Experiment set4IT024 for Methanococcus maripaludis S2

Compare to:

H2 deepwell vitamin and casamino acid FREE

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS03620 +2.3 14.2 hypothetical protein compare
MMP_RS03615 +2.2 12.2 4Fe-4S binding protein compare
MMP_RS07890 +1.6 3.4 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS04550 +1.6 12.0 S-layer protein compare
MMP_RS07125 +1.5 6.6 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS09055 +1.3 1.2 CAP domain-containing protein compare
MMP_RS03300 +1.3 1.2 TOBE domain-containing protein compare
MMP_RS00395 +1.2 2.1 MGMT family protein compare
MMP_RS08855 +1.2 4.7 hypothetical protein compare
MMP_RS09025 +1.2 1.3 hypothetical protein compare
MMP_RS01310 +1.1 6.9 hypothetical protein compare
MMP_RS08860 +1.1 2.5 MinD/ParA family protein compare
MMP_RS06175 +1.1 2.8 winged helix-turn-helix transcriptional regulator compare
MMP_RS00240 +1.1 6.4 type II secretion system F family protein compare
MMP_RS02675 +1.1 1.3 hypothetical protein compare
MMP_RS07885 +1.0 2.2 tripartite tricarboxylate transporter permease compare
MMP_RS02415 +1.0 2.4 site-specific integrase compare
MMP_RS01865 +1.0 1.5 GPR1/FUN34/YaaH family transporter compare
MMP_RS08580 +1.0 4.5 flagellin compare
MMP_RS08275 +0.9 5.1 hypothetical protein compare
MMP_RS02595 +0.9 1.3 putative zinc-binding protein compare
MMP_RS01295 +0.9 4.5 hypothetical protein compare
MMP_RS08665 +0.9 5.9 hypothetical protein compare
MMP_RS01055 +0.9 3.1 hypothetical protein compare
MMP_RS00245 +0.9 6.0 type II secretion system F family protein compare
MMP_RS06745 +0.9 3.3 DUF2119 domain-containing protein compare
MMP_RS00990 +0.9 3.0 hypothetical protein compare
MMP_RS07840 +0.8 2.2 ribonuclease III compare
MMP_RS06910 +0.8 3.6 RlmF-related methyltransferase compare
MMP_RS06070 +0.8 5.2 iron ABC transporter substrate-binding protein compare
MMP_RS08090 +0.8 3.4 hypothetical protein compare
MMP_RS07095 +0.8 1.2 PspC domain-containing protein compare
MMP_RS03965 +0.8 1.8 hypothetical protein compare
MMP_RS08670 +0.8 2.7 metallophosphoesterase compare
MMP_RS03125 +0.8 2.4 cell division ATPase MinD compare
MMP_RS04520 +0.8 1.7 nucleoside deaminase compare
MMP_RS01460 +0.8 2.4 hypothetical protein compare
MMP_RS06440 +0.8 3.4 CBS domain-containing protein compare
MMP_RS02470 +0.8 0.7 helix-turn-helix transcriptional regulator compare
MMP_RS01290 +0.7 3.5 class III signal peptide-containing protein compare
MMP_RS00140 +0.7 2.9 DUF192 domain-containing protein compare
MMP_RS00125 +0.7 1.1 DUF2798 domain-containing protein compare
MMP_RS01305 +0.7 4.7 hypothetical protein compare
MMP_RS02490 +0.7 2.6 hypothetical protein compare
MMP_RS08130 +0.7 3.9 IGHMBP2 family helicase compare
MMP_RS08930 +0.7 1.0 hypothetical protein compare
MMP_RS05910 +0.7 1.5 cell division ATPase MinD compare
MMP_RS01315 +0.7 5.4 DUF2341 domain-containing protein compare
MMP_RS09050 +0.7 2.0 CAP domain-containing protein compare
MMP_RS03065 +0.7 1.3 AzlC family ABC transporter permease compare
MMP_RS08430 +0.7 2.4 HAD family hydrolase compare
MMP_RS08555 +0.7 1.3 hypothetical protein compare
MMP_RS05825 +0.7 1.4 peptidyl-prolyl cis-trans isomerase compare
MMP_RS02475 +0.7 1.7 hypothetical protein compare
MMP_RS00565 +0.7 3.1 CBS domain-containing protein compare
MMP_RS07770 +0.6 1.8 alanine racemase compare
MMP_RS02310 +0.6 0.9 RimK-like ATPgrasp N-terminal domain-containing protein compare
MMP_RS00250 +0.6 4.1 Flp pilus assembly complex ATPase component TadA compare
MMP_RS08640 +0.6 2.8 TIM barrel protein compare
MMP_RS09045 +0.6 3.6 class III signal peptide-containing protein compare
MMP_RS07130 +0.6 2.6 coenzyme F420 hydrogenase subunit gamma compare
MMP_RS06520 +0.6 2.2 DUF1786 domain-containing protein compare
MMP_RS08215 +0.6 1.1 DUF483 domain-containing protein compare
MMP_RS02300 +0.6 2.6 NAD(P)H-dependent oxidoreductase compare
MMP_RS08325 +0.6 2.9 hypothetical protein compare
MMP_RS08315 +0.6 1.0 S-methyl-5-thioribose-1-phosphate isomerase compare
MMP_RS08850 +0.6 3.9 hypothetical protein compare
MMP_RS06335 +0.6 1.4 HAD family hydrolase compare
MMP_RS07155 +0.6 2.8 MFS transporter compare
MMP_RS01300 +0.6 3.6 hypothetical protein compare
MMP_RS07895 +0.5 1.2 cytochrome c compare
MMP_RS08625 +0.5 3.2 type II/IV secretion system ATPase subunit compare
MMP_RS07560 +0.5 2.0 prefoldin subunit alpha compare
MMP_RS01180 +0.5 0.6 XTP/dITP diphosphatase compare
MMP_RS08755 +0.5 3.3 sodium:solute symporter family protein compare
MMP_RS01515 +0.5 3.1 PINc/VapC family ATPase compare
MMP_RS01155 +0.5 1.1 XRE family transcriptional regulator compare
MMP_RS08290 +0.5 2.4 DNA-binding protein Alba compare
MMP_RS08620 +0.5 2.0 flagellar accessory protein FlaH compare
MMP_RS03090 +0.5 1.6 cation:proton antiporter compare
MMP_RS01285 +0.5 2.1 hypothetical protein compare
MMP_RS06500 +0.5 2.3 ATP-binding protein compare
MMP_RS05970 +0.5 1.7 class II SORL domain-containing protein compare
MMP_RS02650 +0.5 2.0 flavodoxin family protein compare
MMP_RS07120 +0.5 2.2 coenzyme F420 hydrogenase subunit alpha compare
MMP_RS02450 +0.5 1.4 hypothetical protein compare
MMP_RS03870 +0.5 1.7 purine NTPase compare
MMP_RS03280 +0.5 2.9 pyridoxamine 5'-phosphate oxidase family protein compare
MMP_RS06585 +0.5 0.7 DMT family protein compare
MMP_RS00700 +0.5 1.6 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS01620 +0.5 1.4 hypothetical protein compare
MMP_RS07805 +0.5 1.9 ABC transporter permease compare
MMP_RS00935 +0.5 2.6 MATE family efflux transporter compare
MMP_RS06155 +0.5 1.3 DUF4186 domain-containing protein compare
MMP_RS08225 +0.5 2.9 RimK family alpha-L-glutamate ligase compare
MMP_RS01435 +0.5 1.3 DMT family transporter compare
MMP_RS01130 +0.5 2.5 flavoprotein compare
MMP_RS06715 +0.5 2.3 cache domain-containing protein compare
MMP_RS03490 +0.5 0.7 DUF2115 domain-containing protein compare
MMP_RS07765 +0.5 2.1 sodium:alanine symporter family protein compare
MMP_RS07650 +0.5 2.8 TldD/PmbA family protein compare
MMP_RS00185 +0.5 2.9 potassium channel protein compare
MMP_RS09035 +0.5 1.0 hypothetical protein compare
MMP_RS08500 +0.5 1.5 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS08160 +0.5 1.6 EamA family transporter compare
MMP_RS05355 +0.5 0.4 hypothetical protein compare
MMP_RS06190 +0.5 2.7 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO compare
MMP_RS05945 +0.5 0.9 CBS domain-containing protein compare
MMP_RS08235 +0.5 1.5 hypothetical protein compare
MMP_RS07140 +0.5 2.8 TIGR00341 family protein compare
MMP_RS05470 +0.5 2.9 DUF523 and DUF1722 domain-containing protein compare
MMP_RS01280 +0.5 2.5 DUF515 domain-containing protein compare
MMP_RS00955 +0.5 2.8 coenzyme gamma-F420-2:alpha-L-glutamate ligase compare
MMP_RS05985 +0.5 1.4 hypothetical protein compare
MMP_RS06055 +0.5 1.3 peroxiredoxin compare
MMP_RS02915 +0.5 1.5 amino acid ABC transporter permease compare
MMP_RS07900 +0.5 0.8 YeeE/YedE family protein compare
MMP_RS00940 +0.4 1.8 daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein compare
MMP_RS01165 +0.4 1.9 DUF434 domain-containing protein compare
MMP_RS06560 +0.4 2.6 hypothetical protein compare
MMP_RS04145 +0.4 0.6 hypothetical protein compare
MMP_RS01095 +0.4 1.3 iron ABC transporter permease compare
MMP_RS00960 +0.4 1.3 iron export ABC transporter permease subunit FetB compare
MMP_RS06080 +0.4 2.8 radical SAM protein compare
MMP_RS02795 +0.4 2.3 sulfate permease compare
MMP_RS02265 +0.4 1.0 nitroreductase family protein compare
MMP_RS06150 +0.4 2.7 hypothetical protein compare
MMP_RS08470 +0.4 1.7 ATP-binding cassette domain-containing protein compare
MMP_RS09065 +0.4 2.9 hypothetical protein compare
MMP_RS08200 +0.4 2.5 archaeosine synthase subunit alpha compare
MMP_RS08250 +0.4 1.9 pyruvate kinase compare
MMP_RS00675 +0.4 0.4 nitroreductase family protein compare
MMP_RS00670 +0.4 1.0 TIM barrel protein compare
MMP_RS07570 +0.4 2.4 nucleotidyltransferase family protein compare
MMP_RS05720 +0.4 1.2 signal recognition particle subunit SRP19/SEC65 family protein compare
MMP_RS06675 +0.4 1.7 ADP-specific phosphofructokinase compare
MMP_RS00235 +0.4 2.0 HDIG domain-containing protein compare
MMP_RS05715 +0.4 1.7 hypothetical protein compare
MMP_RS01640 +0.4 1.9 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMP_RS08285 +0.4 1.7 serine/threonine protein kinase compare
MMP_RS06140 +0.4 1.1 radical SAM protein compare
MMP_RS01210 +0.4 1.9 sodium:solute symporter compare
MMP_RS01275 +0.4 1.7 class III signal peptide-containing protein compare
MMP_RS08385 +0.4 1.2 ABC transporter substrate-binding protein compare
MMP_RS08940 +0.4 0.4 MetS family NSS transporter small subunit compare
MMP_RS08395 +0.4 1.4 DsrE family protein compare
MMP_RS08245 +0.4 1.3 DUF4013 domain-containing protein compare
MMP_RS03100 +0.4 1.0 hypothetical protein compare
MMP_RS00945 +0.4 0.4 PadR family transcriptional regulator compare
MMP_RS05360 +0.4 1.0 hypothetical protein compare
MMP_RS08205 +0.4 1.7 stage II sporulation protein M compare
MMP_RS01660 +0.4 1.2 hypothetical protein compare
MMP_RS01750 +0.4 1.9 DUF63 family protein compare
MMP_RS08775 +0.4 1.4 methanogenesis marker 9 domain-containing protein compare
MMP_RS08685 +0.4 2.1 hypothetical protein compare
MMP_RS06915 +0.4 1.0 metallophosphoesterase compare
MMP_RS04845 +0.4 1.7 CheF family chemotaxis protein compare
MMP_RS07590 +0.4 1.9 hypothetical protein compare
MMP_RS07905 +0.4 1.1 DUF3343 domain-containing protein compare
MMP_RS06735 +0.4 0.8 class I SAM-dependent rRNA methyltransferase compare
MMP_RS04665 +0.4 2.9 SBBP repeat-containing protein compare
MMP_RS01120 +0.4 1.3 permease compare
MMP_RS02770 +0.4 1.0 hypothetical protein compare
MMP_RS08400 +0.3 0.6 MJ0307 family thioredoxin compare
MMP_RS01430 +0.3 1.4 mechanosensitive ion channel family protein compare
MMP_RS06250 +0.3 1.4 hypothetical protein compare
MMP_RS07915 +0.3 0.8 DUF4870 domain-containing protein compare
MMP_RS00570 +0.3 0.6 protein-L-isoaspartate O-methyltransferase compare
MMP_RS05980 +0.3 1.3 ferritin compare
MMP_RS08260 +0.3 1.4 DUF99 family protein compare
MMP_RS07135 +0.3 1.3 coenzyme F420 hydrogenase subunit beta compare
MMP_RS07715 +0.3 1.4 YfcE family phosphodiesterase compare
MMP_RS04835 +0.3 1.2 chemotaxis protein CheC compare
MMP_RS02965 +0.3 1.3 carboxymuconolactone decarboxylase family protein compare
MMP_RS01420 +0.3 0.5 hypothetical protein compare
MMP_RS05615 +0.3 1.9 radical SAM protein compare
MMP_RS05140 +0.3 0.6 helix-turn-helix transcriptional regulator compare
MMP_RS02305 +0.3 1.8 DUF378 domain-containing protein compare
MMP_RS02725 +0.3 1.7 molybdate ABC transporter permease subunit compare
MMP_RS02890 +0.3 1.4 TIGR00296 family protein compare
MMP_RS05695 +0.3 1.3 phospholipase D-like domain-containing protein compare
MMP_RS06575 +0.3 1.0 fluoride efflux transporter CrcB compare
MMP_RS08770 +0.3 1.5 hypothetical protein compare
MMP_RS05785 +0.3 1.9 ATP-binding protein compare
MMP_RS01980 +0.3 2.0 trimeric intracellular cation channel family protein compare
MMP_RS08750 +0.3 0.9 hypothetical protein compare
MMP_RS00085 +0.3 1.4 DNA cytosine methyltransferase compare
MMP_RS08490 +0.3 2.1 hypothetical protein compare
MMP_RS00055 +0.3 1.8 DUF2254 domain-containing protein compare
MMP_RS06225 +0.3 1.0 DNA double-strand break repair nuclease NurA compare
MMP_RS00825 +0.3 0.5 fumarylacetoacetate hydrolase family protein compare
MMP_RS08630 +0.3 1.6 archaellar assembly protein FlaJ compare
MMP_RS07925 +0.3 1.0 haloacid dehalogenase compare
MMP_RS06600 +0.3 0.2 class III signal peptide-containing protein compare
MMP_RS01655 +0.3 0.6 DsrE family protein compare
MMP_RS08610 +0.3 1.5 flagellar protein F compare
MMP_RS04580 +0.3 1.3 hypothetical protein compare
MMP_RS06085 +0.3 2.0 iron ABC transporter substrate-binding protein compare
MMP_RS07855 +0.3 1.5 class I SAM-dependent methyltransferase compare
MMP_RS09030 +0.3 1.1 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in nutrient t2 experiments

For nutrient t2 Sodium acetate across organisms