Experiment set3IT048 for Methanococcus maripaludis JJ

Compare to:

formate McAA riboflavin dropout

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS04415 +2.8 12.9 hypothetical protein compare
MMJJ_RS04005 +0.9 7.3 acetate--CoA ligase family protein compare
MMJJ_RS06505 +0.9 2.4 prephenate dehydratase compare
MMJJ_RS08130 +0.9 1.0 translation initiation factor IF-2 subunit gamma compare
MMJJ_RS03725 +0.8 2.1 sulfurtransferase TusA family protein compare
MMJJ_RS08935 +0.7 1.1 TIGR00288 family NYN domain-containing protein compare
MMJJ_RS07025 +0.7 3.3 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMJJ_RS04955 +0.7 4.2 tRNA pseudouridine(54/55) synthase Pus10 compare
MMJJ_RS07005 +0.6 2.6 transcription factor S compare
MMJJ_RS03360 +0.6 1.1 hypothetical protein compare
MMJJ_RS06675 +0.6 4.5 TIGR01212 family radical SAM protein compare
MMJJ_RS07935 +0.6 0.6 protein fwdD compare
MMJJ_RS03410 +0.6 2.2 hypothetical protein compare
MMJJ_RS08830 +0.6 3.2 hypothetical protein compare
MMJJ_RS08870 +0.6 0.9 2-isopropylmalate synthase compare
MMJJ_RS06680 +0.6 3.5 DUF366 family protein compare
MMJJ_RS06275 +0.5 2.7 hypothetical protein compare
MMJJ_RS06735 +0.5 3.6 cobalt ECF transporter T component CbiQ compare
MMJJ_RS06515 +0.5 4.0 ribonuclease III compare
MMJJ_RS07235 +0.5 4.4 coenzyme F420 hydrogenase subunit alpha compare
MMJJ_RS06950 +0.5 3.5 4-demethylwyosine synthase TYW1 compare
MMJJ_RS07920 +0.5 3.7 6-carboxytetrahydropterin synthase QueD compare
MMJJ_RS07010 +0.5 3.2 preprotein translocase subunit Sec61beta compare
MMJJ_RS09365 +0.5 1.6 hypothetical protein compare
MMJJ_RS04545 +0.5 1.6 PadR family transcriptional regulator compare
MMJJ_RS07225 +0.5 3.0 coenzyme F420 hydrogenase subunit gamma compare
MMJJ_RS06190 +0.5 3.6 7-cyano-7-deazaguanine synthase compare
MMJJ_RS06460 +0.5 3.0 cytochrome c compare
MMJJ_RS04105 +0.5 3.9 prepilin peptidase compare
MMJJ_RS06385 +0.5 2.1 hypothetical protein compare
MMJJ_RS03905 +0.5 2.4 ATP-binding cassette domain-containing protein compare
MMJJ_RS07220 +0.5 3.5 coenzyme F420 hydrogenase subunit beta compare
MMJJ_RS06440 +0.5 3.2 DUF4870 domain-containing protein compare
MMJJ_RS02125 +0.5 1.7 hypothetical protein compare
MMJJ_RS03605 +0.4 1.6 TIGR00297 family protein compare
MMJJ_RS06090 +0.4 2.4 hypothetical protein compare
MMJJ_RS07240 +0.4 3.8 MBL fold metallo-hydrolase compare
MMJJ_RS03775 +0.4 2.4 50S ribosomal protein L15e compare
MMJJ_RS06745 +0.4 2.6 energy-coupling factor ABC transporter permease compare
MMJJ_RS03250 +0.4 1.4 DUF2116 family Zn-ribbon domain-containing protein compare
MMJJ_RS06210 +0.4 2.0 hypothetical protein compare
MMJJ_RS05685 +0.4 2.4 class III signal peptide-containing protein compare
MMJJ_RS06500 +0.4 2.7 class I SAM-dependent methyltransferase compare
MMJJ_RS09145 +0.4 2.6 exodeoxyribonuclease III compare
MMJJ_RS00745 +0.4 1.5 hypothetical protein compare
MMJJ_RS07750 +0.4 1.3 class III signal peptide-containing protein compare
MMJJ_RS05040 +0.4 2.7 7-carboxy-7-deazaguanine synthase QueE compare
MMJJ_RS08515 +0.4 1.8 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMJJ_RS04375 +0.4 1.6 hypothetical protein compare
MMJJ_RS07915 +0.4 2.1 CBS domain-containing protein compare
MMJJ_RS05975 +0.4 2.6 sulfurtransferase TusA family protein compare
MMJJ_RS06800 +0.4 1.9 prefoldin subunit alpha compare
MMJJ_RS05580 +0.4 2.1 methanogenesis marker 9 domain-containing protein compare
MMJJ_RS05915 +0.4 1.1 multiprotein bridging factor aMBF1 compare
MMJJ_RS06580 +0.4 2.5 alanine dehydrogenase compare
MMJJ_RS05695 +0.4 1.3 class III signal peptide-containing protein compare
MMJJ_RS07445 +0.4 2.4 RlmF-related methyltransferase compare
MMJJ_RS06685 +0.4 3.0 S-layer protein compare
MMJJ_RS06205 +0.4 2.4 EamA family transporter compare
MMJJ_RS07210 +0.4 2.4 AmmeMemoRadiSam system protein B compare
MMJJ_RS09405 +0.3 1.4 hypothetical protein compare
MMJJ_RS06470 +0.3 2.4 tripartite tricarboxylate transporter permease compare
MMJJ_RS06810 +0.3 2.7 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha compare
MMJJ_RS07820 +0.3 2.7 bifunctional hexulose-6-phosphate synthase/ribonuclease regulator compare
MMJJ_RS06045 +0.3 2.4 hypothetical protein compare
MMJJ_RS04215 +0.3 2.9 DMT family transporter compare
MMJJ_RS05400 +0.3 1.6 CoA-binding protein compare
MMJJ_RS01855 +0.3 2.6 MBL fold metallo-hydrolase compare
MMJJ_RS08305 +0.3 2.0 peroxiredoxin compare
MMJJ_RS09050 +0.3 1.8 hypothetical protein compare
MMJJ_RS07985 +0.3 1.6 hypothetical protein compare
MMJJ_RS06770 +0.3 2.7 hypothetical protein compare
MMJJ_RS06585 +0.3 2.2 alanine racemase compare
MMJJ_RS06710 +0.3 2.6 TldD/PmbA family protein compare
MMJJ_RS07260 +0.3 2.2 PspC domain-containing protein compare
MMJJ_RS06055 +0.3 2.4 S-methyl-5-thioribose-1-phosphate isomerase compare
MMJJ_RS07450 +0.3 2.3 hypothetical protein compare
MMJJ_RS03205 +0.3 1.7 metallophosphoesterase compare
MMJJ_RS05335 +0.3 1.9 heavy metal-binding domain-containing protein compare
MMJJ_RS06740 +0.3 2.1 energy-coupling factor ABC transporter substrate-binding protein compare
MMJJ_RS08225 +0.3 1.4 peptidylprolyl isomerase compare
MMJJ_RS07280 +0.3 1.7 phosphomannomutase/phosphoglucomutase compare
MMJJ_RS09325 +0.3 1.9 hypothetical protein compare
MMJJ_RS03805 +0.3 0.8 hypothetical protein compare
MMJJ_RS06640 +0.3 2.1 YfcE family phosphodiesterase compare
MMJJ_RS06280 +0.3 2.3 hypothetical protein compare
MMJJ_RS08525 +0.3 1.5 peptidylprolyl isomerase compare
MMJJ_RS09295 +0.3 0.4 hypothetical protein compare
MMJJ_RS07800 +0.3 2.4 AMP-binding protein compare
MMJJ_RS07230 +0.3 2.0 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS00090 +0.3 2.1 4Fe-4S binding protein compare
MMJJ_RS02270 +0.3 1.8 HEPN domain-containing protein compare
MMJJ_RS01140 +0.3 1.2 helix-turn-helix domain-containing protein compare
MMJJ_RS06535 +0.3 2.4 UPF0104 family protein compare
MMJJ_RS01530 +0.3 0.9 YwbE family protein compare
MMJJ_RS08285 +0.3 2.1 class I SAM-dependent methyltransferase compare
MMJJ_RS07270 +0.3 2.2 ribonuclease HII compare
MMJJ_RS01010 +0.3 2.7 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS07795 +0.3 1.8 cupin domain-containing protein compare
MMJJ_RS09230 +0.3 1.2 hypothetical protein compare
MMJJ_RS03375 +0.3 1.3 hypothetical protein compare
MMJJ_RS07890 +0.3 1.7 pyrimidine dimer DNA glycosylase/endonuclease V compare
MMJJ_RS07200 +0.3 2.1 MFS transporter compare
MMJJ_RS05410 +0.3 1.6 RecB-family nuclease compare
MMJJ_RS00150 +0.3 1.3 DUF2180 family protein compare
MMJJ_RS05235 +0.3 2.3 Flp pilus assembly complex ATPase component TadA compare
MMJJ_RS09300 +0.3 0.7 hypothetical protein compare
MMJJ_RS08100 +0.3 1.5 hypothetical protein compare
MMJJ_RS01790 +0.3 2.1 pyridoxamine 5'-phosphate oxidase family protein compare
MMJJ_RS04345 +0.3 1.3 DUF2080 family transposase-associated protein compare
MMJJ_RS05900 +0.3 2.0 ATP-binding cassette domain-containing protein compare
MMJJ_RS00335 +0.3 1.2 chemotaxis protein CheW compare
MMJJ_RS07815 +0.3 1.8 2-oxoacid:acceptor oxidoreductase family protein compare
MMJJ_RS06590 +0.3 1.9 sodium:alanine symporter family protein compare
MMJJ_RS07825 +0.3 1.2 YciI family protein compare
MMJJ_RS05605 +0.2 1.1 hypothetical protein compare
MMJJ_RS07480 +0.2 2.0 FAD-dependent oxidoreductase compare
MMJJ_RS01795 +0.2 1.7 TIGR00266 family protein compare
MMJJ_RS05500 +0.2 2.2 hypothetical protein compare
MMJJ_RS06765 +0.2 2.0 hypothetical protein compare
MMJJ_RS04610 +0.2 1.2 ribosome assembly RNA-binding protein YhbY compare
MMJJ_RS03835 +0.2 0.7 DUF504 domain-containing protein compare
MMJJ_RS04850 +0.2 1.4 energy-coupling factor transporter transmembrane protein EcfT compare
MMJJ_RS07185 +0.2 0.9 DUF371 domain-containing protein compare
MMJJ_RS06100 +0.2 1.6 rubrerythrin compare
MMJJ_RS07810 +0.2 1.6 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMJJ_RS01300 +0.2 1.6 MarR family transcriptional regulator compare
MMJJ_RS08685 +0.2 1.8 phosphate ABC transporter permease subunit PstC compare
MMJJ_RS07215 +0.2 1.9 TIGR00341 family protein compare
MMJJ_RS06960 +0.2 2.0 CAP domain-containing protein compare
MMJJ_RS06235 +0.2 1.9 IGHMBP2 family helicase compare
MMJJ_RS08470 +0.2 0.9 ferredoxin family protein compare
MMJJ_RS05965 +0.2 1.9 MFS transporter compare
MMJJ_RS05690 +0.2 2.1 hypothetical protein compare
MMJJ_RS07885 +0.2 1.7 NERD domain-containing protein compare
MMJJ_RS06495 +0.2 0.8 hypothetical protein compare
MMJJ_RS07385 +0.2 1.7 ribosomal protein S18-alanine N-acetyltransferase compare
MMJJ_RS05520 +0.2 1.8 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein compare
MMJJ_RS07760 +0.2 1.3 GNAT family N-acetyltransferase compare
MMJJ_RS05385 +0.2 1.6 hypothetical protein compare
MMJJ_RS08165 +0.2 1.2 thermonuclease family protein compare
MMJJ_RS07205 +0.2 1.3 MTH895/ArsE family thioredoxin-like protein compare
MMJJ_RS06120 +0.2 1.5 DUF4013 domain-containing protein compare
MMJJ_RS06455 +0.2 1.7 YeeE/YedE family protein compare
MMJJ_RS06445 +0.2 1.9 hypothetical protein compare
MMJJ_RS08350 +0.2 1.9 heavy metal translocating P-type ATPase compare
MMJJ_RS06085 +0.2 1.1 proteasome assembly chaperone family protein compare
MMJJ_RS01955 +0.2 1.7 hypothetical protein compare
MMJJ_RS07365 +0.2 1.5 CatB-related O-acetyltransferase compare
MMJJ_RS02230 +0.2 1.7 hypothetical protein compare
MMJJ_RS05585 +0.2 1.6 hypothetical protein compare
MMJJ_RS05390 +0.2 1.7 tRNA pseudouridine(13) synthase TruD compare
MMJJ_RS04390 +0.2 1.6 rhomboid family intramembrane serine protease compare
MMJJ_RS02160 +0.2 1.2 amino acid ABC transporter permease compare
MMJJ_RS07695 +0.2 1.7 glycoside hydrolase family 15 protein compare
MMJJ_RS05700 +0.2 1.4 metallophosphoesterase compare
MMJJ_RS05715 +0.2 1.5 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS01670 +0.2 1.0 hypothetical protein compare
MMJJ_RS00145 +0.2 1.5 aquaporin family protein compare
MMJJ_RS03515 +0.2 1.1 GPR1/FUN34/YaaH family transporter compare
MMJJ_RS08270 +0.2 1.7 iron ABC transporter substrate-binding protein compare
MMJJ_RS05835 +0.2 1.7 bis-aminopropyl spermidine synthase family protein compare
MMJJ_RS06290 +0.2 1.2 DUF749 domain-containing protein compare
MMJJ_RS06550 +0.2 1.5 ABC transporter permease compare
MMJJ_RS09015 +0.2 1.4 SPFH domain-containing protein compare
MMJJ_RS08160 +0.2 1.2 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO compare
MMJJ_RS00900 +0.2 0.9 PC4/YdbC family ssDNA-binding protein compare
MMJJ_RS05960 +0.2 1.3 DUF169 domain-containing protein compare
MMJJ_RS07860 +0.2 1.0 hypothetical protein compare
MMJJ_RS05090 +0.2 0.9 MGMT family protein compare
MMJJ_RS03450 +0.2 1.1 hypothetical protein compare
MMJJ_RS01430 +0.2 1.3 hypothetical protein compare
MMJJ_RS09005 +0.2 1.6 N-6 DNA methylase compare
MMJJ_RS02180 +0.2 1.0 DHH family phosphoesterase compare
MMJJ_RS07610 +0.2 1.0 DUF2119 domain-containing protein compare
MMJJ_RS02165 +0.2 1.2 ABC transporter substrate-binding protein compare
MMJJ_RS08485 +0.2 0.9 Lrp/AsnC family transcriptional regulator compare
MMJJ_RS09360 +0.2 1.2 hypothetical protein compare
MMJJ_RS02895 +0.2 1.2 ATP-binding protein compare
MMJJ_RS05525 +0.2 1.1 GTP-binding protein compare
MMJJ_RS07255 +0.2 1.6 hypothetical protein compare
MMJJ_RS05980 +0.2 1.1 DUF5400 domain-containing protein compare
MMJJ_RS05355 +0.2 1.1 DUF2121 domain-containing protein compare
MMJJ_RS09330 +0.2 0.9 hypothetical protein compare
MMJJ_RS09390 +0.2 0.7 hypothetical protein compare
MMJJ_RS08030 +0.2 1.1 hypothetical protein compare
MMJJ_RS07905 +0.2 1.2 DUF89 domain-containing protein compare
MMJJ_RS05200 +0.2 1.3 TIGR04013 family B12-binding domain/radical SAM domain-containing protein compare
MMJJ_RS07830 +0.2 1.2 DUF1786 domain-containing protein compare
MMJJ_RS06790 +0.2 1.4 nucleotidyltransferase family protein compare
MMJJ_RS09065 +0.2 0.8 hypothetical protein compare
MMJJ_RS02965 +0.2 0.9 RimK-like ATPgrasp N-terminal domain-containing protein compare
MMJJ_RS05510 +0.2 1.1 archaellum operon transcriptional activator EarA family protein compare
MMJJ_RS04635 +0.2 0.7 DUF367 family protein compare
MMJJ_RS08745 +0.2 1.3 glycosyltransferase family 9 protein compare
MMJJ_RS03755 +0.2 0.9 hypothetical protein compare
MMJJ_RS06105 +0.2 1.1 DUF99 family protein compare
MMJJ_RS03290 +0.2 1.3 amidohydrolase compare
MMJJ_RS06555 +0.2 1.2 ATP-binding cassette domain-containing protein compare
MMJJ_RS08045 +0.2 1.2 transporter substrate-binding domain-containing protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in nutrient t1 experiments