Experiment set4IT030 for Agrobacterium fabrum C58

Compare to:

R2A with Sodium Chlorite 0.2 mM

200 most important genes:

  gene name fitness t score description  
Atu1687 -3.2 -7.1 anthranilate phosphoribosyltransferase compare
Atu0953 -2.9 -2.1 hypothetical protein compare
Atu1688 -2.6 -4.6 indole-3-glycerol-phosphate synthase compare
Atu0434 -2.4 -2.8 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu3469 -2.4 -2.7 phosphoglyceromutase compare
Atu0017 -2.3 -2.8 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1028 -2.1 -3.6 hypothetical protein compare
Atu2289 -2.0 -10.4 anthranilate synthase component I and II compare
Atu2684 -1.8 -1.9 hypothetical protein compare
Atu1685 -1.8 -1.4 hypothetical protein compare
Atu2710 -1.7 -8.3 hypothetical protein compare
Atu0103 -1.7 -8.2 penicillin-binding protein compare
Atu0346 -1.6 -2.3 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0184 -1.6 -3.5 glucokinase compare
Atu2193 -1.5 -1.4 hypothetical protein compare
Atu0188 -1.5 -5.2 ABC transporter, membrane spanning protein (peptide) compare
Atu0598 -1.5 -7.5 phosphogluconate dehydratase compare
Atu2113 -1.5 -2.8 N-acetylmuramoyl-L-alanine amidase compare
Atu0824 -1.5 -1.7 hypothetical protein compare
Atu0400 -1.4 -3.4 orotate phosphoribosyltransferase compare
Atu1030 -1.4 -1.6 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu5430 -1.4 -1.0 hypothetical protein compare
Atu1774 -1.4 -5.2 ABC transporter, substrate binding protein (peptide) compare
Atu0190 -1.3 -5.6 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu0972 -1.3 -5.7 lipA protein compare
Atu3750 -1.3 -3.0 thiamine-phosphate pyrophosphorylase compare
Atu1127 -1.3 -2.0 molybdopterin converting factor small subunit compare
Atu0189 -1.3 -4.0 ABC transporter, membrane spanning protein (peptide) compare
Atu0399 -1.3 -4.2 dihydroorotase compare
Atu1847 -1.2 -1.8 hypothetical protein compare
Atu1364 -1.2 -4.4 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0486 -1.2 -3.8 dihydroorotate dehydrogenase compare
Atu0647 -1.2 -3.5 phosphoribosylamine--glycine ligase compare
Atu3120 -1.2 -1.3 hypothetical protein compare
Atu0723 -1.2 -1.8 FAD dependent oxidoreductase compare
Atu5427 -1.1 -1.9 hypothetical protein compare
Atu3754 -1.1 -5.4 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu2368 -1.1 -1.4 hypothetical protein compare
Atu5493 -1.1 -2.9 hypothetical protein compare
Atu1686 -1.1 -6.3 peptidyl-prolyl cis-trans isomerse D compare
Atu0298 -1.0 -5.1 orotidine 5 compare
Atu3755 -1.0 -3.0 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu4075 -1.0 -5.1 glycogen synthase compare
Atu3014 -1.0 -2.5 hypothetical protein compare
Atu3739 -1.0 -2.3 phosphoglycerate kinase compare
Atu3510 -1.0 -1.9 amidohydrolase compare
Atu1308 -1.0 -3.1 aspartate carbamoyl transferase catalytic subunit compare
Atu3763 -1.0 -1.6 hypothetical protein compare
Atu0086 -1.0 -1.0 ribosome-binding factor A compare
Atu4072 -1.0 -1.1 nodulation protein N compare
Atu4418 -1.0 -2.2 glutaryl-CoA dehydrogenase compare
Atu1140 -0.9 -2.6 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu3001 -0.9 -1.5 hypothetical protein compare
Atu1307 -0.9 -3.6 dihydroorotase compare
Atu0640 -0.9 -0.9 hypothetical protein compare
Atu2728 -0.9 -2.6 beta (1-->2) glucan export ATP-binding protein compare
Atu1225 -0.9 -1.2 hypothetical protein compare
Atu2127 -0.9 -4.2 L-carnitine dehydratase compare
Atu0039 -0.9 -1.8 imidazoleglycerol-phosphate synthase cyclase compare
Atu1968 -0.9 -1.8 hypothetical protein compare
Atu0185 -0.9 -3.1 methylglyoxal synthase compare
Atu1075 -0.8 -3.9 amidophosphoribosyltransferase compare
Atu2140 -0.8 -2.4 hypothetical protein compare
Atu0470 -0.8 -2.1 hypothetical protein compare
Atu0413 -0.8 -1.7 stress induced protein compare
Atu0031 -0.8 -1.3 PTS system, IIA component compare
Atu1110 -0.8 -1.6 cytosol aminopeptidase compare
Atu8191 -0.8 -1.4 hypothetical protein compare
Atu2640 -0.8 -2.3 hypothetical protein compare
Atu3012 -0.8 -1.7 hypothetical protein compare
Atu2346 -0.8 -5.6 ABC transporter, membrane spanning protein (sugar) compare
Atu0762 -0.8 -1.5 hypothetical protein compare
Atu1141 -0.8 -2.8 Phosphoribosylglycinamide synthetase compare
Atu2020 -0.7 -2.5 transcriptional regulator, TetR family compare
Atu1845 -0.7 -1.4 phosphoribosylformylglycinamidine synthase I compare
Atu1469 -0.7 -2.2 hypothetical protein compare
Atu1588 -0.7 -3.9 homoserine dehydrogenase compare
Atu3759 -0.7 -1.2 hypothetical protein compare
Atu2347 -0.7 -4.1 ABC transporter, nucleotide binding/ATPase protein (sugar) compare
Atu1844 -0.7 -1.5 Phosphoribosylformylglycinamidine synthetase compare
Atu2548 -0.7 -4.6 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu0941 -0.7 -0.7 hypothetical protein compare
Atu3017 -0.7 -1.2 phosphoglyceromutase compare
Atu1836 -0.7 -1.5 hypothetical protein compare
Atu3064 -0.7 -3.0 ABC transporter permease compare
Atu8126 -0.7 -2.4 putative phage tail protein I compare
Atu2348 -0.7 -4.6 sugar binding protein compare
Atu0025 -0.7 -1.6 hypothetical protein compare
Atu0592 -0.7 -3.1 ABC transporter, membrane spanning protein compare
Atu0119 -0.6 -1.0 hypothetical protein compare
Atu8025 -0.6 -0.8 hypothetical protein compare
Atu1677 -0.6 -2.8 queuine tRNA-ribosyltransferase compare
Atu1466 -0.6 -1.1 hypothetical protein compare
Atu2083 -0.6 -1.4 DNA repair protein RecN compare
Atu0701 -0.6 -3.2 GGDEF family protein compare
Atu3031 -0.6 -1.0 hypothetical protein compare
Atu5424 -0.6 -3.4 oxidoreductase compare
Atu3707 -0.6 -1.5 phosphoserine aminotransferase compare
Atu2192 -0.6 -1.0 hypothetical protein compare
Atu3353 -0.6 -4.2 mannose-1-phosphate guanylyltransferase compare
Atu0593 -0.6 -2.9 ABC transporter, membrane spanning protein compare
Atu0591 -0.6 -3.6 ABC transporter, substrate binding protein (alpha-glucoside) compare
Atu0225 -0.6 -0.7 hypothetical protein compare
Atu1163 -0.6 -1.4 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu3018 -0.6 -2.7 hypothetical protein compare
Atu2187 -0.6 -2.6 transcriptional regulator, ArsR family compare
Atu2057 -0.6 -1.1 DNA helicase II compare
Atu3032 -0.6 -2.5 hypothetical protein compare
Atu1891 -0.6 -2.2 cobalamin biosynthesis protein compare
Atu4144 -0.6 -0.8 hypothetical protein compare
Atu1213 -0.6 -1.3 hypothetical protein compare
Atu3327 -0.6 -2.3 succinoglycan exopolysaccharide synthesis protein compare
Atu4884 -0.6 -1.3 hypothetical protein compare
Atu1754 -0.6 -1.0 hypothetical protein compare
Atu4108 -0.6 -2.7 ribonuclease D compare
Atu1302 -0.6 -1.3 hypothetical protein compare
Atu1500 -0.6 -2.5 rare lipoprotein A compare
Atu1835 -0.6 -1.0 hypothetical protein compare
Atu5010 -0.6 -1.4 hypothetical protein compare
Atu1077 -0.6 -1.7 DNA repair protein compare
Atu3623 -0.6 -2.0 DnaJ family molecular chaperone compare
Atu5170 -0.5 -2.0 type IV secretion protein AvhB9 compare
Atu1344 -0.5 -1.3 hypothetical protein compare
Atu3095 -0.5 -1.3 hypothetical protein compare
Atu0786 -0.5 -1.4 peptidase, family M16 compare
Atu6160 -0.5 -2.3 conserved hypothetical protein compare
Atu8032 -0.5 -1.7 hypothetical protein compare
Atu2452 -0.5 -1.7 hypothetical protein compare
Atu3666 -0.5 -2.9 hypothetical protein compare
Atu2058 -0.5 -2.6 hypothetical protein compare
Atu0537 -0.5 -1.8 histidinol dehydrogenase compare
Atu1580 -0.5 -3.2 ABC transporter, nucleotide binding/ATPase protein (amino acid) compare
Atu0876 -0.5 -1.2 superoxide dismutase compare
Atu5028 -0.5 -2.0 IS426 transposase compare
Atu4864 -0.5 -1.9 MarR family transcriptional regulator compare
Atu8176 -0.5 -1.1 hypothetical protein compare
Atu0471 -0.5 -2.1 hypothetical protein compare
Atu2267 -0.5 -2.8 hypothetical protein compare
Atu0894 -0.5 -1.0 ABC transporter, membrane spanning protein compare
Atu3121 -0.5 -0.8 cold shock protein compare
Atu0460 -0.5 -2.3 hypothetical protein compare
Atu1793 -0.5 -2.5 phosphatidylcholine synthase compare
Atu0477 -0.5 -1.0 hypothetical protein compare
Atu0115 -0.5 -0.6 hypothetical protein compare
Atu8144 -0.5 -1.5 hypothetical protein compare
Atu2802 -0.5 -2.3 precorrin-8X methylmutase compare
Atu3183 -0.5 -0.5 hypothetical protein compare
Atu2120 -0.5 -1.8 O-methyltransferase compare
Atu1076 -0.5 -1.7 colicin V production protein compare
Atu3048 -0.5 -2.6 oligopeptide ABC transporter permease compare
Atu0920 -0.5 -2.1 hypothetical protein compare
Atu0703 -0.5 -0.8 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
Atu3009 -0.5 -0.7 exopolysaccharide production protein compare
Atu4173 -0.5 -1.3 phosphoenolpyruvate-protein phosphotransferase compare
Atu3468 -0.5 -0.6 hypothetical protein compare
Atu4419 -0.5 -2.2 LysR family transcriptional regulator compare
Atu4880 -0.5 -2.7 AraC family transcriptional regulator compare
Atu0565 -0.5 -2.0 hypothetical protein compare
Atu4618 -0.5 -3.3 dTDP-rhamnose-3,5-epimerase compare
Atu0469 -0.5 -2.9 hypothetical protein compare
Atu1983 -0.5 -2.2 hypothetical protein compare
Atu2324 -0.5 -1.8 ureidoglycolate hydrolase compare
Atu0050 -0.5 -2.1 two component response regulator compare
Atu4859 -0.5 -3.1 hypothetical protein compare
Atu0141 -0.5 -0.8 cytochrome O ubiquinol oxidase subunit I compare
Atu0029 -0.5 -1.8 S-adenosylhomocysteine hydrolase compare
Atu2040 -0.5 -1.7 phosphoserine phosphatase compare
Atu4061 -0.5 -1.1 exopolysaccharide production repressor protein compare
Atu4857 -0.4 -1.4 mobilization protein C compare
Atu1570 -0.4 -0.6 hypothetical protein compare
Atu4617 -0.4 -3.2 dTDP-D-glucose-4,6-dehydratase compare
Atu4868 -0.4 -3.0 oxidoreductase compare
Atu0935 -0.4 -1.8 hypothetical protein compare
Atu0105 -0.4 -1.2 hypothetical protein compare
Atu0051 -0.4 -1.8 two component sensor kinase compare
Atu1869 -0.4 -1.7 hypothetical protein compare
Atu4041 -0.4 -1.8 ribosomal large subunit pseudouridine synthase A compare
Atu3182 -0.4 -1.1 hypothetical protein compare
Atu4317 -0.4 -1.1 TetR family transcriptional regulator compare
Atu6045 -0.4 -0.8 replication protein C compare
Atu1667 -0.4 -0.8 hypothetical protein compare
Atu0536 -0.4 -1.7 hypothetical protein compare
Atu6189 -0.4 -0.6 protein secretion chaperone compare
Atu3315 -0.4 -1.3 UDP-glucose 4-epimerase compare
Atu6098 -0.4 -0.4 transcriptional regulator, HTH family compare
Atu3578 -0.4 -1.9 glycerol-3-phosphate dehydrogenase compare
Atu1850 -0.4 -1.4 phosphoribosylformylglycinamidine synthetase II compare
Atu2207 -0.4 -1.1 two component sensor kinase compare
Atu0730 -0.4 -1.6 hypothetical protein compare
Atu0659 -0.4 -1.6 NTP pyrophosphohydrolase, MutT family compare
Atu2439 -0.4 -0.4 hypothetical protein compare
Atu4890 -0.4 -0.8 IS426 transposase compare
Atu0457 -0.4 -3.1 hypothetical protein compare
Atu0641 -0.4 -1.2 hypothetical protein compare
Atu3706 -0.4 -2.2 D-3-phosphoglycerate dehydrogenase compare
Atu2770 -0.4 -2.2 acetoacetyl CoA reductase; poly-beta-hydroxybutyrate biosynthesis compare
Atu3583 -0.4 -1.6 hypothetical protein compare
Atu4635 -0.4 -1.8 hypothetical protein compare
Atu1176 -0.4 -1.2 hypothetical protein compare
Atu0097 -0.4 -2.2 hypothetical protein compare


Specific Phenotypes

For 5 genes in this experiment

For stress Sodium Chlorite in Agrobacterium fabrum C58

For stress Sodium Chlorite across organisms