetical protein compare
MMJJ_RS07025 +0.4 1.7 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMJJ_RS07855 +0.4 2.1 YkgJ family cysteine cluster protein compare
MMJJ_RS02270 +0.4 1.2 HEPN domain-containing protein compare
MMJJ_RS00140 +0.4 1.2 hypothetical protein compare
MMJJ_RS05205 +0.4 2.3 DUF2118 domain-containing protein compare
MMJJ_RS06520 +0.4 2.3 TldD/PmbA family protein compare
MMJJ_RS09015 +0.4 2.3 SPFH domain-containing protein compare
MMJJ_RS07790 +0.4 2.1 hypothetical protein compare
MMJJ_RS05960 +0.4 1.9 DUF169 domain-containing protein compare
MMJJ_RS04290 +0.4 2.2 hypothetical protein compare
MMJJ_RS08555 +0.4 2.2 redox-regulated ATPase YchF compare
MMJJ_RS01650 +0.4 2.8 acetolactate synthase large subunit compare
MMJJ_RS05895 +0.4 2.8 ABC transporter permease compare
MMJJ_RS05250 +0.4 1.6 HDIG domain-containing protein compare
MMJJ_RS07830 +0.4 2.1 DUF1786 domain-containing protein compare
MMJJ_RS05990 +0.4 1.5 phosphatase PAP2 family protein compare
MMJJ_RS06285 +0.4 1.7 YchF/TatD family DNA exonuclease compare
MMJJ_RS09010 +0.4 1.0 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMJJ_RS05955 +0.4 2.5 radical SAM protein compare
MMJJ_RS05335 +0.4 1.1 heavy metal-binding domain-containing protein compare
MMJJ_RS06710 +0.4 2.5 TldD/PmbA family protein compare
MMJJ_RS07620 +0.4 2.0 class I SAM-dependent rRNA methyltransferase compare
MMJJ_RS07675 +0.4 2.4 ADP-specific phosphofructokinase compare
MMJJ_RS06290 +0.4 1.4 DUF749 domain-containing protein compare
MMJJ_RS04220 +0.4 1.6 helix-turn-helix transcriptional regulator compare
MMJJ_RS08370 +0.4 1.0 hypothetical protein compare
MMJJ_RS05940 +0.4 2.0 HAD family hydrolase compare
MMJJ_RS06720 +0.4 1.9 mechanosensitive ion channel family protein compare
MMJJ_RS05600 +0.4 2.3 sodium:solute symporter family protein compare
MMJJ_RS08690 +0.4 1.9 phosphate ABC transporter substrate-binding protein compare
MMJJ_RS08930 +0.4 2.1 5'/3'-nucleotidase SurE compare
MMJJ_RS06475 +0.3 1.5 AAA family ATPase compare
MMJJ_RS08295 +0.3 2.5 iron ABC transporter substrate-binding protein compare
MMJJ_RS05890 +0.3 2.0 molybdate ABC transporter substrate-binding protein compare
MMJJ_RS07490 +0.3 0.6 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMJJ_RS00150 +0.3 1.2 DUF2180 family protein compare
MMJJ_RS07445 +0.3 1.7 RlmF-related methyltransferase compare
MMJJ_RS07800 +0.3 2.2 AMP-binding protein compare
MMJJ_RS03725 +0.3 0.5 sulfurtransferase TusA family protein compare
MMJJ_RS01205 +0.3 1.8 DNA adenine methylase compare
MMJJ_RS01210 +0.3 0.4 hypothetical protein compare
MMJJ_RS04065 +0.3 1.6 hypothetical protein compare
MMJJ_RS07215 +0.3 1.9 TIGR00341 family protein compare
MMJJ_RS04350 +0.3 0.9 hypothetical protein compare
MMJJ_RS03955 +0.3 1.6 hypothetical protein compare
MMJJ_RS07750 +0.3 0.8 class III signal peptide-containing protein compare
MMJJ_RS06085 +0.3 1.1 proteasome assembly chaperone family protein compare
MMJJ_RS07610 +0.3 1.2 DUF2119 domain-containing protein compare
MMJJ_RS08165 +0.3 1.4 thermonuclease family protein compare
MMJJ_RS06190 +0.3 1.8 7-cyano-7-deazaguanine synthase compare
MMJJ_RS08685 +0.3 1.9 phosphate ABC transporter permease subunit PstC compare
MMJJ_RS04410 +0.3 0.8 hypothetical protein compare
MMJJ_RS08420 +0.3 2.1 uroporphyrinogen decarboxylase family protein compare
MMJJ_RS07205 +0.3 0.9 MTH895/ArsE family thioredoxin-like protein compare
MMJJ_RS04745 +0.3 1.1 cyclase family protein compare
MMJJ_RS05290 +0.3 2.3 DUF4013 domain-containing protein compare
MMJJ_RS04285 +0.3 1.6 ABC transporter substrate-binding protein compare
MMJJ_RS04550 +0.3 1.6 ATP-binding cassette domain-containing protein compare
MMJJ_RS02365 +0.3 0.8 DUF2540 domain-containing protein compare
MMJJ_RS07910 +0.3 1.4 CBS domain-containing protein compare
MMJJ_RS07495 +0.3 1.2 4Fe-4S binding protein compare
MMJJ_RS07240 +0.3 2.3 MBL fold metallo-hydrolase compare
MMJJ_RS05875 +0.3 2.3 hypothetical protein compare
MMJJ_RS08900 +0.3 1.7 DUF523 and DUF1722 domain-containing protein compare
MMJJ_RS05585 +0.3 1.4 hypothetical protein compare
MMJJ_RS05495 +0.3 1.4 MinD/ParA family protein compare
MMJJ_RS02970 +0.3 1.8 DUF378 domain-containing protein compare
MMJJ_RS00820 +0.3 1.7 MtaA/CmuA family methyltransferase compare
MMJJ_RS02095 +0.3 1.3 DUF2124 family protein compare
MMJJ_RS05055 +0.3 1.3 hypothetical protein compare
MMJJ_RS03115 +0.3 0.6 sulfopyruvate decarboxylase subunit alpha compare
MMJJ_RS02665 +0.3 0.5 methyl-accepting chemotaxis protein compare
MMJJ_RS05965 +0.3 1.8 MFS transporter compare
MMJJ_RS04330 +0.3 1.6 DUF2540 domain-containing protein compare
MMJJ_RS07220 +0.3 1.6 coenzyme F420 hydrogenase subunit beta compare
MMJJ_RS06790 +0.3 1.7 nucleotidyltransferase family protein compare
MMJJ_RS05100 +0.3 0.9 P-II family nitrogen regulator compare
MMJJ_RS01670 +0.3 0.9 hypothetical protein compare
MMJJ_RS08635 +0.3 1.1 hypothetical protein compare
MMJJ_RS05500 +0.3 2.1 hypothetical protein compare
MMJJ_RS07420 +0.3 1.3 protease complex subunit PrcB family protein compare
MMJJ_RS08285 +0.3 1.7 class I SAM-dependent methyltransferase compare
MMJJ_RS07815 +0.3 1.7 2-oxoacid:acceptor oxidoreductase family protein compare
MMJJ_RS05980 +0.3 1.1 DUF5400 domain-containing protein compare
MMJJ_RS09020 +0.3 0.9 hypothetical protein compare
MMJJ_RS09380 +0.3 0.5 hypothetical protein compare
MMJJ_RS02120 +0.3 0.8 DJ-1/PfpI family protein compare
MMJJ_RS01850 +0.3 1.1 RNA 2',3'-cyclic phosphodiesterase compare
MMJJ_RS00655 +0.3 0.9 CBS domain-containing protein compare
MMJJ_RS01310 +0.3 1.7 phenylacetate--CoA ligase compare
MMJJ_RS04055 +0.3 0.9 hypothetical protein compare


Specific Phenotypes

For 4 genes in this experiment

For iron Iron (II) chloride tetrahydrate in Methanococcus maripaludis JJ

For iron Iron (II) chloride tetrahydrate across organisms