Experiment set3IT036 for Methanococcus maripaludis JJ

Compare to:

formate McAA biotin dropout

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS04415 +2.5 10.7 hypothetical protein compare
MMJJ_RS08130 +1.2 1.2 translation initiation factor IF-2 subunit gamma compare
MMJJ_RS04005 +0.8 6.2 acetate--CoA ligase family protein compare
MMJJ_RS07750 +0.8 2.6 class III signal peptide-containing protein compare
MMJJ_RS03725 +0.8 2.8 sulfurtransferase TusA family protein compare
MMJJ_RS03585 +0.7 0.7 methanogenesis marker 6 protein compare
MMJJ_RS06680 +0.7 3.5 DUF366 family protein compare
MMJJ_RS03360 +0.6 1.2 hypothetical protein compare
MMJJ_RS06675 +0.5 4.1 TIGR01212 family radical SAM protein compare
MMJJ_RS04955 +0.5 3.4 tRNA pseudouridine(54/55) synthase Pus10 compare
MMJJ_RS07015 +0.5 0.7 PFL family protein compare
MMJJ_RS03775 +0.5 1.8 50S ribosomal protein L15e compare
MMJJ_RS08830 +0.5 2.3 hypothetical protein compare
MMJJ_RS07235 +0.5 4.0 coenzyme F420 hydrogenase subunit alpha compare
MMJJ_RS07220 +0.5 3.8 coenzyme F420 hydrogenase subunit beta compare
MMJJ_RS07225 +0.4 2.8 coenzyme F420 hydrogenase subunit gamma compare
MMJJ_RS06735 +0.4 3.1 cobalt ECF transporter T component CbiQ compare
MMJJ_RS06440 +0.4 2.8 DUF4870 domain-containing protein compare
MMJJ_RS01070 +0.4 0.6 PadR family transcriptional regulator compare
MMJJ_RS08515 +0.4 1.9 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMJJ_RS05975 +0.4 2.5 sulfurtransferase TusA family protein compare
MMJJ_RS07890 +0.4 2.3 pyrimidine dimer DNA glycosylase/endonuclease V compare
MMJJ_RS06460 +0.4 2.3 cytochrome c compare
MMJJ_RS06950 +0.4 2.8 4-demethylwyosine synthase TYW1 compare
MMJJ_RS02115 +0.4 2.9 class I SAM-dependent methyltransferase family protein compare
MMJJ_RS01670 +0.4 2.1 hypothetical protein compare
MMJJ_RS07920 +0.4 2.6 6-carboxytetrahydropterin synthase QueD compare
MMJJ_RS07240 +0.4 3.2 MBL fold metallo-hydrolase compare
MMJJ_RS06385 +0.4 1.7 hypothetical protein compare
MMJJ_RS06190 +0.4 2.9 7-cyano-7-deazaguanine synthase compare
MMJJ_RS04375 +0.4 1.3 hypothetical protein compare
MMJJ_RS04340 +0.4 1.5 hypothetical protein compare
MMJJ_RS06455 +0.4 3.0 YeeE/YedE family protein compare
MMJJ_RS04545 +0.4 1.4 PadR family transcriptional regulator compare
MMJJ_RS02665 +0.4 1.1 methyl-accepting chemotaxis protein compare
MMJJ_RS06085 +0.4 1.9 proteasome assembly chaperone family protein compare
MMJJ_RS06210 +0.4 1.9 hypothetical protein compare
MMJJ_RS07985 +0.4 1.5 hypothetical protein compare
MMJJ_RS06810 +0.3 2.9 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha compare
MMJJ_RS09295 +0.3 0.4 hypothetical protein compare
MMJJ_RS07260 +0.3 2.1 PspC domain-containing protein compare
MMJJ_RS07795 +0.3 1.7 cupin domain-containing protein compare
MMJJ_RS03575 +0.3 1.9 NUDIX hydrolase compare
MMJJ_RS05525 +0.3 1.8 GTP-binding protein compare
MMJJ_RS01100 +0.3 0.6 helix-turn-helix domain-containing protein compare
MMJJ_RS07205 +0.3 1.4 MTH895/ArsE family thioredoxin-like protein compare
MMJJ_RS07270 +0.3 2.3 ribonuclease HII compare
MMJJ_RS04105 +0.3 2.7 prepilin peptidase compare
MMJJ_RS06275 +0.3 1.6 hypothetical protein compare
MMJJ_RS08100 +0.3 1.6 hypothetical protein compare
MMJJ_RS08225 +0.3 1.5 peptidylprolyl isomerase compare
MMJJ_RS07025 +0.3 1.9 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMJJ_RS07765 +0.3 1.3 DMT family protein compare
MMJJ_RS01590 +0.3 0.8 adenine phosphoribosyltransferase compare
MMJJ_RS07210 +0.3 2.3 AmmeMemoRadiSam system protein B compare
MMJJ_RS00745 +0.3 1.2 hypothetical protein compare
MMJJ_RS06470 +0.3 2.1 tripartite tricarboxylate transporter permease compare
MMJJ_RS03445 +0.3 1.7 hypothetical protein compare
MMJJ_RS06205 +0.3 2.2 EamA family transporter compare
MMJJ_RS05765 +0.3 0.5 flagellar protein E compare
MMJJ_RS01010 +0.3 2.9 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS04350 +0.3 1.4 hypothetical protein compare
MMJJ_RS06745 +0.3 1.7 energy-coupling factor ABC transporter permease compare
MMJJ_RS06685 +0.3 2.5 S-layer protein compare
MMJJ_RS05685 +0.3 1.8 class III signal peptide-containing protein compare
MMJJ_RS06770 +0.3 2.3 hypothetical protein compare
MMJJ_RS05390 +0.3 2.3 tRNA pseudouridine(13) synthase TruD compare
MMJJ_RS05915 +0.3 0.8 multiprotein bridging factor aMBF1 compare
MMJJ_RS07230 +0.3 1.7 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS07215 +0.3 2.3 TIGR00341 family protein compare
MMJJ_RS09065 +0.3 1.7 hypothetical protein compare
MMJJ_RS01855 +0.3 2.0 MBL fold metallo-hydrolase compare
MMJJ_RS04815 +0.3 1.3 TIM barrel protein compare
MMJJ_RS00845 +0.3 1.8 hypothetical protein compare
MMJJ_RS05040 +0.3 2.0 7-carboxy-7-deazaguanine synthase QueE compare
MMJJ_RS08305 +0.3 1.5 peroxiredoxin compare
MMJJ_RS02230 +0.3 2.2 hypothetical protein compare
MMJJ_RS09360 +0.3 1.7 hypothetical protein compare
MMJJ_RS07800 +0.3 2.0 AMP-binding protein compare
MMJJ_RS00150 +0.3 1.5 DUF2180 family protein compare
MMJJ_RS08525 +0.3 1.6 peptidylprolyl isomerase compare
MMJJ_RS04215 +0.3 2.1 DMT family transporter compare
MMJJ_RS06790 +0.3 2.2 nucleotidyltransferase family protein compare
MMJJ_RS06585 +0.3 1.7 alanine racemase compare
MMJJ_RS06280 +0.3 1.9 hypothetical protein compare
MMJJ_RS07915 +0.3 1.4 CBS domain-containing protein compare
MMJJ_RS00145 +0.3 2.1 aquaporin family protein compare
MMJJ_RS08880 +0.3 1.2 IMPACT family protein compare
MMJJ_RS04635 +0.3 1.8 DUF367 family protein compare
MMJJ_RS07760 +0.3 1.3 GNAT family N-acetyltransferase compare
MMJJ_RS07495 +0.3 1.4 4Fe-4S binding protein compare
MMJJ_RS06515 +0.3 1.9 ribonuclease III compare
MMJJ_RS06765 +0.2 2.1 hypothetical protein compare
MMJJ_RS04295 +0.2 1.9 DUF2202 domain-containing protein compare
MMJJ_RS06500 +0.2 1.5 class I SAM-dependent methyltransferase compare
MMJJ_RS08165 +0.2 1.3 thermonuclease family protein compare
MMJJ_RS05350 +0.2 1.3 DUF192 domain-containing protein compare
MMJJ_RS03375 +0.2 0.9 hypothetical protein compare
MMJJ_RS02895 +0.2 1.7 ATP-binding protein compare
MMJJ_RS03025 +0.2 1.9 Ig-like domain-containing protein compare
MMJJ_RS07480 +0.2 1.8 FAD-dependent oxidoreductase compare
MMJJ_RS06120 +0.2 1.6 DUF4013 domain-containing protein compare
MMJJ_RS07595 +0.2 1.0 hypothetical protein compare
MMJJ_RS05605 +0.2 1.0 hypothetical protein compare
MMJJ_RS07280 +0.2 1.4 phosphomannomutase/phosphoglucomutase compare
MMJJ_RS02965 +0.2 1.1 RimK-like ATPgrasp N-terminal domain-containing protein compare
MMJJ_RS03515 +0.2 1.3 GPR1/FUN34/YaaH family transporter compare
MMJJ_RS00155 +0.2 1.7 DUF2193 domain-containing protein compare
MMJJ_RS05530 +0.2 0.7 roadblock/LC7 domain-containing protein compare
MMJJ_RS01955 +0.2 1.7 hypothetical protein compare
MMJJ_RS04850 +0.2 1.4 energy-coupling factor transporter transmembrane protein EcfT compare
MMJJ_RS08485 +0.2 0.9 Lrp/AsnC family transcriptional regulator compare
MMJJ_RS06580 +0.2 1.5 alanine dehydrogenase compare
MMJJ_RS01970 +0.2 1.0 hypothetical protein compare
MMJJ_RS06960 +0.2 1.8 CAP domain-containing protein compare
MMJJ_RS04390 +0.2 1.6 rhomboid family intramembrane serine protease compare
MMJJ_RS08410 +0.2 0.6 CBS domain-containing protein compare
MMJJ_RS05520 +0.2 1.5 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein compare
MMJJ_RS00630 +0.2 1.3 betaine/proline/choline family ABC transporter ATP-binding protein compare
MMJJ_RS00405 +0.2 1.0 flavodoxin family protein compare
MMJJ_RS03805 +0.2 0.8 hypothetical protein compare
MMJJ_RS06430 +0.2 1.2 haloacid dehalogenase compare
MMJJ_RS08685 +0.2 1.4 phosphate ABC transporter permease subunit PstC compare
MMJJ_RS05980 +0.2 1.3 DUF5400 domain-containing protein compare
MMJJ_RS00335 +0.2 0.9 chemotaxis protein CheW compare
MMJJ_RS05900 +0.2 1.5 ATP-binding cassette domain-containing protein compare
MMJJ_RS06540 +0.2 0.7 DUF2120 domain-containing protein compare
MMJJ_RS00980 +0.2 1.1 flavodoxin family protein compare
MMJJ_RS08350 +0.2 1.6 heavy metal translocating P-type ATPase compare
MMJJ_RS02270 +0.2 0.8 HEPN domain-containing protein compare
MMJJ_RS03040 +0.2 1.3 lactate utilization protein compare
MMJJ_RS07825 +0.2 0.9 YciI family protein compare
MMJJ_RS05695 +0.2 0.8 class III signal peptide-containing protein compare
MMJJ_RS07820 +0.2 1.4 bifunctional hexulose-6-phosphate synthase/ribonuclease regulator compare
MMJJ_RS03410 +0.2 0.9 hypothetical protein compare
MMJJ_RS06710 +0.2 1.4 TldD/PmbA family protein compare
MMJJ_RS05585 +0.2 1.3 hypothetical protein compare
MMJJ_RS00320 +0.2 1.0 chemotaxis protein CheD compare
MMJJ_RS05500 +0.2 1.6 hypothetical protein compare
MMJJ_RS07445 +0.2 1.4 RlmF-related methyltransferase compare
MMJJ_RS01800 +0.2 1.3 ADP-ribosylglycohydrolase family protein compare
MMJJ_RS07815 +0.2 1.2 2-oxoacid:acceptor oxidoreductase family protein compare
MMJJ_RS08285 +0.2 1.4 class I SAM-dependent methyltransferase compare
MMJJ_RS00640 +0.2 1.4 glycine betaine ABC transporter substrate-binding protein compare
MMJJ_RS03015 +0.2 1.3 Ig-like domain-containing protein compare
MMJJ_RS08360 +0.2 1.3 FprA family A-type flavoprotein compare
MMJJ_RS01595 +0.2 1.0 U32 family peptidase compare
MMJJ_RS06090 +0.2 1.0 hypothetical protein compare
MMJJ_RS04385 +0.2 1.3 hypothetical protein compare
MMJJ_RS05700 +0.2 1.2 metallophosphoesterase compare
MMJJ_RS07905 +0.2 1.2 DUF89 domain-containing protein compare
MMJJ_RS08560 +0.2 1.1 metal-dependent phosphohydrolase compare
MMJJ_RS05690 +0.2 1.5 hypothetical protein compare
MMJJ_RS06495 +0.2 0.6 hypothetical protein compare
MMJJ_RS03730 +0.2 0.8 SWIM zinc finger family protein compare
MMJJ_RS06535 +0.2 1.3 UPF0104 family protein compare
MMJJ_RS07200 +0.2 1.3 MFS transporter compare
MMJJ_RS05960 +0.2 1.1 DUF169 domain-containing protein compare
MMJJ_RS08045 +0.2 1.3 transporter substrate-binding domain-containing protein compare
MMJJ_RS04745 +0.2 1.0 cyclase family protein compare
MMJJ_RS06235 +0.2 1.3 IGHMBP2 family helicase compare
MMJJ_RS00500 +0.2 0.6 GNAT family N-acetyltransferase compare
MMJJ_RS03720 +0.2 0.9 DsrE family protein compare
MMJJ_RS04345 +0.2 0.7 DUF2080 family transposase-associated protein compare
MMJJ_RS07010 +0.2 0.8 preprotein translocase subunit Sec61beta compare
MMJJ_RS07255 +0.2 1.3 hypothetical protein compare
MMJJ_RS01310 +0.2 1.0 phenylacetate--CoA ligase compare
MMJJ_RS06080 +0.2 1.2 serine/threonine protein kinase compare
MMJJ_RS07860 +0.2 0.8 hypothetical protein compare
MMJJ_RS05510 +0.2 1.1 archaellum operon transcriptional activator EarA family protein compare
MMJJ_RS01395 +0.2 0.6 DUF1894 domain-containing protein compare
MMJJ_RS00860 +0.2 0.9 4Fe-4S binding protein compare
MMJJ_RS06640 +0.2 1.0 YfcE family phosphodiesterase compare
MMJJ_RS01825 +0.2 0.8 DNA repair and recombination protein RadB compare
MMJJ_RS07805 +0.1 0.8 ferredoxin family protein compare
MMJJ_RS07810 +0.1 1.1 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMJJ_RS05335 +0.1 0.9 heavy metal-binding domain-containing protein compare
MMJJ_RS00780 +0.1 1.1 M48 family metallopeptidase compare
MMJJ_RS08375 +0.1 1.1 ferritin compare
MMJJ_RS04260 +0.1 1.2 molybdopterin molybdotransferase MoeA compare
MMJJ_RS04510 +0.1 1.2 hypothetical protein compare
MMJJ_RS07830 +0.1 1.0 DUF1786 domain-containing protein compare
MMJJ_RS09300 +0.1 0.4 hypothetical protein compare
MMJJ_RS08890 +0.1 1.3 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS06925 +0.1 0.3 GMP synthase subunit A compare
MMJJ_RS04580 +0.1 1.1 2-phosphosulfolactate phosphatase compare
MMJJ_RS07680 +0.1 0.9 glucose-6-phosphate isomerase compare
MMJJ_RS04500 +0.1 0.9 hypothetical protein compare
MMJJ_RS01385 +0.1 1.1 PadR family transcriptional regulator compare
MMJJ_RS08030 +0.1 0.9 hypothetical protein compare
MMJJ_RS08450 +0.1 0.9 undecaprenyl-diphosphate phosphatase compare
MMJJ_RS05505 +0.1 1.3 hypothetical protein compare
MMJJ_RS09105 +0.1 1.1 AI-2E family transporter compare
MMJJ_RS09005 +0.1 1.2 N-6 DNA methylase compare
MMJJ_RS04300 +0.1 0.8 hypothetical protein compare
MMJJ_RS07365 +0.1 1.1 CatB-related O-acetyltransferase compare
MMJJ_RS06075 +0.1 0.9 DNA-binding protein Alba compare
MMJJ_RS06590 +0.1 1.0 sodium:alanine symporter family protein compare
MMJJ_RS04120 +0.1 0.8 amino acid ABC transporter ATP-binding protein compare
MMJJ_RS01265 +0.1 0.6 cupin domain-containing protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in nutrient t1 experiments