Experiment set3IT059 for Methanococcus maripaludis S2

Compare to:

H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS09055 +1.5 3.0 CAP domain-containing protein compare
MMP_RS01650 +1.3 1.7 sulfurtransferase TusA family protein compare
MMP_RS08860 +1.3 7.6 MinD/ParA family protein compare
MMP_RS08855 +1.2 9.1 hypothetical protein compare
MMP_RS01290 +1.2 11.0 class III signal peptide-containing protein compare
MMP_RS08615 +1.2 2.8 flagellar protein G compare
MMP_RS01285 +1.2 10.6 hypothetical protein compare
MMP_RS08940 +1.2 2.8 MetS family NSS transporter small subunit compare
MMP_RS08675 +1.2 4.8 class III signal peptide-containing protein compare
MMP_RS00240 +1.2 10.0 type II secretion system F family protein compare
MMP_RS01305 +1.1 10.6 hypothetical protein compare
MMP_RS01280 +1.1 10.2 DUF515 domain-containing protein compare
MMP_RS01295 +1.1 8.8 hypothetical protein compare
MMP_RS01310 +1.1 10.3 hypothetical protein compare
MMP_RS01315 +1.1 10.1 DUF2341 domain-containing protein compare
MMP_RS00245 +1.1 9.8 type II secretion system F family protein compare
MMP_RS05985 +1.1 4.1 hypothetical protein compare
MMP_RS00250 +1.0 8.8 Flp pilus assembly complex ATPase component TadA compare
MMP_RS06720 +1.0 5.5 response regulator transcription factor compare
MMP_RS01085 +1.0 2.9 hypothetical protein compare
MMP_RS08075 +0.9 4.2 DUF749 domain-containing protein compare
MMP_RS01195 +0.9 1.9 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS01270 +0.9 7.9 prepilin peptidase compare
MMP_RS06715 +0.9 7.3 cache domain-containing protein compare
MMP_RS05865 +0.9 1.7 hypothetical protein compare
MMP_RS01275 +0.8 5.2 class III signal peptide-containing protein compare
MMP_RS04410 +0.7 2.8 hypothetical protein compare
MMP_RS01790 +0.7 3.3 restriction endonuclease compare
MMP_RS06840 +0.7 0.9 DNA-directed RNA polymerase subunit N compare
MMP_RS01570 +0.7 1.6 hypothetical protein compare
MMP_RS02605 +0.7 0.8 MotA/TolQ/ExbB proton channel family protein compare
MMP_RS03550 +0.7 1.7 DUF2124 domain-containing protein compare
MMP_RS00570 +0.6 1.2 protein-L-isoaspartate O-methyltransferase compare
MMP_RS01075 +0.6 1.7 hypothetical protein compare
MMP_RS08845 +0.6 4.1 archaellum operon transcriptional activator EarA family protein compare
MMP_RS05965 +0.6 1.8 carboxymuconolactone decarboxylase family protein compare
MMP_RS06525 +0.6 1.1 YciI family protein compare
MMP_RS07530 +0.6 4.4 4Fe-4S binding protein compare
MMP_RS06140 +0.6 2.7 radical SAM protein compare
MMP_RS04125 +0.6 2.3 TetR/AcrR family transcriptional regulator compare
MMP_RS07415 +0.6 3.3 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
MMP_RS08750 +0.6 1.1 hypothetical protein compare
MMP_RS07880 +0.6 3.4 AAA family ATPase compare
MMP_RS07535 +0.6 4.3 4Fe-4S binding protein compare
MMP_RS05635 +0.6 4.3 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS06860 +0.6 1.5 4Fe-4S binding protein compare
MMP_RS07775 +0.6 1.9 alanine dehydrogenase compare
MMP_RS05975 +0.5 1.3 hypothetical protein compare
MMP_RS07615 +0.5 2.7 energy-coupling factor ABC transporter permease compare
MMP_RS07765 +0.5 2.8 sodium:alanine symporter family protein compare
MMP_RS03625 +0.5 2.8 cell wall-binding protein compare
MMP_RS06760 +0.5 1.1 hypothetical protein compare
MMP_RS00655 +0.5 2.3 hypothetical protein compare
MMP_RS07900 +0.5 1.0 YeeE/YedE family protein compare
MMP_RS00140 +0.5 3.1 DUF192 domain-containing protein compare
MMP_RS08580 +0.5 1.9 flagellin compare
MMP_RS09045 +0.5 3.8 class III signal peptide-containing protein compare
MMP_RS06015 +0.5 2.0 flavodoxin family protein compare
MMP_RS04695 +0.5 3.1 selenide water dikinase SelD compare
MMP_RS08850 +0.5 4.1 hypothetical protein compare
MMP_RS02805 +0.5 0.9 HEPN domain-containing protein compare
MMP_RS01635 +0.5 2.4 thiamine pyrophosphate-dependent enzyme compare
MMP_RS07330 +0.5 4.1 membrane protein compare
MMP_RS05315 +0.4 1.1 hypothetical protein compare
MMP_RS08410 +0.4 1.8 DUF169 domain-containing protein compare
MMP_RS08070 +0.4 2.4 DUF2096 domain-containing protein compare
MMP_RS06035 +0.4 3.0 glycosyltransferase family 2 protein compare
MMP_RS08380 +0.4 2.5 phosphatase PAP2 family protein compare
MMP_RS02545 +0.4 1.2 hypothetical protein compare
MMP_RS00120 +0.4 2.0 LysR family transcriptional regulator compare
MMP_RS07960 +0.4 2.9 sugar phosphate isomerase/epimerase compare
MMP_RS00535 +0.4 1.1 TIGR00375 family protein compare
MMP_RS03535 +0.4 1.2 helix-turn-helix transcriptional regulator compare
MMP_RS00130 +0.4 0.7 nickel-responsive transcriptional regulator NikR compare
MMP_RS02530 +0.4 1.7 type II toxin-antitoxin system mRNA interferase toxin RelE/StbE family compare
MMP_RS00710 +0.4 1.8 hypothetical protein compare
MMP_RS01320 +0.4 1.8 hypothetical protein compare
MMP_RS01630 +0.4 2.6 N-glycosylase/DNA lyase compare
MMP_RS02020 +0.4 1.5 gamma-glutamylcyclotransferase compare
MMP_RS06050 +0.4 2.2 ZIP family metal transporter compare
MMP_RS01255 +0.4 1.2 amino acid ABC transporter ATP-binding protein compare
MMP_RS08665 +0.4 3.2 hypothetical protein compare
MMP_RS00690 +0.4 1.8 MBL fold metallo-hydrolase compare
MMP_RS01870 +0.4 1.7 acyl-CoA dehydratase activase compare
MMP_RS03125 +0.4 2.6 cell division ATPase MinD compare
MMP_RS07805 +0.4 2.1 ABC transporter permease compare
MMP_RS08320 +0.4 2.6 molybdopterin molybdotransferase MoeA compare
MMP_RS02870 +0.4 2.4 hypothetical protein compare
MMP_RS06115 +0.4 2.4 class II aldolase/adducin family protein compare
MMP_RS07905 +0.4 1.8 DUF3343 domain-containing protein compare
MMP_RS08395 +0.4 1.2 DsrE family protein compare
MMP_RS07840 +0.4 1.4 ribonuclease III compare
MMP_RS03120 +0.4 1.3 hypothetical protein compare
MMP_RS08275 +0.4 2.2 hypothetical protein compare
MMP_RS08830 +0.4 1.7 GTP-binding protein compare
MMP_RS08485 +0.4 2.6 tungstate ABC transporter substrate-binding protein WtpA compare
MMP_RS01125 +0.4 1.6 thioredoxin family protein compare
MMP_RS06385 +0.4 1.3 hypothetical protein compare
MMP_RS08390 +0.3 1.6 DUF5400 domain-containing protein compare
MMP_RS00090 +0.3 1.3 CoA-binding protein compare
MMP_RS08285 +0.3 2.0 serine/threonine protein kinase compare
MMP_RS06225 +0.3 1.7 DNA double-strand break repair nuclease NurA compare
MMP_RS05990 +0.3 1.8 DsrE family protein compare
MMP_RS04145 +0.3 0.8 hypothetical protein compare
MMP_RS06990 +0.3 1.6 CatB-related O-acetyltransferase compare
MMP_RS04060 +0.3 1.5 hypothetical protein compare
MMP_RS04255 +0.3 1.4 coenzyme F420 hydrogenase subunit beta compare
MMP_RS01100 +0.3 0.8 ABC transporter ATP-binding protein compare
MMP_RS00395 +0.3 0.8 MGMT family protein compare
MMP_RS03845 +0.3 1.8 DNA adenine methylase compare
MMP_RS03965 +0.3 1.0 hypothetical protein compare
MMP_RS01675 +0.3 0.8 hypothetical protein compare
MMP_RS00345 +0.3 1.4 DUF2666 domain-containing protein compare
MMP_RS01440 +0.3 1.2 NAAT family transporter compare
MMP_RS08265 +0.3 1.8 rubrerythrin compare
MMP_RS05960 +0.3 2.3 CoB--CoM heterodisulfide reductase subunit B compare
MMP_RS08080 +0.3 1.7 YchF/TatD family DNA exonuclease compare
MMP_RS05780 +0.3 2.0 multidrug resistance efflux transporter family protein compare
MMP_RS06335 +0.3 1.8 HAD family hydrolase compare
MMP_RS08400 +0.3 0.6 MJ0307 family thioredoxin compare
MMP_RS01490 +0.3 1.4 tetratricopeptide repeat protein compare
MMP_RS02625 +0.3 1.7 ribonuclease H-like domain-containing protein compare
MMP_RS07800 +0.3 1.3 ATP-binding cassette domain-containing protein compare
MMP_RS06540 +0.3 1.2 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMP_RS01765 +0.3 1.2 HIT family protein compare
MMP_RS02255 +0.3 1.3 hypothetical protein compare
MMP_RS06710 +0.3 1.6 selenium-binding protein compare
MMP_RS01260 +0.3 1.6 HDIG domain-containing protein compare
MMP_RS06070 +0.3 2.2 iron ABC transporter substrate-binding protein compare
MMP_RS05910 +0.3 0.9 cell division ATPase MinD compare
MMP_RS00540 +0.3 1.6 PLP-dependent aminotransferase family protein compare
MMP_RS07985 +0.3 2.3 nitroreductase family protein compare
MMP_RS07640 +0.3 1.4 mechanosensitive ion channel family protein compare
MMP_RS06915 +0.3 1.1 metallophosphoesterase compare
MMP_RS02045 +0.3 0.6 tRNA-Met compare
MMP_RS01135 +0.3 1.8 molybdate ABC transporter substrate-binding protein compare
MMP_RS07550 +0.3 1.5 L-serine ammonia-lyase iron-sulfur-dependent subunit alpha compare
MMP_RS03060 +0.3 1.3 MBL fold metallo-hydrolase compare
MMP_RS02320 +0.3 1.6 glutamate-cysteine ligase family protein compare
MMP_RS07590 +0.3 2.1 hypothetical protein compare
MMP_RS08385 +0.3 1.0 ABC transporter substrate-binding protein compare
MMP_RS00155 +0.3 1.8 heavy metal-binding domain-containing protein compare
MMP_RS01855 +0.3 1.6 2-hydroxyacyl-CoA dehydratase family protein compare
MMP_RS07620 +0.3 1.1 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS08405 +0.2 1.5 MFS transporter compare
MMP_RS08250 +0.2 1.5 pyruvate kinase compare
MMP_RS04610 +0.2 0.9 Dabb family protein compare
MMP_RS06300 +0.2 1.6 ABC transporter substrate-binding protein compare
MMP_RS06100 +0.2 1.6 GNAT family N-acetyltransferase compare
MMP_RS06430 +0.2 1.0 6-carboxytetrahydropterin synthase QueD compare
MMP_RS08280 +0.2 1.0 proteasome assembly chaperone family protein compare
MMP_RS05095 +0.2 1.2 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMP_RS05365 +0.2 0.6 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMP_RS01185 +0.2 1.3 hypothetical protein compare
MMP_RS05490 +0.2 1.3 IMPACT family protein compare
MMP_RS05785 +0.2 1.8 ATP-binding protein compare
MMP_RS03565 +0.2 1.4 uracil phosphoribosyltransferase compare
MMP_RS01110 +0.2 0.6 FmdE family protein compare
MMP_RS08310 +0.2 0.7 TMEM165/GDT1 family protein compare
MMP_RS08770 +0.2 1.4 hypothetical protein compare
MMP_RS02215 +0.2 1.6 ECF transporter S component compare
MMP_RS05235 +0.2 1.3 exodeoxyribonuclease III compare
MMP_RS02260 +0.2 1.3 lactate utilization protein compare
MMP_RS02540 +0.2 0.9 DUF2283 domain-containing protein compare
MMP_RS04995 +0.2 1.2 hypothetical protein compare
MMP_RS05995 +0.2 1.9 FprA family A-type flavoprotein compare
MMP_RS06500 +0.2 1.5 ATP-binding protein compare
MMP_RS01770 +0.2 1.6 ATP-dependent endonuclease compare
MMP_RS08290 +0.2 1.3 DNA-binding protein Alba compare
MMP_RS08160 +0.2 1.2 EamA family transporter compare
MMP_RS05435 +0.2 1.2 5'/3'-nucleotidase SurE compare
MMP_RS05715 +0.2 1.2 hypothetical protein compare
MMP_RS05090 +0.2 1.2 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMP_RS07925 +0.2 1.2 haloacid dehalogenase compare
MMP_RS08980 +0.2 1.0 hypothetical protein compare
MMP_RS05125 +0.2 1.3 D-aminoacyl-tRNA deacylase compare
MMP_RS02295 +0.2 1.5 TatD family hydrolase compare
MMP_RS02770 +0.2 0.8 hypothetical protein compare
MMP_RS07150 +0.2 1.2 MTH895/ArsE family thioredoxin-like protein compare
MMP_RS03900 +0.2 1.1 minichromosome maintenance protein MCM compare
MMP_RS06445 +0.2 0.8 DUF89 domain-containing protein compare
MMP_RS02735 +0.2 1.1 MBL fold metallo-hydrolase compare
MMP_RS02745 +0.2 0.7 hypothetical protein compare
MMP_RS06305 +0.2 1.2 transporter substrate-binding domain-containing protein compare
MMP_RS01655 +0.2 0.4 DsrE family protein compare
MMP_RS01105 +0.2 1.3 hypothetical protein compare
MMP_RS04190 +0.2 1.2 hypothetical protein compare
MMP_RS04205 +0.2 1.0 carboxymuconolactone decarboxylase family protein compare
MMP_RS06560 +0.2 1.4 hypothetical protein compare
MMP_RS05445 +0.2 1.1 CoB--CoM heterodisulfide reductase subunit B compare
MMP_RS07085 +0.2 0.9 ribonuclease HII compare
MMP_RS06005 +0.2 0.6 heavy-metal-associated domain-containing protein compare
MMP_RS07910 +0.2 0.9 NAD(P)H-hydrate dehydratase compare
MMP_RS07895 +0.2 0.7 cytochrome c compare
MMP_RS08775 +0.2 1.1 methanogenesis marker 9 domain-containing protein compare
MMP_RS08610 +0.2 1.3 flagellar protein F compare
MMP_RS04220 +0.2 1.3 queuosine precursor transporter compare
MMP_RS02170 +0.2 1.0 CBS domain-containing protein compare
MMP_RS02455 +0.2 1.0 hypothetical protein compare
MMP_RS07970 +0.2 0.8 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in nutrient t2 experiments

For nutrient t2 Sodium acetate across organisms