Experiment set32IT014 for Klebsiella michiganensis M5al

Compare to:

R2A with Vogels_fungal_media 0.8X

200 most important genes:

  gene name fitness t score description  
BWI76_RS04465 -11.1 -7.7 carbamoyl-phosphate synthase small subunit compare
BWI76_RS04470 -8.9 -9.8 carbamoyl phosphate synthase large subunit compare
BWI76_RS02995 -8.8 -12.2 aspartate carbamoyltransferase compare
BWI76_RS09645 -6.8 -2.5 thioredoxin-disulfide reductase compare
BWI76_RS10990 -6.3 -6.5 dihydroorotase compare
BWI76_RS09910 -5.5 -17.2 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS04510 -5.3 -3.4 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS19010 -5.2 -3.6 polysaccharide pyruvyl transferase yvff compare
BWI76_RS15110 -4.9 -17.5 putative excinuclease ABC subunit A compare
BWI76_RS15225 -4.8 -3.2 DeoR family transcriptional regulator compare
BWI76_RS27385 -4.5 -7.0 orotate phosphoribosyltransferase compare
BWI76_RS11965 -4.2 -6.0 orotidine-5'-phosphate decarboxylase compare
BWI76_RS19040 -4.0 -8.4 hypothetical protein compare
BWI76_RS15115 -3.7 -6.1 MFS transporter compare
BWI76_RS01210 -3.7 -2.0 tyrosine recombinase XerC compare
BWI76_RS09660 -3.4 -2.4 DNA translocase FtsK compare
BWI76_RS15825 -3.4 -2.3 hypothetical protein compare
BWI76_RS23265 -3.4 -4.6 hypothetical protein compare
BWI76_RS27390 -3.3 -4.1 ribonuclease PH compare
BWI76_RS00600 -3.2 -9.6 LacI family transcriptional regulator compare
BWI76_RS02530 -3.2 -2.4 tRNA dimethylallyltransferase compare
BWI76_RS13915 -3.1 -6.3 magnesium transport protein MgtC compare
BWI76_RS19035 -3.0 -8.3 dTDP-rhamnosyl transferase compare
BWI76_RS20895 -3.0 -5.7 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS23240 -2.9 -2.8 exonuclease V subunit gamma compare
BWI76_RS07070 -2.9 -4.6 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS13920 -2.9 -5.4 magnesium-translocating P-type ATPase compare
BWI76_RS06525 -2.6 -6.8 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS01615 -2.6 -9.6 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS23230 -2.6 -1.8 exodeoxyribonuclease V subunit beta compare
BWI76_RS15840 -2.6 -2.6 prophage protein compare
BWI76_RS21265 -2.5 -9.2 phosphoribosylformylglycinamidine synthase compare
BWI76_RS20350 -2.5 -6.3 amidophosphoribosyltransferase compare
BWI76_RS20355 -2.4 -2.4 colicin V production protein compare
BWI76_RS19060 -2.4 -15.9 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS19050 -2.3 -10.3 NAD(P)-dependent oxidoreductase compare
BWI76_RS15850 -2.1 -0.8 DUF1317 domain-containing protein compare
BWI76_RS01610 -2.1 -9.4 phosphoribosylamine--glycine ligase compare
BWI76_RS20970 -2.1 -2.3 phosphoribosylglycinamide formyltransferase compare
BWI76_RS19055 -2.0 -11.0 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS26075 -1.9 -4.8 DNA adenine methylase compare
BWI76_RS12090 -1.9 -1.3 HNH endonuclease compare
BWI76_RS27430 -1.9 -1.3 (p)ppGpp synthetase compare
BWI76_RS07065 -1.8 -5.5 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS01350 -1.8 -1.3 NAD(P)H-flavin reductase compare
BWI76_RS20965 -1.8 -1.9 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS01200 -1.7 -2.0 diaminopimelate epimerase compare
BWI76_RS06530 -1.7 -4.0 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS04160 -1.7 -5.8 phosphoserine phosphatase compare
BWI76_RS15860 -1.7 -1.7 adenine-specific DNA methyltransferase compare
BWI76_RS15830 -1.7 -2.1 hypothetical protein compare
BWI76_RS00400 -1.6 -0.9 glutamine synthetase compare
BWI76_RS00025 -1.6 -1.4 hypothetical protein compare
BWI76_RS12285 -1.6 -2.8 hypothetical protein compare
BWI76_RS05120 -1.5 -9.0 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS01220 -1.5 -7.0 DNA-dependent helicase II compare
BWI76_RS09635 -1.4 -1.5 amino acid ABC transporter ATP-binding protein compare
BWI76_RS12270 -1.4 -4.0 hypothetical protein compare
BWI76_RS21370 -1.4 -1.4 ATP-dependent RNA helicase SrmB compare
BWI76_RS24900 -1.3 -1.9 DeoR family transcriptional regulator compare
BWI76_RS26425 -1.3 -7.0 zinc/cadmium/mercury/lead-transporting ATPase compare
BWI76_RS26185 -1.3 -1.9 thiosulfate sulfurtransferase compare
BWI76_RS16195 -1.3 -1.5 hypothetical protein compare
BWI76_RS26665 -1.3 -2.8 DNA-binding response regulator compare
BWI76_RS12275 -1.3 -7.6 hypothetical protein compare
BWI76_RS12260 -1.3 -4.4 hypothetical protein compare
BWI76_RS12255 -1.3 -9.6 hypothetical protein compare
BWI76_RS19070 -1.3 -8.5 rhamnosyltransferase compare
BWI76_RS26085 -1.3 -0.8 3-dehydroquinate synthase compare
BWI76_RS00355 -1.2 -3.1 DNA polymerase I compare
BWI76_RS12240 -1.2 -5.3 terminase small subunit compare
BWI76_RS11525 -1.2 -2.2 HNH endonuclease compare
BWI76_RS21395 -1.2 -2.7 DTW domain-containing protein compare
BWI76_RS03180 -1.2 -1.3 phage transcriptional regulator, AlpA compare
BWI76_RS12265 -1.2 -4.5 hypothetical protein compare
BWI76_RS27440 -1.2 -2.7 DNA helicase RecG compare
BWI76_RS14300 -1.2 -1.8 hypothetical protein compare
BWI76_RS26440 -1.1 -1.4 hypothetical protein compare
BWI76_RS01580 -1.1 -2.9 hypothetical protein compare
BWI76_RS04525 -1.1 -2.0 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS02735 -1.1 -1.7 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS01205 -1.1 -3.0 DUF484 family protein compare
BWI76_RS07475 -1.1 -1.2 DNA-binding transcriptional regulator RamA compare
BWI76_RS15290 -1.1 -1.4 transcriptional regulator compare
BWI76_RS22935 -1.1 -1.9 L-fucose mutarotase compare
BWI76_RS00720 -1.1 -2.2 DNA-binding response regulator compare
BWI76_RS18200 -1.0 -3.4 copper homeostasis protein CutC compare
BWI76_RS01115 -1.0 -1.9 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS06340 -1.0 -1.2 hypothetical protein compare
BWI76_RS12245 -1.0 -5.5 hypothetical protein compare
BWI76_RS08750 -1.0 -1.4 kinase inhibitor compare
BWI76_RS05835 -1.0 -2.6 gamma-glutamyl-phosphate reductase compare
BWI76_RS13595 -1.0 -2.7 transcriptional regulator compare
BWI76_RS12170 -1.0 -2.1 hypothetical protein compare
BWI76_RS14980 -1.0 -2.0 hypothetical protein compare
BWI76_RS05200 -1.0 -1.5 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS17300 -1.0 -1.5 tRNA-Tyr compare
BWI76_RS16485 -1.0 -1.3 ribonuclease T compare
BWI76_RS14775 -1.0 -1.8 creatinine amidohydrolase compare
BWI76_RS20845 -1.0 -2.3 GDP-mannose pyrophosphatase NudK compare
BWI76_RS09655 -1.0 -2.6 leucine-responsive regulatory protein compare
BWI76_RS02815 -1.0 -1.0 fructose-bisphosphatase class I compare
BWI76_RS21245 -1.0 -3.5 nitrogen regulatory protein P-II compare
BWI76_RS15835 -0.9 -0.7 hypothetical protein compare
BWI76_RS05355 -0.9 -2.7 methionine ABC transporter substrate-binding protein MetQ compare
BWI76_RS10035 -0.9 -1.6 hypothetical protein compare
BWI76_RS12515 -0.9 -1.7 protease compare
BWI76_RS26630 -0.9 -2.6 pimeloyl-[acyl-carrier protein] methyl ester esterase compare
BWI76_RS25700 -0.9 -4.7 heavy metal-responsive transcriptional regulator compare
BWI76_RS11155 -0.9 -1.5 penicillin-binding protein activator LpoB compare
BWI76_RS20650 -0.9 -1.3 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS05465 -0.9 -1.3 amidohydrolase compare
BWI76_RS12250 -0.9 -5.8 terminase compare
BWI76_RS04715 -0.9 -0.8 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS17955 -0.9 -2.2 hypothetical protein compare
BWI76_RS14320 -0.9 -1.7 hypothetical protein compare
BWI76_RS01545 -0.9 -1.3 thiamine biosynthesis protein ThiS compare
BWI76_RS16955 -0.9 -1.0 hypothetical protein compare
BWI76_RS07855 -0.9 -1.3 PucR family transcriptional regulator compare
BWI76_RS01935 -0.9 -1.0 thiamin phosphate synthase compare
BWI76_RS19905 -0.9 -3.2 OmpK36 porin compare
BWI76_RS27505 -0.9 -1.8 septal ring assembly protein ZapB compare
BWI76_RS20155 -0.9 -1.2 NADH-quinone oxidoreductase subunit I compare
BWI76_RS12195 -0.9 -2.3 hypothetical protein compare
BWI76_RS12390 -0.9 -2.4 antibiotic biosynthesis monooxygenase compare
BWI76_RS11700 -0.9 -1.1 hypothetical protein compare
BWI76_RS07985 -0.9 -0.9 fluoride ion transporter CrcB compare
BWI76_RS24115 -0.8 -2.6 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family compare
BWI76_RS08380 -0.8 -1.2 endonuclease VIII compare
BWI76_RS14770 -0.8 -1.2 PTS IIA 2 domain protein compare
BWI76_RS01565 -0.8 -1.3 NADH pyrophosphatase compare
BWI76_RS06830 -0.8 -2.8 recombination protein RecR compare
BWI76_RS09650 -0.8 -3.2 hypothetical protein compare
BWI76_RS08535 -0.8 -1.6 translocation protein TolB compare
BWI76_RS00085 -0.8 -2.9 hypothetical protein compare
BWI76_RS24500 -0.8 -1.6 urease subunit gamma compare
BWI76_RS20750 -0.8 -1.0 carboxysome structural protein EutK compare
BWI76_RS09755 -0.8 -2.3 phosphoserine transaminase compare
BWI76_RS24880 -0.8 -3.3 PTS galactitol transporter subunit IIA compare
BWI76_RS03015 -0.8 -1.8 RNase E inhibitor protein compare
BWI76_RS20640 -0.8 -2.2 cysteine synthase A compare
BWI76_RS10725 -0.8 -2.1 hypothetical protein compare
BWI76_RS02580 -0.8 -0.7 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS14050 -0.8 -1.5 AP endonuclease, family 2 compare
BWI76_RS23885 -0.8 -1.1 2-octaprenylphenol hydroxylase compare
BWI76_RS12360 -0.8 -5.1 hypothetical protein compare
BWI76_RS01000 -0.8 -1.8 peptidyl-prolyl cis-trans isomerase compare
BWI76_RS23915 -0.8 -1.5 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS17195 -0.8 -1.9 hypothetical protein compare
BWI76_RS09500 -0.8 -1.7 arginine ABC transporter substrate-binding protein compare
BWI76_RS26775 -0.8 -2.4 endo-1,4-D-glucanase compare
BWI76_RS12855 -0.8 -1.4 enamine deaminase RidA compare
BWI76_RS22755 -0.8 -3.0 phosphoadenosine phosphosulfate reductase compare
BWI76_RS00240 -0.8 -1.4 FMN-binding protein MioC compare
BWI76_RS08530 -0.8 -1.3 protein TolA compare
BWI76_RS07255 -0.8 -1.8 hypothetical protein compare
BWI76_RS11170 -0.8 -1.1 hypothetical protein compare
BWI76_RS07510 -0.8 -1.9 hypothetical protein compare
BWI76_RS16360 -0.8 -1.2 electron transport complex subunit RsxB compare
BWI76_RS19710 -0.8 -1.6 NupC/NupG family nucleoside CNT transporter compare
BWI76_RS03925 -0.8 -2.5 N-acetyltransferase GCN5 compare
BWI76_RS18580 -0.7 -1.5 hypothetical protein compare
BWI76_RS25320 -0.7 -3.7 glutamate synthase compare
BWI76_RS19045 -0.7 -3.2 capsular polysaccharide biosynthesis protein compare
BWI76_RS21675 -0.7 -0.9 hypothetical protein compare
BWI76_RS07260 -0.7 -3.2 branched chain amino acid ABC transporter substrate-binding protein compare
BWI76_RS26000 -0.7 -3.8 aspartate aminotransferase family protein compare
BWI76_RS12085 -0.7 -1.7 regulatory protein CII from bacteriophage origin compare
BWI76_RS18575 -0.7 -1.7 transcriptional regulator compare
BWI76_RS06120 -0.7 -1.5 membrane protein compare
BWI76_RS18855 -0.7 -1.9 cysteine desulfurase NifS compare
BWI76_RS02725 -0.7 -0.9 HxlR family transcriptional regulator compare
BWI76_RS20330 -0.7 -1.5 histidine/lysine/arginine/ornithine ABC transporter permease HisQ compare
BWI76_RS08385 -0.7 -0.9 citrate (Si)-synthase compare
BWI76_RS16920 -0.7 -1.1 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS22450 -0.7 -1.8 selenoprotein W-related protein compare
BWI76_RS13180 -0.7 -1.4 multidrug transporter EmrA compare
BWI76_RS09080 -0.7 -1.4 molybdopterin-synthase adenylyltransferase MoeB compare
BWI76_RS08650 -0.7 -1.6 molybdate ABC transporter permease compare
BWI76_RS12190 -0.7 -2.3 glycoside hydrolase family protein compare
BWI76_RS12235 -0.7 -0.7 hypothetical protein compare
BWI76_RS00010 -0.7 -3.0 DNA replication and repair protein RecF compare
BWI76_RS27565 -0.7 -3.4 sugar aldolase compare
BWI76_RS26110 -0.7 -2.1 hypothetical protein compare
BWI76_RS15705 -0.7 -3.0 putative holin protein compare
BWI76_RS13380 -0.7 -1.7 hypothetical protein compare
BWI76_RS12105 -0.7 -1.7 hypothetical protein compare
BWI76_RS27915 -0.7 -1.1 YceK/YidQ family lipoprotein compare
BWI76_RS02695 -0.7 -3.0 peptidyl-prolyl cis-trans isomerase compare
BWI76_RS08345 -0.7 -1.7 Nif3-like dinuclear metal center protein compare
BWI76_RS09870 -0.6 -4.0 aromatic amino acid aminotransferase compare
BWI76_RS12405 -0.6 -3.0 diguanylate phosphodiesterase compare
BWI76_RS24920 -0.6 -1.5 YraN family protein compare
BWI76_RS14970 -0.6 -1.1 pyrroline-5-carboxylate reductase compare
BWI76_RS17775 -0.6 -1.3 hypothetical protein compare
BWI76_RS22365 -0.6 -1.7 hydrogenase expression/formation protein HypE compare
BWI76_RS17805 -0.6 -0.8 membrane protein compare
BWI76_RS14925 -0.6 -2.8 ABC transporter substrate-binding protein compare
BWI76_RS09275 -0.6 -1.7 major capsid protein compare
BWI76_RS03595 -0.6 -0.5 ethanolamine utilization protein EutM compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in supernatant control:fungal media experiments

For supernatant control:fungal media Vogels_fungal_media, filtered across organisms