| | gene | name | fitness | t score | description | |
|---|
| b1192 | ldcA | -10.4 | -5.1 | L,D-carboxypeptidase A (NCBI) | compare |
| b4013 | metA | -8.7 | -3.9 | homoserine O-succinyltransferase (NCBI) | compare |
| b0242 | proB | -8.5 | -4.6 | gamma-glutamyl kinase (NCBI) | compare |
| b2020 | hisD | -8.4 | -5.0 | histidinol dehydrogenase (NCBI) | compare |
| b1261 | trpB | -8.4 | -2.2 | tryptophan synthase subunit beta (NCBI) | compare |
| b0074 | leuA | -8.2 | -5.7 | 2-isopropylmalate synthase (NCBI) | compare |
| b0243 | proA | -8.1 | -5.6 | gamma-glutamyl phosphate reductase (NCBI) | compare |
| b3770 | ilvE | -8.1 | -5.6 | branched-chain amino acid aminotransferase (NCBI) | compare |
| b3172 | argG | -8.1 | -5.6 | argininosuccinate synthase (NCBI) | compare |
| b0032 | carA | -7.9 | -4.3 | carbamoyl-phosphate synthase small subunit (NCBI) | compare |
| b0004 | thrC | -7.9 | -5.5 | threonine synthase (NCBI) | compare |
| b1817 | manX | -7.8 | -4.2 | fused mannose-specific PTS enzymes: IIA component/IIB component (NCBI) | conserved |
| b3956 | ppc | -7.7 | -16.5 | phosphoenolpyruvate carboxylase (NCBI) | compare |
| b2021 | hisC | -7.6 | -3.6 | histidinol-phosphate aminotransferase (NCBI) | compare |
| b2312 | purF | -7.4 | -4.3 | amidophosphoribosyltransferase (NCBI) | compare |
| b0033 | carB | -7.4 | -16.5 | carbamoyl-phosphate synthase large subunit (NCBI) | compare |
| b2762 | cysH | -7.2 | -5.0 | phosphoadenosine phosphosulfate reductase (NCBI) | compare |
| b1281 | pyrF | -7.2 | -2.6 | orotidine 5'-phosphate decarboxylase (NCBI) | compare |
| b4388 | serB | -7.2 | -4.5 | 3-phosphoserine phosphatase (NCBI) | compare |
| b2763 | cysI | -7.1 | -4.9 | sulfite reductase, beta subunit, NAD(P)-binding, heme-binding (NCBI) | compare |
| b3389 | aroB | -7.1 | -11.9 | 3-dehydroquinate synthase (NCBI) | compare |
| b1818 | manY | -7.0 | -1.8 | mannose-specific enzyme IIC component of PTS (NCBI) | compare |
| b2022 | hisB | -7.0 | -4.5 | imidazoleglycerolphosphate dehydratase and histidinol-phosphate phosphatase (VIMSS) | compare |
| b3773 | ilvY | -6.9 | -12.2 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0720 | gltA | -6.9 | -4.5 | citrate synthase (NCBI) | compare |
| b2557 | purL | -6.9 | -4.8 | phosphoribosylformylglycinamidine synthase (NCBI) | compare |
| b0522 | purK | -6.9 | -4.8 | phosphoribosylaminoimidazole carboxylase (NCBI) | compare |
| b0523 | purE | -6.9 | -2.5 | phosphoribosylaminoimidazole carboxylase catalytic subunit (NCBI) | compare |
| b3957 | argE | -6.8 | -13.5 | acetylornithine deacetylase (NCBI) | compare |
| b1819 | manZ | -6.8 | -3.2 | mannose-specific enzyme IID component of PTS (NCBI) | conserved |
| b2025 | hisF | -6.7 | -2.8 | imidazole glycerol phosphate synthase subunit HisF (NCBI) | compare |
| b3772 | ilvA | -6.7 | -14.1 | threonine dehydratase (NCBI) | compare |
| b2818 | argA | -6.7 | -9.0 | N-acetylglutamate synthase (NCBI) | compare |
| b2814 | metZ | -6.6 | -1.0 | tRNA-Met (NCBI) | compare |
| b4006 | purH | -6.6 | -14.8 | bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (NCBI) | compare |
| b0737 | tolQ | -6.6 | -3.4 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0386 | proC | -6.6 | -4.4 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b2499 | purM | -6.5 | -3.5 | phosphoribosylaminoimidazole synthetase (NCBI) | compare |
| b4245 | pyrB | -6.5 | -7.7 | aspartate carbamoyltransferase catalytic subunit (NCBI) | compare |
| b1693 | aroD | -6.5 | -3.9 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b2329 | aroC | -6.4 | -4.1 | chorismate synthase (NCBI) | compare |
| b1563 | relE | -6.4 | -1.7 | Qin prophage; toxin of the RelE-RelB toxin-antitoxin system (NCBI) | compare |
| b4005 | purD | -6.4 | -11.9 | phosphoribosylamine--glycine ligase (NCBI) | compare |
| b3774 | ilvC | -6.4 | -16.1 | ketol-acid reductoisomerase (NCBI) | compare |
| b0739 | tolA | -6.3 | -4.2 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b3642 | pyrE | -6.2 | -3.3 | orotate phosphoribosyltransferase (NCBI) | compare |
| b3281 | aroE | -6.0 | -17.4 | dehydroshikimate reductase, NAD(P)-binding (NCBI) | compare |
| b3781 | trxA | -6.0 | -3.0 | thioredoxin 1 (VIMSS) | compare |
| b0071 | leuD | -6.0 | -6.2 | isopropylmalate isomerase small subunit (NCBI) | compare |
| b0072 | leuC | -6.0 | -9.3 | isopropylmalate isomerase large subunit (NCBI) | compare |
| b3960 | argH | -5.9 | -13.6 | argininosuccinate lyase (NCBI) | compare |
| b3941 | metF | -5.9 | -7.7 | 5,10-methylenetetrahydrofolate reductase (NCBI) | compare |
| b0001 | thrL | -5.9 | -1.3 | thr operon leader peptide (NCBI) | compare |
| b3761 | trpT | -5.9 | -0.9 | tRNA-Trp (NCBI) | compare |
| b1920 | fliY | -5.8 | -1.7 | cystine transporter subunit (NCBI) | compare |
| b3237 | argR | -5.8 | -5.2 | arginine repressor (NCBI) | compare |
| b1865 | nudB | -5.8 | -1.5 | dATP pyrophosphohydrolase (NCBI) | compare |
| b0738 | tolR | -5.7 | -3.6 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0908 | aroA | -5.7 | -11.4 | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | compare |
| b2024 | hisA | -5.6 | -1.2 | N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'- phosphoribosyl)-4-imidazolecarboxamide isomerase (VIMSS) | compare |
| b4585 | sroB | -5.6 | -0.8 | Novel sRNA, function unknown (RefSeq) | compare |
| b3939 | metB | -5.5 | -8.6 | cystathionine gamma-synthase (NCBI) | compare |
| b3771 | ilvD | -5.5 | -11.1 | dihydroxy-acid dehydratase (NCBI) | compare |
| b0002 | thrA | -5.5 | -11.7 | bifunctional aspartokinase I/homeserine dehydrogenase I (NCBI) | compare |
| b0003 | thrB | -5.4 | -6.4 | homoserine kinase (NCBI) | compare |
| b2600 | tyrA | -5.4 | -5.4 | fused chorismate mutase T/prephenate dehydrogenase (NCBI) | compare |
| b3341 | rpsG | -5.4 | -1.4 | 30S ribosomal protein S7 (NCBI) | compare |
| b0907 | serC | -5.4 | -4.6 | phosphoserine aminotransferase (NCBI) | compare |
| b4431 | rprA | -5.3 | -1.6 | Positive regulatory sRNA for RpoS translation; non-essential gene (RefSeq) | compare |
| b1103 | ycfF | -5.3 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b2259 | pmrD | -5.3 | -0.8 | polymyxin resistance protein B (VIMSS) | compare |
| b2750 | cysC | -5.2 | -4.1 | adenylylsulfate kinase (NCBI) | compare |
| b1595 | ynfL | -5.2 | -1.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2839 | lysR | -5.2 | -4.9 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2838 | lysA | -5.1 | -7.2 | diaminopimelate decarboxylase, PLP-binding (NCBI) | compare |
| b3390 | aroK | -5.1 | -1.9 | shikimate kinase I (NCBI) | compare |
| b0740 | tolB | -5.0 | -8.3 | translocation protein TolB precursor (NCBI) | compare |
| b1613 | manA | -5.0 | -2.0 | mannose-6-phosphate isomerase (VIMSS) | compare |
| b2913 | serA | -5.0 | -6.8 | D-3-phosphoglycerate dehydrogenase (NCBI) | compare |
| b0945 | pyrD | -5.0 | -13.1 | dihydroorotate dehydrogenase (NCBI) | compare |
| b0817 | mntR | -5.0 | -3.5 | DNA-binding transcriptional regulator of mntH (NCBI) | compare |
| b1205 | ychH | -5.0 | -1.0 | predicted inner membrane protein (NCBI) | compare |
| b2433 | b2433 | -4.9 | -2.6 | orf, hypothetical protein (VIMSS) | compare |
| b0145 | dksA | -4.9 | -2.4 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b3958 | argC | -4.9 | -8.6 | N-acetyl-gamma-glutamyl-phosphate reductase (NCBI) | compare |
| b2279 | nuoK | -4.9 | -1.5 | NADH dehydrogenase subunit K (NCBI) | compare |
| b1434 | ydcN | -4.9 | -1.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1942 | fliJ | -4.8 | -1.0 | flagellar biosynthesis chaperone (NCBI) | compare |
| b1150 | ymfR | -4.8 | -0.7 | e14 prophage; predicted protein (NCBI) | compare |
| b1183 | umuD | -4.8 | -1.0 | DNA polymerase V, subunit D (NCBI) | compare |
| b1262 | trpC | -4.8 | -5.4 | N-(5-phosphoribosyl)anthranilate isomerase and indole-3-glycerolphosphate synthetase (VIMSS) | compare |
| b4699 | fnrS | -4.7 | -0.7 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b0014 | dnaK | -4.7 | -1.6 | molecular chaperone DnaK (NCBI) | compare |
| b3613 | yibP | -4.7 | -7.0 | putative membrane protein (VIMSS) | compare |
| b2764 | cysJ | -4.7 | -8.0 | sulfite reductase, alpha subunit, flavoprotein (NCBI) | compare |
| b3368 | cysG | -4.6 | -12.3 | fused siroheme synthase 1,3-dimethyluroporphyriongen III dehydrogenase and siroheme ferrochelatase/uroporphyrinogen methyltransferase (NCBI) | compare |
| b1550 | b1550 | -4.6 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b1062 | pyrC | -4.6 | -8.2 | dihydroorotase (NCBI) | compare |
| b1524 | yneH | -4.5 | -0.7 | predicted glutaminase (NCBI) | compare |
| b4603 | rseX | -4.5 | -0.7 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b0073 | leuB | -4.5 | -6.2 | 3-isopropylmalate dehydrogenase (VIMSS) | compare |
| b2414 | cysK | -4.4 | -6.4 | cysteine synthase A, O-acetylserine sulfhydrolase A subunit (NCBI) | compare |
| b1293 | sapB | -4.3 | -1.3 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1260 | trpA | -4.3 | -2.5 | tryptophan synthase subunit alpha (NCBI) | compare |
| b3959 | argB | -4.3 | -6.0 | acetylglutamate kinase (RefSeq) | compare |
| b1070 | flgN | -4.2 | -0.9 | export chaperone for FlgK and FlgL (NCBI) | compare |
| b1361 | ydaW | -4.2 | -0.6 | orf, hypothetical protein (VIMSS) | compare |
| b2479 | gcvR | -4.2 | -6.7 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b2023 | hisH | -4.2 | -3.6 | imidazole glycerol phosphate synthase subunit HisH (NCBI) | compare |
| b2620 | smpB | -4.2 | -1.2 | SsrA-binding protein (NCBI) | compare |
| b0683 | fur | -4.2 | -1.1 | ferric uptake regulator (NCBI) | compare |
| b2501 | ppk | -4.2 | -9.0 | polyphosphate kinase (NCBI) | compare |
| b1861 | ruvA | -4.1 | -1.4 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b2939 | yqgB | -4.1 | -0.8 | predicted protein (RefSeq) | compare |
| b2019 | hisG | -4.0 | -2.9 | ATP phosphoribosyltransferase (NCBI) | compare |
| b4596 | yciZ | -4.0 | -0.8 | hypothetical protein (RefSeq) | compare |
| b0741 | pal | -3.9 | -4.6 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b3839 | tatC | -3.9 | -7.9 | TatABCE protein translocation system subunit (NCBI) | compare |
| b1291 | sapD | -3.9 | -1.4 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2026 | hisI | -3.9 | -3.6 | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein (NCBI) | compare |
| b2576 | srmB | -3.8 | -4.1 | ATP-dependent RNA helicase (NCBI) | compare |
| b0439 | lon | -3.8 | -7.3 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b3764 | yifE | -3.8 | -3.7 | hypothetical protein (NCBI) | compare |
| b2599 | pheA | -3.8 | -5.0 | fused chorismate mutase P/prephenate dehydratase (NCBI) | compare |
| b0627 | tatE | -3.7 | -1.7 | twin arginine translocase protein E (NCBI) | compare |
| b1185 | dsbB | -3.7 | -3.3 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b2168 | fruK | -3.7 | -0.9 | 1-phosphofructokinase (NCBI) | compare |
| b1232 | purU | -3.6 | -3.9 | formyltetrahydrofolate deformylase (NCBI) | compare |
| b4695 | ykgT | -3.6 | -1.7 | no description | compare |
| b0912 | ihfB | -3.6 | -2.2 | integration host factor subunit beta (NCBI) | compare |
| b1726 | yniB | -3.6 | -0.9 | predicted inner membrane protein (NCBI) | compare |
| b4568 | ytjA | -3.6 | -1.1 | predicted protein (RefSeq) | compare |
| b1882 | cheY | -3.5 | -0.5 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b3204 | ptsN | -3.5 | -5.6 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b3500 | gor | -3.4 | -1.4 | glutathione reductase (NCBI) | compare |
| b3026 | qseC | -3.4 | -2.4 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b1600 | mdtJ | -3.4 | -4.3 | multidrug efflux system transporter (NCBI) | compare |
| b2579 | yfiD | -3.3 | -2.0 | pyruvate formate lyase subunit (NCBI) | compare |
| b2659 | b2659 | -3.3 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b1259 | yciG | -3.3 | -0.8 | orf, hypothetical protein (VIMSS) | compare |
| b0300 | ykgA | -3.3 | -2.2 | putative ARAC-type regulatory protein (VIMSS) | compare |
| b2080 | b2080 | -3.2 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b3190 | yrbA | -3.2 | -3.0 | orf, hypothetical protein (VIMSS) | compare |
| b3008 | metC | -3.2 | -5.1 | cystathionine beta-lyase (NCBI) | compare |
| b3935 | priA | -3.2 | -2.2 | primosome assembly protein PriA (NCBI) | compare |
| b0232 | yafN | -3.1 | -0.7 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b4503 | yafF | -3.1 | -0.7 | no description | compare |
| b3868 | glnG | -3.1 | -4.4 | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | compare |
| b0447 | ybaO | -3.1 | -3.0 | putative LRP-like transcriptional regulator (VIMSS) | compare |
| b4146 | yjeK | -3.1 | -2.0 | predicted lysine aminomutase (NCBI) | compare |
| b1286 | rnb | -3.1 | -2.7 | exoribonuclease II (NCBI) | compare |
| b0142 | folK | -3.0 | -0.4 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b2376 | ypdI | -3.0 | -3.6 | predicted lipoprotein involved in colanic acid biosynthesis (NCBI) | compare |
| b4214 | cysQ | -3.0 | -5.9 | PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase (NCBI) | compare |
| b4202 | rpsR | -3.0 | -1.2 | 30S ribosomal protein S18 (NCBI) | compare |
| b4520 | ymgF | -3.0 | -1.1 | hypothetical protein (NCBI) | compare |
| b0200 | gmhB | -3.0 | -1.2 | hypothetical protein (NCBI) | compare |
| b3790 | rffC | -2.9 | -3.5 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b3626 | rfaJ | -2.9 | -9.5 | UDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase (NCBI) | compare |
| b2049 | cpsB | -2.9 | -2.8 | mannose-1-phosphate guanyltransferase (NCBI) | compare |
| b1712 | ihfA | -2.7 | -1.0 | integration host factor subunit alpha (NCBI) | compare |
| b2476 | purC | -2.7 | -1.9 | phosphoribosylaminoimidazole-succinocarboxamidesynthase (NCBI) | compare |
| b1438 | ydcQ | -2.7 | -1.9 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b4402 | yjjY | -2.7 | -0.6 | hypothetical protein (NCBI) | compare |
| b0585 | fes | -2.7 | -3.6 | enterobactin/ferric enterobactin esterase (NCBI) | compare |
| b1709 | btuD | -2.6 | -0.5 | vitamin B12-transporter ATPase (NCBI) | compare |
| b2456 | cchB | -2.6 | -1.9 | predicted carboxysome structural protein, ethanolamine utilization protein (NCBI) | compare |
| b3672 | ivbL | -2.6 | -2.5 | ilvB operon leader peptide (NCBI) | compare |
| b3916 | pfkA | -2.6 | -1.8 | 6-phosphofructokinase (NCBI) | compare |
| b3164 | pnp | -2.5 | -2.1 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b4411 | ecnB | -2.5 | -1.3 | entericidin B membrane lipoprotein (NCBI) | compare |
| b0890 | ftsK | -2.5 | -6.7 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b2751 | cysN | -2.5 | -4.4 | sulfate adenylyltransferase subunit 1 (NCBI) | compare |
| b0888 | trxB | -2.5 | -2.6 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b1290 | sapF | -2.5 | -1.5 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2699 | recA | -2.5 | -1.2 | recombinase A (NCBI) | compare |
| b1125 | potB | -2.4 | -2.3 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b1285 | gmr | -2.4 | -3.1 | modulator of Rnase II stability (NCBI) | compare |
| b4541 | yehK | -2.4 | -2.4 | hypothetical protein (NCBI) | compare |
| b0564 | appY | -2.4 | -0.5 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b2340 | sixA | -2.4 | -3.0 | phosphohistidine phosphatase (NCBI) | compare |
| b1620 | malI | -2.4 | -1.9 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2318 | truA | -2.3 | -2.3 | tRNA pseudouridine synthase A (NCBI) | compare |
| b0803 | ybiI | -2.3 | -1.4 | hypothetical protein (NCBI) | compare |
| b0798 | ybiA | -2.3 | -1.4 | hypothetical protein (NCBI) | compare |
| b1692 | ydiB | -2.3 | -2.5 | quinate/shikimate 5-dehydrogenase, NAD(P)-binding (NCBI) | compare |
| b2432 | yfeY | -2.2 | -1.2 | hypothetical protein (NCBI) | compare |
| b2790 | yqcA | -2.2 | -2.2 | flavodoxin (NCBI) | compare |
| b4650 | yibS | -2.2 | -1.5 | no description | compare |
| b0630 | lipB | -2.2 | -0.9 | protein of lipoate biosynthesis (VIMSS) | compare |
| b2498 | upp | -2.2 | -2.3 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b3619 | rfaD | -2.2 | -3.6 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b0592 | fepB | -2.1 | -4.7 | iron-enterobactin transporter subunit (NCBI) | compare |
| b1332 | ynaJ | -2.1 | -0.4 | predicted inner membrane protein (NCBI) | compare |
| b4184 | yjfL | -2.1 | -5.4 | conserved inner membrane protein (NCBI) | compare |
| b2807 | ygdD | -2.1 | -2.1 | conserved inner membrane protein (NCBI) | compare |
| b0460 | hha | -2.1 | -2.7 | modulator of gene expression, with H-NS (NCBI) | compare |
| b4653 | yicT | -2.1 | -1.9 | no description | compare |
| b0149 | mrcB | -2.1 | -7.0 | penicillin-binding protein 1b (NCBI) | compare |
| b3290 | trkA | -2.1 | -1.4 | potassium transporter peripheral membrane component (NCBI) | compare |