Experiment set3IT048 for Methanococcus maripaludis S2

Compare to:

H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS08940 +3.9 7.5 MetS family NSS transporter small subunit compare
MMP_RS07330 +3.9 34.6 membrane protein compare
MMP_RS08675 +3.7 13.6 class III signal peptide-containing protein compare
MMP_RS08860 +3.7 23.9 MinD/ParA family protein compare
MMP_RS08855 +3.7 26.9 hypothetical protein compare
MMP_RS05635 +3.7 23.1 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS01270 +3.6 31.4 prepilin peptidase compare
MMP_RS01290 +3.5 30.2 class III signal peptide-containing protein compare
MMP_RS00240 +3.5 30.9 type II secretion system F family protein compare
MMP_RS00245 +3.5 31.7 type II secretion system F family protein compare
MMP_RS01285 +3.5 31.0 hypothetical protein compare
MMP_RS01280 +3.5 29.1 DUF515 domain-containing protein compare
MMP_RS09055 +3.5 5.1 CAP domain-containing protein compare
MMP_RS01305 +3.4 30.9 hypothetical protein compare
MMP_RS00250 +3.4 29.9 Flp pilus assembly complex ATPase component TadA compare
MMP_RS01310 +3.4 32.3 hypothetical protein compare
MMP_RS01295 +3.4 26.6 hypothetical protein compare
MMP_RS01315 +3.3 29.4 DUF2341 domain-containing protein compare
MMP_RS06035 +3.3 12.2 glycosyltransferase family 2 protein compare
MMP_RS01275 +3.3 19.9 class III signal peptide-containing protein compare
MMP_RS01085 +3.2 7.8 hypothetical protein compare
MMP_RS01195 +3.0 5.1 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS03125 +2.9 14.1 cell division ATPase MinD compare
MMP_RS09045 +2.5 15.5 class III signal peptide-containing protein compare
MMP_RS08615 +2.4 2.1 flagellar protein G compare
MMP_RS05580 +2.4 19.1 glycosyltransferase compare
MMP_RS06600 +2.1 1.9 class III signal peptide-containing protein compare
MMP_RS00140 +2.1 11.8 DUF192 domain-containing protein compare
MMP_RS05865 +2.0 1.7 hypothetical protein compare
MMP_RS01075 +2.0 1.6 hypothetical protein compare
MMP_RS07115 +1.9 4.0 MBL fold metallo-hydrolase compare
MMP_RS04410 +1.6 2.6 hypothetical protein compare
MMP_RS06175 +1.6 6.0 winged helix-turn-helix transcriptional regulator compare
MMP_RS04125 +1.6 2.3 TetR/AcrR family transcriptional regulator compare
MMP_RS08400 +1.6 1.7 MJ0307 family thioredoxin compare
MMP_RS00535 +1.5 1.6 TIGR00375 family protein compare
MMP_RS00570 +1.5 1.1 protein-L-isoaspartate O-methyltransferase compare
MMP_RS08830 +1.4 3.0 GTP-binding protein compare
MMP_RS01790 +1.4 2.5 restriction endonuclease compare
MMP_RS03550 +1.4 1.0 DUF2124 domain-containing protein compare
MMP_RS05985 +1.4 1.1 hypothetical protein compare
MMP_RS03215 +1.4 8.6 MBL fold metallo-hydrolase compare
MMP_RS08580 +1.4 2.2 flagellin compare
MMP_RS03320 +1.4 1.9 metal-dependent transcriptional regulator compare
MMP_RS07900 +1.3 1.3 YeeE/YedE family protein compare
MMP_RS03080 +1.3 1.7 universal stress protein compare
MMP_RS08750 +1.3 1.1 hypothetical protein compare
MMP_RS03090 +1.3 3.7 cation:proton antiporter compare
MMP_RS00345 +1.3 6.4 DUF2666 domain-containing protein compare
MMP_RS08845 +1.3 3.5 archaellum operon transcriptional activator EarA family protein compare
MMP_RS07345 +1.3 2.4 glycine synthesis protein GlyXL (from data) compare
MMP_RS06015 +1.3 1.7 flavodoxin family protein compare
MMP_RS02545 +1.2 1.8 hypothetical protein compare
MMP_RS01255 +1.2 1.7 amino acid ABC transporter ATP-binding protein compare
MMP_RS05965 +1.2 1.0 carboxymuconolactone decarboxylase family protein compare
MMP_RS03535 +1.2 1.3 helix-turn-helix transcriptional regulator compare
MMP_RS06760 +1.2 1.2 hypothetical protein compare
MMP_RS03305 +1.1 4.7 winged helix-turn-helix domain-containing protein compare
MMP_RS06840 +1.1 0.8 DNA-directed RNA polymerase subunit N compare
MMP_RS03625 +1.1 2.0 cell wall-binding protein compare
MMP_RS01655 +1.1 1.1 DsrE family protein compare
MMP_RS08410 +1.0 1.8 DUF169 domain-containing protein compare
MMP_RS05785 +1.0 5.1 ATP-binding protein compare
MMP_RS01870 +1.0 2.1 acyl-CoA dehydratase activase compare
MMP_RS01300 +1.0 6.7 hypothetical protein compare
MMP_RS02530 +0.9 1.9 type II toxin-antitoxin system mRNA interferase toxin RelE/StbE family compare
MMP_RS08275 +0.9 2.7 hypothetical protein compare
MMP_RS01180 +0.9 1.9 XTP/dITP diphosphatase compare
MMP_RS08280 +0.9 2.1 proteasome assembly chaperone family protein compare
MMP_RS01490 +0.9 1.8 tetratricopeptide repeat protein compare
MMP_RS05365 +0.9 1.4 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMP_RS01125 +0.9 1.8 thioredoxin family protein compare
MMP_RS03120 +0.9 1.4 hypothetical protein compare
MMP_RS00965 +0.9 1.0 hypothetical protein compare
MMP_RS05910 +0.9 1.3 cell division ATPase MinD compare
MMP_RS04255 +0.9 1.7 coenzyme F420 hydrogenase subunit beta compare
MMP_RS07135 +0.9 1.5 coenzyme F420 hydrogenase subunit beta compare
MMP_RS08290 +0.9 2.2 DNA-binding protein Alba compare
MMP_RS00090 +0.9 1.3 CoA-binding protein compare
MMP_RS00690 +0.8 1.9 MBL fold metallo-hydrolase compare
MMP_RS06445 +0.8 1.7 DUF89 domain-containing protein compare
MMP_RS04610 +0.8 1.3 Dabb family protein compare
MMP_RS01110 +0.8 1.0 FmdE family protein compare
MMP_RS06200 +0.8 2.0 M24 family metallopeptidase compare
MMP_RS00655 +0.8 2.2 hypothetical protein compare
MMP_RS08080 +0.8 2.1 YchF/TatD family DNA exonuclease compare
MMP_RS02610 +0.8 1.2 DUF2162 domain-containing protein compare
MMP_RS01320 +0.8 1.6 hypothetical protein compare
MMP_RS06140 +0.8 1.3 radical SAM protein compare
MMP_RS06115 +0.8 2.8 class II aldolase/adducin family protein compare
MMP_RS02540 +0.8 1.5 DUF2283 domain-containing protein compare
MMP_RS06100 +0.8 2.3 GNAT family N-acetyltransferase compare
MMP_RS08850 +0.8 4.4 hypothetical protein compare
MMP_RS06720 +0.7 2.1 response regulator transcription factor compare
MMP_RS02255 +0.7 1.5 hypothetical protein compare
MMP_RS08455 +0.7 2.6 multiprotein bridging factor aMBF1 compare
MMP_RS00530 +0.7 1.6 tRNA pseudouridine(54/55) synthase Pus10 compare
MMP_RS00390 +0.7 2.3 ammonium transporter compare
MMP_RS08385 +0.7 1.4 ABC transporter substrate-binding protein compare
MMP_RS08655 +0.7 3.3 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS04990 +0.7 1.7 aquaporin family protein compare
MMP_RS08610 +0.7 2.7 flagellar protein F compare
MMP_RS06935 +0.7 1.7 protease complex subunit PrcB family protein compare
MMP_RS08770 +0.7 1.9 hypothetical protein compare
MMP_RS08285 +0.7 2.0 serine/threonine protein kinase compare
MMP_RS01185 +0.7 1.4 hypothetical protein compare
MMP_RS05685 +0.7 1.7 winged helix-turn-helix domain-containing protein compare
MMP_RS06050 +0.7 1.7 ZIP family metal transporter compare
MMP_RS07800 +0.7 1.7 ATP-binding cassette domain-containing protein compare
MMP_RS02230 +0.7 4.7 sodium-dependent transporter compare
MMP_RS08395 +0.7 1.1 DsrE family protein compare
MMP_RS02805 +0.7 0.8 HEPN domain-containing protein compare
MMP_RS02625 +0.7 1.4 ribonuclease H-like domain-containing protein compare
MMP_RS06090 +0.7 1.3 iron ABC transporter permease compare
MMP_RS02020 +0.7 0.9 gamma-glutamylcyclotransferase compare
MMP_RS03340 +0.7 0.4 ABC transporter ATP-binding protein compare
MMP_RS01135 +0.6 2.2 molybdate ABC transporter substrate-binding protein compare
MMP_RS02260 +0.6 1.9 lactate utilization protein compare
MMP_RS01570 +0.6 0.8 hypothetical protein compare
MMP_RS00710 +0.6 1.0 hypothetical protein compare
MMP_RS01770 +0.6 2.5 ATP-dependent endonuclease compare
MMP_RS08775 +0.6 2.4 methanogenesis marker 9 domain-containing protein compare
MMP_RS06715 +0.6 3.8 cache domain-containing protein compare
MMP_RS08980 +0.6 1.3 hypothetical protein compare
MMP_RS08665 +0.6 3.7 hypothetical protein compare
MMP_RS04390 +0.6 1.9 hypothetical protein compare
MMP_RS07905 +0.6 1.5 DUF3343 domain-containing protein compare
MMP_RS08405 +0.6 2.7 MFS transporter compare
MMP_RS07365 +0.6 3.5 2-phosphoglycerate kinase compare
MMP_RS06970 +0.6 1.7 ribosomal protein S18-alanine N-acetyltransferase compare
MMP_RS05325 +0.6 1.4 hypothetical protein compare
MMP_RS06665 +0.6 1.9 glycogen/starch synthase compare
MMP_RS01660 +0.6 0.7 hypothetical protein compare
MMP_RS07910 +0.6 1.6 NAD(P)H-hydrate dehydratase compare
MMP_RS00930 +0.6 1.1 ABC transporter permease compare
MMP_RS04995 +0.6 1.7 hypothetical protein compare
MMP_RS00480 +0.6 1.3 hypothetical protein compare
MMP_RS08230 +0.6 1.3 50S ribosomal protein L11 methyltransferase compare
MMP_RS07705 +0.6 1.6 transcriptional regulator compare
MMP_RS02605 +0.6 0.4 MotA/TolQ/ExbB proton channel family protein compare
MMP_RS07570 +0.6 1.9 nucleotidyltransferase family protein compare
MMP_RS04060 +0.6 1.1 hypothetical protein compare
MMP_RS00235 +0.6 1.8 HDIG domain-containing protein compare
MMP_RS06170 +0.6 1.6 ABC transporter ATP-binding protein compare
MMP_RS06095 +0.6 1.7 ABC transporter ATP-binding protein compare
MMP_RS06385 +0.6 1.0 hypothetical protein compare
MMP_RS04290 +0.6 1.1 4Fe-4S binding protein compare
MMP_RS08250 +0.5 1.8 pyruvate kinase compare
MMP_RS02425 +0.5 1.1 hypothetical protein compare
MMP_RS02935 +0.5 2.2 A24 family peptidase compare
MMP_RS08380 +0.5 2.2 phosphatase PAP2 family protein compare
MMP_RS00640 +0.5 1.3 ABC transporter substrate-binding protein compare
MMP_RS07640 +0.5 1.2 mechanosensitive ion channel family protein compare
MMP_RS08490 +0.5 2.8 hypothetical protein compare
MMP_RS00540 +0.5 1.6 PLP-dependent aminotransferase family protein compare
MMP_RS06990 +0.5 1.8 CatB-related O-acetyltransferase compare
MMP_RS01630 +0.5 3.2 N-glycosylase/DNA lyase compare
MMP_RS02955 +0.5 0.9 DJ-1/PfpI family protein compare
MMP_RS08485 +0.5 2.3 tungstate ABC transporter substrate-binding protein WtpA compare
MMP_RS01635 +0.5 1.2 thiamine pyrophosphate-dependent enzyme compare
MMP_RS00555 +0.5 1.0 MFS transporter compare
MMP_RS08240 +0.5 1.9 methanogenesis marker 16 metalloprotein compare
MMP_RS04975 +0.5 2.2 hypothetical protein compare
MMP_RS01140 +0.5 0.6 molybdate ABC transporter permease subunit compare
MMP_RS06250 +0.5 1.4 hypothetical protein compare
MMP_RS00400 +0.5 1.9 tributyrin esterase compare
MMP_RS06300 +0.5 1.4 ABC transporter substrate-binding protein compare
MMP_RS08245 +0.5 1.4 DUF4013 domain-containing protein compare
MMP_RS07805 +0.5 1.5 ABC transporter permease compare
MMP_RS04345 +0.5 1.9 MFS transporter compare
MMP_RS03530 +0.5 1.6 tetratricopeptide repeat protein compare
MMP_RS02770 +0.5 0.9 hypothetical protein compare
MMP_RS04200 +0.5 1.2 DUF111 family protein compare
MMP_RS08390 +0.5 1.6 DUF5400 domain-containing protein compare
MMP_RS01070 +0.5 1.9 hypothetical protein compare
MMP_RS02320 +0.5 1.7 glutamate-cysteine ligase family protein compare
MMP_RS06575 +0.4 1.3 fluoride efflux transporter CrcB compare
MMP_RS05130 +0.4 3.3 DUF2226 domain-containing protein compare
MMP_RS03495 +0.4 1.7 Na/Pi cotransporter family protein compare
MMP_RS02730 +0.4 1.3 ModD protein compare
MMP_RS04145 +0.4 0.6 hypothetical protein compare
MMP_RS04420 +0.4 0.9 LysE family translocator compare
MMP_RS05270 +0.4 2.1 PEGA domain-containing protein compare
MMP_RS06555 +0.4 1.1 cupin domain-containing protein compare
MMP_RS02635 +0.4 1.2 class I SAM-dependent methyltransferase compare
MMP_RS05850 +0.4 0.6 Ldh family oxidoreductase compare
MMP_RS03900 +0.4 1.1 minichromosome maintenance protein MCM compare
MMP_RS00145 +0.4 2.1 ATP-dependent Clp protease proteolytic subunit compare
MMP_RS05490 +0.4 1.1 IMPACT family protein compare
MMP_RS05050 +0.4 1.7 substrate-binding domain-containing protein compare
MMP_RS05235 +0.4 1.2 exodeoxyribonuclease III compare
MMP_RS06070 +0.4 2.2 iron ABC transporter substrate-binding protein compare
MMP_RS05115 +0.4 1.5 50S ribosomal protein L11 methyltransferase compare
MMP_RS04600 +0.4 2.5 tetratricopeptide repeat protein compare
MMP_RS02215 +0.4 1.5 ECF transporter S component compare
MMP_RS00935 +0.4 1.6 MATE family efflux transporter compare
MMP_RS06860 +0.4 0.5 4Fe-4S binding protein compare
MMP_RS07590 +0.4 1.8 hypothetical protein compare
MMP_RS02630 +0.4 1.2 rubredoxin compare
MMP_RS06465 +0.4 1.7 NERD domain-containing protein compare


Specific Phenotypes

For 1 genes in this experiment

For nutrient t2 Sodium acetate in Methanococcus maripaludis S2

For nutrient t2 Sodium acetate across organisms