Experiment set3S198 for Rhodanobacter sp000427505 FW510-R12

Compare to:

R2A_PIPES with Cadmium chloride hemipentahydrate 64 uM

200 most detrimental genes:

  gene name fitness t score description  
LRK53_RS06110 +1.4 3.7 NAD(P) transhydrogenase subunit alpha compare
LRK53_RS01340 +1.2 10.7 DedA family protein compare
LRK53_RS16860 +1.2 1.6 cytochrome bd-I oxidase subunit CydX compare
LRK53_RS19175 +1.1 2.6 hypothetical protein compare
LRK53_RS06870 +0.9 1.5 SUF system Fe-S cluster assembly regulator compare
LRK53_RS12830 +0.9 1.8 YkgJ family cysteine cluster protein compare
LRK53_RS01830 +0.9 1.6 hypothetical protein compare
LRK53_RS16325 +0.8 8.0 nucleoside permease compare
LRK53_RS14700 +0.8 7.3 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA compare
LRK53_RS16345 +0.8 1.1 hypothetical protein compare
LRK53_RS16975 +0.8 6.1 sulfite exporter TauE/SafE family protein compare
LRK53_RS00380 +0.8 1.0 DUF308 domain-containing protein compare
LRK53_RS09955 +0.8 1.2 thioredoxin family protein compare
LRK53_RS14640 +0.8 1.4 MoaD/ThiS family protein compare
LRK53_RS08450 +0.8 2.4 YerC/YecD family TrpR-related protein compare
LRK53_RS05000 +0.8 6.9 MFS transporter compare
LRK53_RS05010 +0.8 6.7 beta-phosphoglucomutase compare
LRK53_RS03675 +0.8 6.8 glucokinase compare
LRK53_RS14695 +0.7 6.4 beta-ketoacyl-ACP synthase I compare
LRK53_RS14990 +0.7 2.0 chemotaxis response regulator CheY compare
LRK53_RS18650 +0.7 2.3 transposase compare
LRK53_RS17820 +0.7 6.8 carbohydrate kinase family protein compare
LRK53_RS05005 +0.7 6.6 TonB-dependent receptor compare
LRK53_RS10280 +0.7 0.9 2-oxo-3-hexenedioate decarboxylase compare
LRK53_RS07600 +0.7 1.2 ABC transporter ATP-binding protein compare
LRK53_RS05740 +0.7 1.1 chemotaxis protein CheW compare
LRK53_RS15605 +0.7 2.1 MGMT family protein compare
LRK53_RS04590 +0.7 4.8 TetR/AcrR family transcriptional regulator compare
LRK53_RS03875 +0.6 2.2 DUF4194 domain-containing protein compare
LRK53_RS13765 +0.6 5.6 molecular chaperone HtpG compare
LRK53_RS11380 +0.6 4.3 molecular chaperone DnaJ compare
LRK53_RS10775 +0.6 1.6 hypothetical protein compare
LRK53_RS08415 +0.6 2.7 transcriptional repressor compare
LRK53_RS16940 +0.6 1.6 FHA domain-containing protein compare
LRK53_RS09935 +0.6 1.9 mercury resistance system periplasmic binding protein MerP compare
LRK53_RS11255 +0.6 1.7 DNA oxidative demethylase AlkB compare
LRK53_RS15140 +0.6 2.4 flagellar basal body P-ring protein FlgI compare
LRK53_RS00940 +0.6 1.0 hypothetical protein compare
LRK53_RS04430 +0.6 4.6 glycosyltransferase family 2 protein compare
LRK53_RS07500 +0.6 1.3 membrane protein insertion efficiency factor YidD compare
LRK53_RS10275 +0.6 1.9 2-oxopent-4-enoate hydratase compare
LRK53_RS08635 +0.6 1.7 M48 family metallopeptidase compare
LRK53_RS13805 +0.6 1.7 pirin family protein compare
LRK53_RS09420 +0.6 1.1 YidB family protein compare
LRK53_RS02255 +0.6 1.7 3-oxoacyl-ACP reductase FabG compare
LRK53_RS02625 +0.6 1.6 plasmid stabilization protein compare
LRK53_RS11635 +0.6 1.8 M48 family metallopeptidase compare
LRK53_RS01120 +0.5 1.4 VanZ family protein compare
LRK53_RS13060 +0.5 1.0 DksA/TraR family C4-type zinc finger protein compare
LRK53_RS01945 +0.5 1.6 hypothetical protein compare
LRK53_RS07955 +0.5 1.8 5'-nucleotidase compare
LRK53_RS11925 +0.5 1.8 hypoxanthine-guanine phosphoribosyltransferase compare
LRK53_RS09900 +0.5 2.1 transcriptional repressor LexA compare
LRK53_RS14355 +0.5 2.6 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase compare
LRK53_RS10625 +0.5 2.4 alpha/beta hydrolase compare
LRK53_RS08855 +0.5 1.5 Maf family nucleotide pyrophosphatase compare
LRK53_RS12545 +0.5 1.7 hypothetical protein compare
LRK53_RS01845 +0.5 3.3 rubredoxin compare
LRK53_RS18070 +0.5 1.8 HAD family hydrolase compare
LRK53_RS03625 +0.5 1.1 ABC transporter ATP-binding protein compare
LRK53_RS18420 +0.5 2.2 hypothetical protein compare
LRK53_RS07665 +0.5 1.5 glutathione S-transferase family protein compare
LRK53_RS11620 +0.5 1.2 hypothetical protein compare
LRK53_RS02405 +0.5 1.3 YecA family protein compare
LRK53_RS13600 +0.5 3.9 Ppx/GppA family phosphatase compare
LRK53_RS02845 +0.5 2.0 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase compare
LRK53_RS12110 +0.5 4.3 transglycosylase SLT domain-containing protein compare
LRK53_RS12025 +0.5 0.9 DUF2058 family protein compare
LRK53_RS08070 +0.5 1.9 DUF411 domain-containing protein compare
LRK53_RS03575 +0.5 2.7 AI-2E family transporter compare
LRK53_RS09330 +0.5 1.9 PilZ domain-containing protein compare
LRK53_RS15955 +0.5 1.5 PhzF family phenazine biosynthesis protein compare
LRK53_RS02850 +0.4 0.7 response regulator compare
LRK53_RS15200 +0.4 0.6 flagellar protein FlgN compare
LRK53_RS10425 +0.4 0.9 DNA-binding protein compare
LRK53_RS15615 +0.4 3.5 inorganic phosphate transporter compare
LRK53_RS16730 +0.4 1.0 nucleoside hydrolase compare
LRK53_RS11395 +0.4 2.6 heat-inducible transcriptional repressor HrcA compare
LRK53_RS00135 +0.4 2.7 patatin-like phospholipase family protein compare
LRK53_RS06045 +0.4 1.6 type II toxin-antitoxin system RelE/ParE family toxin compare
LRK53_RS05170 +0.4 0.8 7-carboxy-7-deazaguanine synthase QueE compare
LRK53_RS13635 +0.4 1.2 recombination regulator RecX compare
LRK53_RS13450 +0.4 2.6 FKBP-type peptidyl-prolyl cis-trans isomerase compare
LRK53_RS05255 +0.4 1.9 LysR substrate-binding domain-containing protein compare
LRK53_RS11070 +0.4 2.7 MBL fold metallo-hydrolase compare
LRK53_RS12245 +0.4 1.0 ribosome assembly RNA-binding protein YhbY compare
LRK53_RS11050 +0.4 1.2 hypothetical protein compare
LRK53_RS04815 +0.4 1.1 IS5 family transposase compare
LRK53_RS17005 +0.4 1.0 hypothetical protein compare
LRK53_RS10175 +0.4 2.1 DUF3606 domain-containing protein compare
LRK53_RS07570 +0.4 2.0 glutamate 5-kinase compare
LRK53_RS05625 +0.4 0.9 shikimate kinase compare
LRK53_RS08670 +0.4 1.2 heavy metal-responsive transcriptional regulator compare
LRK53_RS16830 +0.4 1.8 PilZ domain-containing protein compare
LRK53_RS13025 +0.4 1.3 DMT family transporter compare
LRK53_RS15625 +0.4 2.9 hemolysin family protein compare
LRK53_RS18980 +0.4 1.0 hypothetical protein compare
LRK53_RS08060 +0.4 1.9 copper resistance protein B compare
LRK53_RS16935 +0.4 1.6 hypothetical protein compare
LRK53_RS02530 +0.4 1.4 hypothetical protein compare
LRK53_RS09540 +0.4 2.7 protease modulator HflC compare
LRK53_RS10060 +0.4 1.6 sigma-70 family RNA polymerase sigma factor compare
LRK53_RS14085 +0.4 1.8 ABC transporter permease subunit compare
LRK53_RS13005 +0.4 0.6 ATP-binding cassette domain-containing protein compare
LRK53_RS17500 +0.4 1.2 YciI family protein compare
LRK53_RS04400 +0.4 3.4 hypothetical protein compare
LRK53_RS03970 +0.4 1.2 hypothetical protein compare
LRK53_RS14670 +0.4 0.9 purine-nucleoside phosphorylase compare
LRK53_RS05840 +0.4 2.3 HAMP domain-containing histidine kinase compare
LRK53_RS08420 +0.4 1.6 MerC domain-containing protein compare
LRK53_RS07325 +0.4 2.8 peptidylprolyl isomerase compare
LRK53_RS15645 +0.4 1.3 AI-2E family transporter compare
LRK53_RS03360 +0.4 1.0 P-II family nitrogen regulator compare
LRK53_RS10530 +0.4 1.3 acyl-CoA dehydrogenase family protein compare
LRK53_RS08290 +0.4 2.3 hypothetical protein compare
LRK53_RS10430 +0.4 1.8 tetratricopeptide repeat protein compare
LRK53_RS07200 +0.4 1.0 hypothetical protein compare
LRK53_RS03450 +0.4 2.6 HlyD family secretion protein compare
LRK53_RS10265 +0.4 1.8 2-hydroxymuconic semialdehyde dehydrogenase compare
LRK53_RS11370 +0.4 1.6 2OG-Fe(II) oxygenase compare
LRK53_RS02890 +0.4 2.1 glycosyltransferase compare
LRK53_RS11815 +0.4 1.7 hypothetical protein compare
LRK53_RS13710 +0.4 1.7 AEC family transporter compare
LRK53_RS19165 +0.4 1.0 hypothetical protein compare
LRK53_RS14090 +0.4 0.8 ABC transporter ATP-binding protein compare
LRK53_RS04880 +0.4 2.1 SDR family oxidoreductase compare
LRK53_RS15590 +0.4 2.5 LacI family DNA-binding transcriptional regulator compare
LRK53_RS15950 +0.3 3.1 fumarate hydratase compare
LRK53_RS04860 +0.3 0.9 transposase compare
LRK53_RS13850 +0.3 1.8 peptidylprolyl isomerase compare
LRK53_RS19140 +0.3 0.7 hypothetical protein compare
LRK53_RS03370 +0.3 0.4 YifB family Mg chelatase-like AAA ATPase compare
LRK53_RS02575 +0.3 2.4 ACP phosphodiesterase compare
LRK53_RS12980 +0.3 0.6 hypothetical protein compare
LRK53_RS10565 +0.3 2.5 acyl-CoA thioesterase compare
LRK53_RS13770 +0.3 1.3 protease HtpX compare
LRK53_RS18155 +0.3 0.7 hypothetical protein compare
LRK53_RS06585 +0.3 1.6 transposase compare
LRK53_RS10600 +0.3 3.0 DUF1302 domain-containing protein compare
LRK53_RS16665 +0.3 1.8 VWA domain-containing protein compare
LRK53_RS17100 +0.3 1.1 proteobacterial dedicated sortase system response regulator compare
LRK53_RS16310 +0.3 1.2 YraN family protein compare
LRK53_RS09260 +0.3 1.4 ABC transporter ATP-binding protein compare
LRK53_RS04485 +0.3 2.9 sulfate adenylyltransferase subunit CysD compare
LRK53_RS16200 +0.3 1.1 symmetrical bis(5'-nucleosyl)-tetraphosphatase compare
LRK53_RS10500 +0.3 1.4 transposase compare
LRK53_RS02245 +0.3 2.7 MMPL family transporter compare
LRK53_RS08080 +0.3 2.0 TolC family protein compare
LRK53_RS06145 +0.3 2.1 thioesterase family protein compare
LRK53_RS14300 +0.3 1.2 FAD:protein FMN transferase compare
LRK53_RS12075 +0.3 2.8 phosphoenolpyruvate synthase compare
LRK53_RS10160 +0.3 0.9 2Fe-2S iron-sulfur cluster-binding protein compare
LRK53_RS17865 +0.3 0.5 anhydro-N-acetylmuramic acid kinase compare
LRK53_RS18050 +0.3 1.6 glucose 1-dehydrogenase compare
LRK53_RS00565 +0.3 0.7 ATP-binding protein compare
LRK53_RS12105 +0.3 2.5 hydroxyacylglutathione hydrolase compare
LRK53_RS05360 +0.3 1.1 peptide deformylase compare
LRK53_RS12660 +0.3 1.9 MarR family transcriptional regulator compare
LRK53_RS00825 +0.3 2.0 family 20 glycosylhydrolase compare
LRK53_RS17210 +0.3 2.2 homogentisate 1,2-dioxygenase compare
LRK53_RS18445 +0.3 0.7 hypothetical protein compare
LRK53_RS10595 +0.3 2.5 2-phosphosulfolactate phosphatase compare
LRK53_RS04610 +0.3 1.6 diguanylate cyclase compare
LRK53_RS09455 +0.3 1.6 dicarboxylate/amino acid:cation symporter compare
LRK53_RS17160 +0.3 1.7 group III truncated hemoglobin compare
LRK53_RS06155 +0.3 1.3 DUF2069 domain-containing protein compare
LRK53_RS13415 +0.3 0.6 DUF2059 domain-containing protein compare
LRK53_RS14445 +0.3 1.3 TIGR00730 family Rossman fold protein compare
LRK53_RS02895 +0.3 2.5 O-antigen ligase family protein compare
LRK53_RS15445 +0.3 1.5 hypothetical protein compare
LRK53_RS16960 +0.3 1.4 2OG-Fe(II) oxygenase compare
LRK53_RS01100 +0.3 1.9 pteridine reductase compare
LRK53_RS13035 +0.3 1.0 hypothetical protein compare
LRK53_RS11540 +0.3 1.8 MFS transporter compare
LRK53_RS16195 +0.3 1.4 Co2+/Mg2+ efflux protein ApaG compare
LRK53_RS02670 +0.3 2.5 DEAD/DEAH box helicase compare
LRK53_RS15350 +0.3 1.5 class I SAM-dependent methyltransferase compare
LRK53_RS12015 +0.3 1.9 hypothetical protein compare
LRK53_RS14140 +0.3 1.7 DNA-3-methyladenine glycosylase compare
LRK53_RS04130 +0.3 1.1 universal stress protein compare
LRK53_RS07980 +0.3 0.5 GNAT family N-acetyltransferase compare
LRK53_RS03590 +0.3 1.3 thymidine kinase compare
LRK53_RS03660 +0.3 1.1 hypothetical protein compare
LRK53_RS13820 +0.3 1.5 cold-shock protein compare
LRK53_RS07380 +0.3 1.6 hypothetical protein compare
LRK53_RS04680 +0.3 0.8 DUF1304 domain-containing protein compare
LRK53_RS15675 +0.3 0.7 BolA/IbaG family iron-sulfur metabolism protein compare
LRK53_RS10975 +0.3 1.2 hypothetical protein compare
LRK53_RS09430 +0.3 2.7 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
LRK53_RS18215 +0.3 1.6 single-stranded DNA-binding protein compare
LRK53_RS03285 +0.3 2.6 M61 family metallopeptidase compare
LRK53_RS03855 +0.3 1.6 ATP-dependent DNA helicase DinG compare
LRK53_RS08555 +0.3 2.1 peptide-methionine (S)-S-oxide reductase MsrA compare
LRK53_RS06990 +0.3 1.1 hypothetical protein compare
LRK53_RS01520 +0.3 1.1 rhodanese-like domain-containing protein compare
LRK53_RS17970 +0.3 1.7 ParA family protein compare
LRK53_RS13050 +0.3 1.1 hypothetical protein compare
LRK53_RS02350 +0.3 0.9 hypothetical protein compare
LRK53_RS03225 +0.3 1.0 hypothetical protein compare
LRK53_RS18255 +0.3 0.9 hypothetical protein compare


Specific Phenotypes

For 7 genes in this experiment

For stress Cadmium chloride hemipentahydrate in Rhodanobacter sp000427505 FW510-R12

For stress Cadmium chloride hemipentahydrate across organisms