Experiment set4IT006 for Methanococcus maripaludis S2

Compare to:

H2 deepwell vitamin FREE

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS02045 +1.9 4.3 tRNA-Met compare
MMP_RS05975 +1.4 2.8 hypothetical protein compare
MMP_RS09025 +1.4 2.0 hypothetical protein compare
MMP_RS06585 +1.1 2.3 DMT family protein compare
MMP_RS00655 +1.0 2.8 hypothetical protein compare
MMP_RS07925 +1.0 2.9 haloacid dehalogenase compare
MMP_RS02605 +1.0 1.0 MotA/TolQ/ExbB proton channel family protein compare
MMP_RS07900 +1.0 1.2 YeeE/YedE family protein compare
MMP_RS01620 +0.9 2.4 hypothetical protein compare
MMP_RS08500 +0.9 2.7 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS01055 +0.9 3.0 hypothetical protein compare
MMP_RS04145 +0.9 1.8 hypothetical protein compare
MMP_RS01200 +0.9 4.0 hypothetical protein compare
MMP_RS02745 +0.9 1.6 hypothetical protein compare
MMP_RS00430 +0.9 2.6 hypothetical protein compare
MMP_RS00670 +0.9 2.3 TIM barrel protein compare
MMP_RS00125 +0.9 1.6 DUF2798 domain-containing protein compare
MMP_RS00705 +0.8 1.7 hypothetical protein compare
MMP_RS02740 +0.8 2.3 hypothetical protein compare
MMP_RS02675 +0.8 1.3 hypothetical protein compare
MMP_RS00060 +0.8 1.0 3-dehydroquinate synthase II compare
MMP_RS08235 +0.8 2.4 hypothetical protein compare
MMP_RS07815 +0.7 1.2 DUF2120 domain-containing protein compare
MMP_RS04360 +0.7 2.3 hypothetical protein compare
MMP_RS07835 +0.7 2.8 TldD/PmbA family protein compare
MMP_RS06185 +0.7 3.3 thermonuclease family protein compare
MMP_RS08775 +0.7 2.0 methanogenesis marker 9 domain-containing protein compare
MMP_RS02905 +0.7 2.3 2-thiouracil desulfurase family protein compare
MMP_RS00155 +0.7 1.8 heavy metal-binding domain-containing protein compare
MMP_RS06140 +0.7 1.5 radical SAM protein compare
MMP_RS09050 +0.7 0.9 CAP domain-containing protein compare
MMP_RS05415 +0.6 2.2 DUF22 domain-containing protein compare
MMP_RS00450 +0.6 1.4 4Fe-4S binding protein compare
MMP_RS00700 +0.6 1.9 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS07890 +0.6 1.1 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS00185 +0.6 4.2 potassium channel protein compare
MMP_RS07125 +0.6 1.7 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS03890 +0.6 1.7 DUF2540 domain-containing protein compare
MMP_RS03465 +0.6 0.9 adenine phosphoribosyltransferase compare
MMP_RS08315 +0.6 1.0 S-methyl-5-thioribose-1-phosphate isomerase compare
MMP_RS03910 +0.6 1.8 hypothetical protein compare
MMP_RS08630 +0.6 2.4 archaellar assembly protein FlaJ compare
MMP_RS06075 +0.6 2.0 class I SAM-dependent methyltransferase compare
MMP_RS00565 +0.6 2.0 CBS domain-containing protein compare
MMP_RS08160 +0.6 1.7 EamA family transporter compare
MMP_RS00400 +0.6 2.4 tributyrin esterase compare
MMP_RS04735 +0.6 2.2 tautomerase family protein compare
MMP_RS05355 +0.5 0.5 hypothetical protein compare
MMP_RS06190 +0.5 2.9 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO compare
MMP_RS01240 +0.5 0.5 7-cyano-7-deazaguanine synthase QueC compare
MMP_RS01765 +0.5 2.5 HIT family protein compare
MMP_RS01150 +0.5 1.4 aldo/keto reductase compare
MMP_RS03440 +0.5 0.7 MoaD/ThiS family protein compare
MMP_RS06490 +0.5 1.6 hypothetical protein compare
MMP_RS06530 +0.5 1.5 bifunctional hexulose-6-phosphate synthase/ribonuclease regulator compare
MMP_RS06250 +0.5 1.5 hypothetical protein compare
MMP_RS06765 +0.5 1.9 flap endonuclease-1 compare
MMP_RS00090 +0.5 1.3 CoA-binding protein compare
MMP_RS05365 +0.5 1.5 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMP_RS07345 +0.5 1.3 glycine synthesis protein GlyXL (from data) compare
MMP_RS00080 +0.5 0.9 RecB-family nuclease compare
MMP_RS02590 +0.5 1.6 low molecular weight phosphatase family protein compare
MMP_RS09060 +0.5 3.2 hypothetical protein compare
MMP_RS02725 +0.5 2.0 molybdate ABC transporter permease subunit compare
MMP_RS03090 +0.5 2.0 cation:proton antiporter compare
MMP_RS03270 +0.5 1.0 ADP-ribosylglycohydrolase family protein compare
MMP_RS03385 +0.5 0.5 cation diffusion facilitator family transporter compare
MMP_RS04060 +0.5 1.2 hypothetical protein compare
MMP_RS04965 +0.5 2.4 thioredoxin family protein compare
MMP_RS08090 +0.5 1.3 hypothetical protein compare
MMP_RS07560 +0.5 1.8 prefoldin subunit alpha compare
MMP_RS06910 +0.5 2.0 RlmF-related methyltransferase compare
MMP_RS03065 +0.5 0.8 AzlC family ABC transporter permease compare
MMP_RS03785 +0.5 1.3 cupin domain-containing protein compare
MMP_RS05945 +0.5 1.8 CBS domain-containing protein compare
MMP_RS08670 +0.5 2.0 metallophosphoesterase compare
MMP_RS08130 +0.5 2.2 IGHMBP2 family helicase compare
MMP_RS00650 +0.5 2.1 ABC transporter ATP-binding protein compare
MMP_RS02380 +0.4 1.8 ATP-binding protein compare
MMP_RS00545 +0.4 1.0 XRE family transcriptional regulator compare
MMP_RS08280 +0.4 0.8 proteasome assembly chaperone family protein compare
MMP_RS07840 +0.4 1.3 ribonuclease III compare
MMP_RS07805 +0.4 1.5 ABC transporter permease compare
MMP_RS05665 +0.4 1.9 phosphate ABC transporter permease subunit PstC compare
MMP_RS01630 +0.4 1.4 N-glycosylase/DNA lyase compare
MMP_RS08205 +0.4 1.4 stage II sporulation protein M compare
MMP_RS00795 +0.4 1.7 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS06860 +0.4 0.9 4Fe-4S binding protein compare
MMP_RS02705 +0.4 1.7 formylmethanofuran dehydrogenase subunit B compare
MMP_RS07765 +0.4 1.9 sodium:alanine symporter family protein compare
MMP_RS08230 +0.4 1.6 50S ribosomal protein L11 methyltransferase compare
MMP_RS01850 +0.4 1.8 phosphate ABC transporter substrate-binding protein compare
MMP_RS08325 +0.4 1.7 hypothetical protein compare
MMP_RS03150 +0.4 1.6 phosphoglycerate mutase compare
MMP_RS00540 +0.4 1.5 PLP-dependent aminotransferase family protein compare
MMP_RS02265 +0.4 0.9 nitroreductase family protein compare
MMP_RS01080 +0.4 1.6 DUF2202 domain-containing protein compare
MMP_RS00435 +0.4 2.4 CPBP family intramembrane metalloprotease compare
MMP_RS02880 +0.4 1.9 AmmeMemoRadiSam system radical SAM enzyme compare
MMP_RS08285 +0.4 2.0 serine/threonine protein kinase compare
MMP_RS01455 +0.4 1.6 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS00085 +0.4 1.9 DNA cytosine methyltransferase compare
MMP_RS08275 +0.4 2.4 hypothetical protein compare
MMP_RS02300 +0.4 1.6 NAD(P)H-dependent oxidoreductase compare
MMP_RS06590 +0.4 0.9 GNAT family N-acetyltransferase compare
MMP_RS08770 +0.4 1.5 hypothetical protein compare
MMP_RS08265 +0.4 0.8 rubrerythrin compare
MMP_RS01155 +0.4 1.4 XRE family transcriptional regulator compare
MMP_RS03225 +0.4 1.8 acetolactate decarboxylase compare
MMP_RS04105 +0.4 1.4 MarR family transcriptional regulator compare
MMP_RS06990 +0.4 1.8 CatB-related O-acetyltransferase compare
MMP_RS06335 +0.4 0.8 HAD family hydrolase compare
MMP_RS01250 +0.4 1.0 tRNA (guanine(26)-N(2))-dimethyltransferase compare
MMP_RS07905 +0.4 1.3 DUF3343 domain-containing protein compare
MMP_RS05905 +0.4 1.4 undecaprenyl-diphosphate phosphatase compare
MMP_RS07085 +0.4 1.6 ribonuclease HII compare
MMP_RS07855 +0.4 1.8 class I SAM-dependent methyltransferase compare
MMP_RS00105 +0.4 1.6 hypothetical protein compare
MMP_RS07185 +0.4 2.4 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS08990 +0.4 1.8 hypothetical protein compare
MMP_RS07895 +0.4 1.1 cytochrome c compare
MMP_RS04170 +0.4 2.1 DUF362 domain-containing protein compare
MMP_RS07335 +0.4 1.2 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMP_RS04020 +0.4 1.0 hypothetical protein compare
MMP_RS00905 +0.4 0.9 phenylacetate--CoA ligase compare
MMP_RS08245 +0.3 1.4 DUF4013 domain-containing protein compare
MMP_RS08390 +0.3 1.3 DUF5400 domain-containing protein compare
MMP_RS01105 +0.3 1.0 hypothetical protein compare
MMP_RS08610 +0.3 1.5 flagellar protein F compare
MMP_RS07910 +0.3 1.3 NAD(P)H-hydrate dehydratase compare
MMP_RS01060 +0.3 1.8 calcium/sodium antiporter compare
MMP_RS01090 +0.3 1.4 ABC transporter substrate-binding protein compare
MMP_RS01120 +0.3 1.2 permease compare
MMP_RS07680 +0.3 0.9 DUF366 family protein compare
MMP_RS08850 +0.3 2.2 hypothetical protein compare
MMP_RS05990 +0.3 1.6 DsrE family protein compare
MMP_RS03900 +0.3 1.1 minichromosome maintenance protein MCM compare
MMP_RS03325 +0.3 1.0 hypothetical protein compare
MMP_RS04530 +0.3 1.6 ABC transporter permease compare
MMP_RS05685 +0.3 1.2 winged helix-turn-helix domain-containing protein compare
MMP_RS08490 +0.3 2.2 hypothetical protein compare
MMP_RS06155 +0.3 0.9 DUF4186 domain-containing protein compare
MMP_RS04740 +0.3 1.0 DUF473 domain-containing protein compare
MMP_RS01370 +0.3 1.8 acetate--CoA ligase family protein compare
MMP_RS00570 +0.3 0.7 protein-L-isoaspartate O-methyltransferase compare
MMP_RS01635 +0.3 1.0 thiamine pyrophosphate-dependent enzyme compare
MMP_RS05535 +0.3 0.6 hypothetical protein compare
MMP_RS06745 +0.3 1.4 DUF2119 domain-containing protein compare
MMP_RS03280 +0.3 1.0 pyridoxamine 5'-phosphate oxidase family protein compare
MMP_RS08685 +0.3 1.4 hypothetical protein compare
MMP_RS02770 +0.3 1.2 hypothetical protein compare
MMP_RS01100 +0.3 0.4 ABC transporter ATP-binding protein compare
MMP_RS02290 +0.3 1.2 MBL fold metallo-hydrolase compare
MMP_RS01440 +0.3 1.1 NAAT family transporter compare
MMP_RS07800 +0.3 1.1 ATP-binding cassette domain-containing protein compare
MMP_RS00385 +0.3 1.2 P-II family nitrogen regulator compare
MMP_RS00960 +0.3 0.7 iron export ABC transporter permease subunit FetB compare
MMP_RS08260 +0.3 1.1 DUF99 family protein compare
MMP_RS03575 +0.3 1.4 ECF transporter S component compare
MMP_RS02260 +0.3 1.4 lactate utilization protein compare
MMP_RS00800 +0.3 1.6 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS01580 +0.3 1.3 PQQ-binding-like beta-propeller repeat protein compare
MMP_RS00335 +0.3 0.5 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMP_RS04800 +0.3 1.2 chemotaxis protein CheW compare
MMP_RS01210 +0.3 0.9 sodium:solute symporter compare
MMP_RS04805 +0.3 1.6 chemotaxis response regulator protein-glutamate methylesterase compare
MMP_RS09065 +0.3 1.6 hypothetical protein compare
MMP_RS08085 +0.3 1.7 hypothetical protein compare
MMP_RS08640 +0.3 1.2 TIM barrel protein compare
MMP_RS08415 +0.3 0.7 radical SAM protein compare
MMP_RS08980 +0.3 1.0 hypothetical protein compare
MMP_RS02445 +0.3 1.5 putative DNA binding domain-containing protein compare
MMP_RS05825 +0.3 0.9 peptidyl-prolyl cis-trans isomerase compare
MMP_RS01435 +0.3 0.9 DMT family transporter compare
MMP_RS03490 +0.3 0.5 DUF2115 domain-containing protein compare
MMP_RS04165 +0.3 0.6 TetR/AcrR family transcriptional regulator compare
MMP_RS03670 +0.3 0.7 DUF1890 domain-containing protein compare
MMP_RS04150 +0.3 1.5 MFS transporter compare
MMP_RS00660 +0.3 1.4 alkaline phosphatase family protein compare
MMP_RS07590 +0.3 1.3 hypothetical protein compare
MMP_RS02910 +0.3 0.9 ABC transporter substrate-binding protein compare
MMP_RS05695 +0.3 0.9 phospholipase D-like domain-containing protein compare
MMP_RS06225 +0.3 1.0 DNA double-strand break repair nuclease NurA compare
MMP_RS08570 +0.3 1.2 coenzyme F420-0:L-glutamate ligase compare
MMP_RS06735 +0.3 0.9 class I SAM-dependent rRNA methyltransferase compare
MMP_RS00630 +0.3 0.9 ECF transporter S component compare
MMP_RS08480 +0.3 1.3 molybdate ABC transporter substrate-binding protein compare
MMP_RS01160 +0.3 0.9 DMT family transporter compare
MMP_RS06545 +0.2 0.7 ferredoxin family protein compare
MMP_RS05480 +0.2 1.6 NAD(P)/FAD-dependent oxidoreductase compare
MMP_RS07715 +0.2 1.5 YfcE family phosphodiesterase compare
MMP_RS05085 +0.2 1.2 AAA family ATPase compare
MMP_RS06540 +0.2 0.4 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMP_RS07150 +0.2 0.8 MTH895/ArsE family thioredoxin-like protein compare
MMP_RS00395 +0.2 0.4 MGMT family protein compare
MMP_RS00535 +0.2 0.4 TIGR00375 family protein compare
MMP_RS02825 +0.2 1.2 mechanosensitive ion channel family protein compare
MMP_RS06500 +0.2 1.1 ATP-binding protein compare
MMP_RS00625 +0.2 0.7 hypothetical protein compare
MMP_RS07140 +0.2 1.4 TIGR00341 family protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in nutrient t1 experiments

For nutrient t1 Sodium acetate across organisms