Experiment set3IT014 for Sinorhizobium meliloti 1021

Compare to:

L-Leucine nitrogen source

200 most detrimental genes:

  gene name fitness t score description  
SMc00656 +2.3 1.0 hypothetical protein compare
SMa0955 +1.9 2.4 GntR family transcriptional regulator compare
SMc02052 +1.9 1.3 hypothetical protein compare
SMa0734 +1.7 2.7 hypothetical protein compare
SMc00647 +1.6 3.5 ribosomal large subunit pseudouridine synthase compare
SMc03996 +1.5 4.1 thiamine-phosphate pyrophosphorylase compare
SMa0314 +1.4 3.2 hypothetical protein compare
SMc02989 +1.4 2.1 hypothetical protein compare
SMc04003 +1.4 1.0 50S ribosomal protein L36 compare
SM_b20882 +1.4 1.6 hypothetical protein compare
SMa0846 +1.4 1.5 transposase, fragment compare
SMc00427 +1.3 2.3 peptide chain release factor RF-3 protein compare
SMc00349 +1.3 5.2 GTP-binding protein LepA compare
SMc03863 +1.2 3.5 50S ribosomal protein L19 compare
SM_b21669 +1.2 1.6 hypothetical protein compare
SM_b21400 +1.2 1.9 hypothetical protein compare
SM_b21115 +1.2 2.2 response regulator protein compare
SMc02107 +1.2 1.3 hypothetical protein compare
SMc00369 +1.2 1.2 oxidoreductase compare
SMc03900 +1.2 8.6 cyclic beta-1,2-glucan ABc transporter compare
SMc00080 +1.2 1.2 hypothetical protein compare
SMc00458 +1.2 8.9 transcriptional regulator compare
SMc01091 +1.2 1.1 hypothetical protein compare
SMa1095 +1.2 0.8 hypothetical protein compare
SMc02504 +1.1 2.8 transcriptional regulator compare
SMc04452 +1.1 4.0 NADH dehydrogenase transmembrane protein compare
SMa1666 +1.1 2.9 hypothetical protein compare
SMa0417 +1.1 3.1 hypothetical protein compare
SMc02164 +1.1 1.9 fructokinase compare
SM_b20260 +1.1 1.5 hypothetical protein compare
SMc00522 +1.1 6.6 ATP-dependent RNA helicase compare
SM_b20375 +1.1 1.2 transcriptional regulator compare
SMc00540 +1.1 2.2 hypothetical protein compare
SMc03124 +1.1 2.0 periplasmic binding ABC transporter protein compare
SMc00320 +1.1 3.8 ribosome-binding factor A compare
SMc01275 +1.1 4.5 ribosomal large subunit pseudouridine synthase C protein compare
SMc01831 +1.1 2.0 urease accessory protein compare
SMc02354 +1.1 2.3 hypothetical protein compare
SM_b21698 +1.0 1.9 hypothetical protein compare
SMc00403 +1.0 3.3 NOL1/NOP2/SUN family signature protein compare
SMc00804 +1.0 1.3 hypothetical protein compare
SMc02591 +1.0 1.6 hypothetical protein compare
SMc03890 +1.0 3.4 transcriptional regulator compare
SMa0326 +1.0 2.3 short chain alcohol dehydrogenase-related dehydrogenase compare
SMa0543 +1.0 1.0 hypothetical protein compare
SMc02238 +1.0 1.4 hypothetical protein compare
SMc02261 +1.0 2.0 transcriptional regulator compare
SMc00150 +1.0 7.4 hypothetical protein compare
SM_b20746 +1.0 1.0 hypothetical protein compare
SM_b20098 +1.0 1.8 hypothetical protein compare
SMa1052 +1.0 1.0 hypothetical protein compare
SMc00761 +1.0 5.7 oxidoreductase compare
SMc00061 +1.0 2.7 hypothetical protein compare
SMc02084 +1.0 0.8 biopolymer transport transmembrane protein compare
SMc02561 +1.0 1.3 hypothetical protein compare
SMa1832 +1.0 2.1 hypothetical protein compare
SMc00799 +1.0 1.9 hypothetical protein compare
SM_b20398 +1.0 1.1 hypothetical protein compare
SMc01012 +1.0 1.1 hypothetical protein compare
SMc03012 +1.0 2.9 chemoreceptor glutamine deamidase CheD compare
SMc01427 +1.0 1.2 hypothetical protein compare
SMc04385 +0.9 1.8 L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) (from data) compare
SMc03051 +0.9 1.5 flagellar biosynthesis repressor FlbT compare
SMc04382 +0.9 8.5 beta-(1,2)-glucan production associated transmembrane protein compare
SMa5023 +0.9 1.5 hypothetical protein compare
SMc00194 +0.9 2.2 hypothetical protein compare
SMa1053 +0.9 1.0 hypothetical protein compare
SMa0874 +0.9 2.4 NodN dehydratase compare
SMa0714 +0.9 2.3 ABC transporter ATP-binding protein compare
SMa0286 +0.9 0.7 hypothetical protein compare
SMc02777 +0.9 2.1 transcriptional regulator compare
SMc02695 +0.9 2.9 GTP-dependent nucleic acid-binding protein EngD compare
SMc01509 +0.9 1.5 hypothetical protein compare
SMc02503 +0.9 3.2 hypothetical protein compare
SMc01024 +0.9 1.0 preprotein translocase subunit SecG compare
SM_b21412 +0.9 1.3 hypothetical protein compare
SMc02247 +0.9 0.7 signal peptide protein compare
SMc04174 +0.9 1.0 signal peptide protein compare
SM_b20018 +0.9 2.4 sugar ABC transporter substrate-binding protein compare
SMc00030 +0.9 1.6 hypothetical protein compare
SM_b21395 +0.9 1.3 hypothetical protein compare
SM_b21258 +0.8 2.2 adenylate cyclase compare
SMa2168 +0.8 1.2 tRNA-Met compare
SMc04881 +0.8 1.7 virulence associated protein compare
SMc01153 +0.8 0.4 enoyl-CoA hydratase compare
SMc02659 +0.8 1.4 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare
SMc04094 +0.8 1.1 hypothetical protein compare
SMc01984 +0.8 2.1 cytochrome-C oxidase transmembrane protein compare
SMc02046 +0.8 1.0 hypothetical protein compare
SM_b21343 +0.8 1.7 sugar uptake ABC transporter permease compare
SMc00789 +0.8 2.0 peptide ABC transporter ATP-binding protein compare
SMc03134 +0.8 1.5 hypothetical protein compare
SMc05009 +0.8 1.2 nodulation protein NolR compare
SMa1700 +0.8 0.9 hypothetical protein compare
SMa1896 +0.8 2.0 methionine sulfoxide reductase A compare
SMc01149 +0.8 2.3 hypothetical protein compare
SMc02121 +0.8 0.7 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, ATPase component (from data) compare
SMa2091 +0.8 1.5 hypothetical protein compare
SMc04246 +0.8 0.7 transmembrane signal peptide protein compare
SMa0050 +0.8 1.4 hypothetical protein compare
SMc02720 +0.8 1.5 ATP-dependent Clp protease proteolytic subunit compare
SM_b21687 +0.8 1.2 hypothetical protein compare
SMc02863 +0.8 2.4 recombination protein F compare
SMc00983 +0.8 1.8 hypothetical protein compare
SMc00565 +0.8 1.1 50S ribosomal protein L9 compare
SM_b20750 +0.8 0.8 dehydrogenase compare
SMc01698 +0.8 2.5 oxidoreductase compare
SMc00383 +0.8 1.7 glutathione S-transferase compare
SMc03842 +0.8 1.2 hypothetical protein compare
SMa1229 +0.8 3.7 FixL oxygen regulated histidine kinase compare
SM_b21283 +0.8 3.1 allantoicase compare
SMc02812 +0.8 1.3 hypothetical protein compare
SMc01907 +0.8 4.2 hypothetical protein compare
SM_b20692 +0.8 1.1 5-keto-D-gluconate 5-reductase compare
SM_b20684 +0.7 4.9 hypothetical protein compare
SMc01858 +0.7 0.9 S-adenosyl-methyltransferase MraW compare
SMa0841 +0.7 1.7 transposase, fragment compare
SMc04383 +0.7 1.8 putative hydrolase, required for lysine catabolism (from data) compare
SMc01315 +0.7 0.6 hypothetical protein compare
SM_b21562 +0.7 1.4 hypothetical protein compare
SM_b20221 +0.7 2.3 epoxide hydrolase compare
SMa0683 +0.7 2.1 Cation efflux protein compare
SMc00129 +0.7 3.6 sensor histidine kinase compare
SMc00650 +0.7 1.0 hypothetical protein compare
SM_b20698 +0.7 1.6 transporter compare
SMa0882 +0.7 0.6 hypothetical protein compare
SM_b21147 +0.7 2.4 choline uptake ABC transporter permease compare
SMc04092 +0.7 0.8 hypothetical protein compare
SMc04235 +0.7 2.6 tRNA-dihydrouridine synthase A compare
SMa1136 +0.7 1.4 hypothetical protein compare
SM_b21374 +0.7 1.8 tagatose kinase (EC 2.7.1.101) (from data) compare
SMc01001 +0.7 2.4 hypothetical protein compare
SMc01107 +0.7 3.2 hypothetical protein compare
SMc00337 +0.7 1.1 hypothetical protein compare
SMc00501 +0.7 2.6 hypothetical protein compare
SM_b21455 +0.7 1.4 hypothetical protein compare
SMc00116 +0.7 1.7 hypothetical protein compare
SMc01428 +0.7 0.8 cold shock transcription regulator protein compare
SM_b20760 +0.7 1.5 carbon-phosphorus lyase compare
SMc03970 +0.7 2.4 hypothetical protein compare
SMc00400 +0.7 1.9 signal peptide protein compare
SM_b21167 +0.7 1.4 reverse transcriptasematurase compare
SMc02051 +0.7 1.1 hypothetical protein compare
SMc03019 +0.7 1.9 flagellar motor switch protein G compare
SMa0520 +0.7 2.1 RpiR family transcriptional regulator compare
SMa0851 +0.7 2.4 NodH sulfotransferase compare
SMa0810 +0.7 1.7 nitrogen fixation protein FixU compare
SMc02975 +0.7 2.7 phosphoenolpyruvate carboxykinase regulator transcription regulator protein compare
SMa0992 +0.7 1.0 hypothetical protein compare
SMc01214 +0.7 2.1 zinc-containing alcohol dehydrogenase compare
SMc02181 +0.7 3.5 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase compare
SMc03066 +0.7 0.7 hypothetical protein compare
SMc00566 +0.7 1.7 hypothetical protein compare
SM_b20806 +0.7 1.8 hypothetical protein compare
SMc01634 +0.7 1.5 ABC transporter permease compare
SMa2011 +0.7 1.8 hypothetical protein compare
SMc03241 +0.7 2.9 hypothetical protein compare
SM_b20364 +0.7 1.3 iron ABC transporter permease compare
SMc00600 +0.6 1.6 molybdopterin MPT converting factor subunit 1 compare
SMc01262 +0.6 1.8 peptide deformylase compare
SM_b20370 +0.6 1.6 ATP-binding transport protein compare
SM_b20322 +0.6 1.7 TRAP-type small permease component compare
SMc01521 +0.6 1.6 nitrogen regulatory protein compare
SMc03162 +0.6 2.6 3-ketoglucose dehydratase (from data) compare
SMa2201 +0.6 1.1 hypothetical protein compare
SMc00169 +0.6 4.0 malic enzyme compare
SMa1913 +0.6 1.8 Na+/H+ antiporter compare
SMc03156 +0.6 2.4 hypothetical protein compare
SMc01573 +0.6 0.9 hypothetical protein compare
SMa1918 +0.6 1.6 hypothetical protein compare
SMc01193 +0.6 3.1 hypothetical protein compare
SM_b20628 +0.6 1.5 hypothetical protein compare
SMc04453 +0.6 0.6 hypothetical protein compare
SMa1445 +0.6 2.1 hypothetical protein compare
SM_b21576 +0.6 2.6 ArsR family transcriptional regulator compare
SMc03937 +0.6 3.3 adenylate/guanylate cyclase compare
SM_b20217 +0.6 1.3 hypothetical protein compare
SM_b21170 +0.6 1.8 guanylate kinase compare
SMc04052 +0.6 0.7 transcriptional regulator compare
SMa2023 +0.6 1.4 hypothetical protein compare
SMc04265 +0.6 1.9 hypothetical protein compare
SM_b20597 +0.6 1.2 hypothetical protein compare
SMa1188 +0.6 1.5 NosX accesory protein compare
SMa2307 +0.6 2.0 ABC transporter permease compare
SMa0848 +0.6 1.2 hypothetical protein compare
SM_b20725 +0.6 1.0 hypothetical protein compare
SMc02904 +0.6 1.0 hypothetical protein compare
SMc01834 +0.6 1.9 hypothetical protein compare
SMc01175 +0.6 2.2 oxidoreductase compare
SMa0754 +0.6 0.8 hypothetical protein compare
SMc00786 +0.6 3.9 periplasmic dipeptide-binding protein compare
SMc03824 +0.6 1.6 transcriptional regulator compare
SMc01717 +0.6 2.0 mercuric reductase compare
SM_b21377 +0.6 1.5 sugar uptake ABC transporter substrate-binding protein precursor compare
SM_b20530 +0.6 1.3 hypothetical protein compare
SMc01508 +0.6 0.8 hypothetical protein compare
SMc03024 +0.6 2.1 flagellar basal body rod protein FlgF compare
SMc01099 +0.6 1.6 tRNA pseudouridine synthase A compare
SMc04260 +0.6 2.6 transcriptional regulator compare
SM_b20081 +0.6 0.8 hypothetical protein compare


Specific Phenotypes

For 4 genes in this experiment

For nitrogen source L-Leucine in Sinorhizobium meliloti 1021

For nitrogen source L-Leucine across organisms