Experiment set3S223 for Rhodanobacter sp000427505 FW510-R12

200 most important genes:

gene	name	fitness	t score	description
LRK53_RS05125		-3.6	-7.3	potassium transporter Kup
LRK53_RS06175		-3.1	-3.0	acylphosphatase
LRK53_RS14790		-2.9	-1.9	5-(carboxyamino)imidazole ribonucleotide mutase
LRK53_RS07510		-2.8	-6.4	TonB-dependent siderophore receptor
LRK53_RS13180		-2.7	-2.5	hypothetical protein
LRK53_RS14785		-2.6	-1.8	5-(carboxyamino)imidazole ribonucleotide synthase
LRK53_RS11155		-2.4	-2.4	glutamine-hydrolyzing GMP synthase
LRK53_RS04265		-2.4	-4.8	phosphoribosylaminoimidazolesuccinocarboxamide synthase
LRK53_RS16900		-2.4	-4.4	ribose-5-phosphate isomerase RpiA
LRK53_RS09520		-2.2	-2.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
LRK53_RS11790		-2.1	-2.0	cbb3-type cytochrome c oxidase subunit 3
LRK53_RS03715		-2.1	-1.4	cell division ATP-binding protein FtsE
LRK53_RS09265		-2.0	-1.4	GntR family transcriptional regulator
LRK53_RS12250		-2.0	-8.2	Mth938-like domain-containing protein
LRK53_RS05870		-2.0	-11.3	ATP-binding protein
LRK53_RS05865		-2.0	-3.5	response regulator transcription factor
LRK53_RS11455		-1.9	-3.4	NfuA family Fe-S biogenesis protein
LRK53_RS14770		-1.8	-1.8	SDR family NAD(P)-dependent oxidoreductase
LRK53_RS03695		-1.8	-10.1	glutamate--cysteine ligase
LRK53_RS02580		-1.8	-4.9	c-type cytochrome
LRK53_RS13565		-1.7	-1.6	isocitrate dehydrogenase
LRK53_RS16520		-1.7	-3.8	HAMP domain-containing histidine kinase
LRK53_RS17570		-1.7	-2.2	alpha/beta hydrolase
LRK53_RS05615		-1.7	-2.9	WGR domain-containing protein
LRK53_RS03635		-1.6	-1.5	50S ribosomal protein L33
LRK53_RS17625		-1.6	-1.5	benenodin family lasso peptide
LRK53_RS05760		-1.6	-1.2	chemotaxis protein CheW
LRK53_RS05200		-1.5	-2.7	type IV pilus modification protein PilV
LRK53_RS13415		-1.5	-1.9	DUF2059 domain-containing protein
LRK53_RS03745		-1.4	-7.9	peptidoglycan DD-metalloendopeptidase family protein
LRK53_RS04185		-1.4	-4.1	dihydrolipoyllysine-residue acetyltransferase
LRK53_RS01325		-1.4	-1.9	magnesium-translocating P-type ATPase
LRK53_RS04190		-1.4	-3.8	dihydrolipoyl dehydrogenase
LRK53_RS09595		-1.3	-1.5	hypothetical protein
LRK53_RS08910		-1.3	-2.4	endolytic transglycosylase MltG
LRK53_RS16290		-1.3	-2.4	division/cell wall cluster transcriptional repressor MraZ
LRK53_RS06715		-1.3	-2.1	[protein-PII] uridylyltransferase
LRK53_RS17130		-1.3	-12.4	energy transducer TonB
LRK53_RS13020		-1.3	-1.5	sulfur transferase domain-containing protein
LRK53_RS14670		-1.3	-1.7	purine-nucleoside phosphorylase
LRK53_RS13625		-1.3	-0.9	carbon storage regulator CsrA
LRK53_RS02285		-1.3	-1.5	oxygen-dependent coproporphyrinogen oxidase
LRK53_RS18860		-1.3	-2.6	hypothetical protein
LRK53_RS05295		-1.3	-11.5	phosphoribosylformylglycinamidine synthase
LRK53_RS13895		-1.3	-1.1	histone H1-like repetitive region-containing protein
LRK53_RS03165		-1.3	-2.3	homoserine dehydrogenase
LRK53_RS15880		-1.3	-2.6	IS5 family transposase
LRK53_RS04075		-1.2	-9.4	pyruvate dehydrogenase (acetyl-transferring), homodimeric type
LRK53_RS04390		-1.2	-1.7	glycosyltransferase family 2 protein
LRK53_RS06850		-1.2	-1.1	protein translocase subunit SecD
LRK53_RS07450		-1.2	-1.1	50S ribosomal protein L19
LRK53_RS11565		-1.2	-2.4	nucleoside diphosphate kinase regulator
LRK53_RS07490		-1.1	-3.3	phytoene synthase
LRK53_RS09435		-1.1	-0.7	malate dehydrogenase
LRK53_RS11805		-1.1	-0.7	heavy metal translocating P-type ATPase
LRK53_RS09830		-1.1	-1.6	phosphoglycerate mutase
LRK53_RS05725		-1.1	-6.5	glutathione synthase
LRK53_RS09240		-1.0	-1.6	DUF4386 domain-containing protein
LRK53_RS08430		-1.0	-0.9	30S ribosomal protein THX
LRK53_RS07695		-1.0	-2.4	enoyl-CoA hydratase-related protein
LRK53_RS18120		-1.0	-1.6	energy transducer TonB
LRK53_RS03720		-1.0	-2.6	permease-like cell division protein FtsX
LRK53_RS09730		-1.0	-2.3	ATP-dependent Clp protease ATP-binding subunit ClpA
LRK53_RS17340		-1.0	-1.9	arginase
LRK53_RS05370		-1.0	-1.9	hypothetical protein
LRK53_RS10085		-1.0	-1.2	TIGR04282 family arsenosugar biosynthesis glycosyltransferase
LRK53_RS12415		-1.0	-3.3	NAD-dependent protein deacetylase
LRK53_RS05110		-1.0	-2.9	YebC/PmpR family DNA-binding transcriptional regulator
LRK53_RS05840		-1.0	-4.5	HAMP domain-containing histidine kinase
LRK53_RS11330		-1.0	-1.2	(d)CMP kinase
LRK53_RS07420		-0.9	-1.8	DNA repair protein RadA
LRK53_RS13095		-0.9	-2.4	AzlD domain-containing protein
LRK53_RS03630		-0.9	-6.0	fatty acid desaturase
LRK53_RS18155		-0.9	-1.4	hypothetical protein
LRK53_RS11285		-0.9	-1.4	tRNA-binding protein
LRK53_RS04890		-0.9	-1.8	2-dehydro-3-deoxy-6-phosphogalactonate aldolase
LRK53_RS15180		-0.9	-1.6	chemotaxis protein
LRK53_RS01745		-0.9	-4.4	TetR/AcrR family transcriptional regulator
LRK53_RS08350		-0.9	-1.5	tryptophan synthase subunit beta
LRK53_RS12890		-0.9	-2.8	hypothetical protein
LRK53_RS08230		-0.9	-2.7	DUF2147 domain-containing protein
LRK53_RS08310		-0.9	-7.3	chorismate synthase
LRK53_RS15875		-0.9	-1.5	hypothetical protein
LRK53_RS11005		-0.9	-1.6	Tn3 family resolvase
LRK53_RS11425		-0.9	-1.7	RnfH family protein
LRK53_RS08480		-0.9	-2.7	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase
LRK53_RS05220		-0.9	-2.3	nucleoside deaminase
LRK53_RS09100		-0.9	-1.3	class III poly(R)-hydroxyalkanoic acid synthase subunit PhaC
LRK53_RS09660		-0.9	-0.7	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
LRK53_RS09655		-0.8	-4.6	ribonuclease R
LRK53_RS00345		-0.8	-2.2	sorbitol dehydrogenase family protein
LRK53_RS14110		-0.8	-1.1	GNAT family N-acetyltransferase
LRK53_RS01570		-0.8	-1.3	DNA polymerase I
LRK53_RS14735		-0.8	-1.4	copper-containing nitrite reductase
LRK53_RS00125		-0.8	-1.9	GntR family transcriptional regulator
LRK53_RS16200		-0.8	-1.8	symmetrical bis(5'-nucleosyl)-tetraphosphatase
LRK53_RS14450		-0.8	-1.3	cytochrome c
LRK53_RS01585		-0.8	-1.4	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
LRK53_RS19005		-0.8	-2.6	phosphoadenosine phosphosulfate reductase family protein
LRK53_RS15715		-0.8	-7.1	HPr(Ser) kinase/phosphatase
LRK53_RS02815		-0.8	-2.0	DmsE family decaheme c-type cytochrome
LRK53_RS13510		-0.8	-4.5	polynucleotide adenylyltransferase PcnB
LRK53_RS18460		-0.8	-1.6	hypothetical protein
LRK53_RS06925		-0.8	-1.0	MtnX-like HAD-IB family phosphatase
LRK53_RS04370		-0.8	-4.1	cystathionine gamma-synthase
LRK53_RS02335		-0.8	-1.0	hypothetical protein
LRK53_RS02950		-0.8	-7.5	YbaY family lipoprotein
LRK53_RS09905		-0.8	-1.1	translesion DNA synthesis-associated protein ImuA
LRK53_RS09170		-0.8	-1.1	cupin domain-containing protein
LRK53_RS05930		-0.8	-1.8	endonuclease domain-containing protein
LRK53_RS05190		-0.8	-0.9	pilus assembly PilX N-terminal domain-containing protein
LRK53_RS06945		-0.8	-2.4	beta-ketoacyl-[acyl-carrier-protein] synthase family protein
LRK53_RS12875		-0.7	-2.6	HDOD domain-containing protein
LRK53_RS01845		-0.7	-4.2	rubredoxin
LRK53_RS05265		-0.7	-1.2	hypothetical protein
LRK53_RS04505		-0.7	-1.4	met regulon transcriptional regulator MetJ
LRK53_RS01235		-0.7	-1.1	monovalent cation:proton antiporter-2 (CPA2) family protein
LRK53_RS04755		-0.7	-3.5	glutaredoxin family protein
LRK53_RS03095		-0.7	-1.5	dihydroxy-acid dehydratase
LRK53_RS10955		-0.7	-2.9	phosphopyruvate hydratase
LRK53_RS08825		-0.7	-1.4	recombination mediator RecR
LRK53_RS09085		-0.7	-0.8	30S ribosomal protein S15
LRK53_RS00215		-0.7	-2.2	TetR/AcrR family transcriptional regulator
LRK53_RS14035		-0.7	-1.9	formate-dependent phosphoribosylglycinamide formyltransferase
LRK53_RS09590		-0.7	-0.9	hypothetical protein
LRK53_RS13205		-0.7	-2.5	hypothetical protein
LRK53_RS15705		-0.7	-3.9	RNA polymerase factor sigma-54
LRK53_RS01110		-0.7	-4.9	TonB-dependent receptor
LRK53_RS06820		-0.7	-1.7	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
LRK53_RS17860		-0.7	-1.2	peptidoglycan DD-metalloendopeptidase family protein
LRK53_RS08820		-0.7	-1.0	YbaB/EbfC family nucleoid-associated protein
LRK53_RS12280		-0.6	-1.6	tRNA pseudouridine(13) synthase TruD
LRK53_RS13085		-0.6	-2.1	SCO family protein
LRK53_RS18830		-0.6	-1.3	TraV family lipoprotein
LRK53_RS13780		-0.6	-1.3	acetoacetyl-CoA reductase
LRK53_RS10470		-0.6	-1.1	MarR family winged helix-turn-helix transcriptional regulator
LRK53_RS09125		-0.6	-2.0	Hsp20/alpha crystallin family protein
LRK53_RS07020		-0.6	-0.8	HlyD family efflux transporter periplasmic adaptor subunit
LRK53_RS16720		-0.6	-5.5	citrate synthase
LRK53_RS14895		-0.6	-0.8	STAS domain-containing protein
LRK53_RS11470		-0.6	-2.0	Rne/Rng family ribonuclease
LRK53_RS17865		-0.6	-0.8	anhydro-N-acetylmuramic acid kinase
LRK53_RS15675		-0.6	-1.1	BolA/IbaG family iron-sulfur metabolism protein
LRK53_RS00405		-0.6	-0.8	trimeric intracellular cation channel family protein
LRK53_RS11400		-0.6	-1.8	DNA repair protein RecN
LRK53_RS18960		-0.6	-1.4	hypothetical protein
LRK53_RS06155		-0.6	-2.0	DUF2069 domain-containing protein
LRK53_RS14795		-0.6	-2.5	hypothetical protein
LRK53_RS01215		-0.6	-3.0	hypothetical protein
LRK53_RS04155		-0.6	-1.0	DUF2383 domain-containing protein
LRK53_RS07625		-0.6	-2.1	hypothetical protein
LRK53_RS00690		-0.6	-1.0	N-acetylglucosamine-6-phosphate deacetylase
LRK53_RS13760		-0.6	-2.4	hypothetical protein
LRK53_RS02925		-0.6	-1.7	DNA-processing protein DprA
LRK53_RS11995		-0.6	-3.4	Do family serine endopeptidase
LRK53_RS13055		-0.6	-2.0	hypothetical protein
LRK53_RS14715		-0.6	-1.7	zinc-binding protein
LRK53_RS17105		-0.6	-3.2	ribulose-phosphate 3-epimerase
LRK53_RS16035		-0.5	-1.0	hypothetical protein
LRK53_RS01505		-0.5	-1.2	hotdog fold thioesterase
LRK53_RS13190		-0.5	-2.8	SAM-dependent methyltransferase
LRK53_RS16630		-0.5	-1.3	hypothetical protein
LRK53_RS03160		-0.5	-1.2	homoserine kinase
LRK53_RS00760		-0.5	-0.6	DUF302 domain-containing protein
LRK53_RS16495		-0.5	-1.0	adenosylhomocysteinase
LRK53_RS00985		-0.5	-2.1	hypothetical protein
LRK53_RS03200		-0.5	-2.7	UbiA family prenyltransferase
LRK53_RS14950		-0.5	-0.6	flagellar hook-length control protein FliK
LRK53_RS16195		-0.5	-2.0	Co2+/Mg2+ efflux protein ApaG
LRK53_RS00945		-0.5	-1.0	helix-turn-helix domain-containing protein
LRK53_RS08515		-0.5	-2.5	high-potential iron-sulfur protein
LRK53_RS11780		-0.5	-0.7	cytochrome-c oxidase, cbb3-type subunit I
LRK53_RS07890		-0.5	-2.6	hypothetical protein
LRK53_RS02845		-0.5	-1.7	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
LRK53_RS02535		-0.5	-2.8	DUF481 domain-containing protein
LRK53_RS01095		-0.5	-2.2	lipid A biosynthesis acyltransferase
LRK53_RS09925		-0.5	-2.5	Hg(II)-responsive transcriptional regulator
LRK53_RS15725		-0.5	-4.5	PTS fructose transporter subunit IIA
LRK53_RS14020		-0.5	-4.1	DUF2007 domain-containing protein
LRK53_RS13775		-0.5	-1.3	tRNA glutamyl-Q(34) synthetase GluQRS
LRK53_RS09875		-0.5	-1.8	BolA family transcriptional regulator
LRK53_RS08530		-0.5	-1.4	NUDIX hydrolase
LRK53_RS15655		-0.5	-1.9	phosphoribosylformylglycinamidine cyclo-ligase
LRK53_RS04655		-0.5	-2.3	manganese efflux pump MntP family protein
LRK53_RS16590		-0.5	-1.4	ABC transporter permease
LRK53_RS18095		-0.5	-2.8	Bax inhibitor-1/YccA family protein
LRK53_RS02965		-0.5	-3.0	RDD family protein
LRK53_RS00395		-0.5	-1.1	SDR family oxidoreductase
LRK53_RS09235		-0.5	-2.3	DUF6326 family protein
LRK53_RS11230		-0.5	-2.1	hypothetical protein
LRK53_RS00015		-0.5	-2.6	DNA replication/repair protein RecF
LRK53_RS07030		-0.5	-2.1	ABC transporter permease
LRK53_RS18700		-0.5	-1.7	H-NS histone family protein
LRK53_RS10035		-0.5	-0.6	hypothetical protein
LRK53_RS01790		-0.5	-2.8	6-phosphofructokinase
LRK53_RS00410		-0.4	-2.3	M20 family metallopeptidase
LRK53_RS12870		-0.4	-1.6	LLM class flavin-dependent oxidoreductase
LRK53_RS17205		-0.4	-1.9	fumarylacetoacetate hydrolase family protein
LRK53_RS00475		-0.4	-2.1	DegT/DnrJ/EryC1/StrS family aminotransferase
LRK53_RS02265		-0.4	-1.8	beta-ketoacyl synthase chain length factor

Specific Phenotypes

None in this experiment

For Rhodanobacter sp000427505 FW510-R12 in pH experiments