Experiment set2S71 for Erwinia amylovora T8

200 most detrimental genes:

gene	name	fitness	t score	description
OLJFJH_01800		+3.3	2.8	Type VI secretion system core protein
OLJFJH_18120		+3.3	2.9	preprotein translocase subunit YajC
OLJFJH_04440		+3.3	18.8	MurR/RpiR family transcriptional regulator
OLJFJH_08390		+2.6	1.8	DUF4365 domain-containing protein
OLJFJH_12765		+2.5	1.6	chemotaxis regulatory protein CheY
OLJFJH_04620		+2.5	3.1	Inversin
OLJFJH_09390		+2.4	1.6	Transposase
OLJFJH_01370		+2.2	4.3	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA
OLJFJH_11560		+2.1	4.9	transcriptional regulator RcsB
OLJFJH_14825		+1.9	8.3	type VI secretion system membrane subunit TssM
OLJFJH_15040		+1.9	1.4	Invasion protein B family
OLJFJH_11565		+1.9	9.3	phosphotransferase RcsD
OLJFJH_01790		+1.9	5.3	serine/threonine protein kinase
OLJFJH_11895		+1.9	1.5	hypothetical protein
OLJFJH_12370		+1.7	1.3	hypothetical protein
OLJFJH_13140		+1.7	0.9	YcgN family cysteine cluster protein
OLJFJH_13040		+1.7	1.3	transcription antiterminator/RNA stability regulator CspE
OLJFJH_12285		+1.7	2.1	hypothetical protein
OLJFJH_01670		+1.7	1.9	DNA-3-methyladenine glycosylase I
OLJFJH_08505		+1.6	1.6	YggL 50S ribosome-binding protein
OLJFJH_11555		+1.6	9.6	two-component system sensor histidine kinase/response regulator
OLJFJH_02515		+1.5	2.2	N-acetylmuramoyl-L-alanine amidase AmiB
OLJFJH_17480		+1.5	3.0	hypothetical protein
OLJFJH_17335		+1.4	1.8	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF
OLJFJH_01900		+1.4	1.6	type VI secretion system lipoprotein TssJ
OLJFJH_08135		+1.4	4.0	RNA polymerase subunit sigma
OLJFJH_04885		+1.4	1.8	hypothetical protein
OLJFJH_13880		+1.4	1.4	two-component system response regulator RstA
OLJFJH_17795		+1.4	2.8	LysR family transcriptional regulator
OLJFJH_01325		+1.4	1.5	thiamine ABC transporter ATP-binding protein ThiQ
OLJFJH_04050		+1.3	1.7	cytosine deaminase
OLJFJH_03735		+1.3	1.5	hypothetical protein
OLJFJH_08340		+1.3	1.1	hypothetical protein
OLJFJH_18135		+1.3	2.4	glycosyltransferase
OLJFJH_05975		+1.3	1.2	hypothetical protein
OLJFJH_06485		+1.3	2.4	carboxymethylenebutenolidase
OLJFJH_18140		+1.3	1.1	glucosyltransferase domain-containing protein
OLJFJH_15360		+1.2	2.2	flagellar motor switch protein FliG
OLJFJH_14820		+1.2	7.3	type IVB secretion system protein IcmH/DotU
OLJFJH_17190		+1.2	1.7	zinc ribbon-containing protein
OLJFJH_12020		+1.2	3.1	UDP-galactose-lipid carrier transferase
OLJFJH_02730		+1.2	0.9	hypothetical protein
OLJFJH_10625		+1.2	1.8	thioredoxin-dependent thiol peroxidase
OLJFJH_07040		+1.2	1.5	hypothetical protein
OLJFJH_07800		+1.2	4.4	AraC-type DNA-binding domain and AraC-containing proteins
OLJFJH_05695		+1.2	1.0	tyrosine-type recombinase/integrase
OLJFJH_00495		+1.2	4.9	Rcs stress response system protein RcsF
OLJFJH_05640		+1.1	2.3	ImmA/IrrE family metallo-endopeptidase
OLJFJH_04945		+1.1	1.0	hypothetical protein
OLJFJH_15795		+1.1	1.7	UvrY/SirA/GacA family response regulator transcription factor
OLJFJH_06150		+1.1	3.8	HTH-type transcriptional repressor FabR
OLJFJH_07190		+1.1	2.8	ribosome assembly RNA-binding protein YhbY
OLJFJH_11915		+1.1	2.2	chorismate mutase
OLJFJH_17565		+1.1	1.0	Uncharacterized protein HI1418
OLJFJH_05255		+1.1	1.0	hypothetical protein
OLJFJH_07565		+1.1	1.5	transcriptional regulator
OLJFJH_16855		+1.1	0.8	homeobox protein YbgS
OLJFJH_02965		+1.1	1.0	phosphoribosylamine--glycine ligase
OLJFJH_17390		+1.1	1.8	leucine-rich repeat domain-containing protein
OLJFJH_12440		+1.1	3.0	manganese/iron ABC transporter ATP-binding protein
OLJFJH_03945		+1.1	0.9	peptidylprolyl isomerase
OLJFJH_09815		+1.0	2.0	hypothetical protein
OLJFJH_12275		+1.0	1.9	AsnC family transcriptional regulator
OLJFJH_07640		+1.0	1.1	hypothetical protein
OLJFJH_09525		+1.0	1.2	IpaD/SipD/SspD family type III secretion system needle tip protein
OLJFJH_12915		+1.0	1.6	sugar phosphate isomerase/epimerase
OLJFJH_01820		+1.0	2.1	hypothetical protein
OLJFJH_11110		+1.0	2.4	cytochrome c-type biogenesis protein CcmH
OLJFJH_14755		+1.0	1.5	osmotically-inducible lipoprotein OsmE
OLJFJH_01810		+1.0	2.4	type VI secretion system baseplate subunit TssE
OLJFJH_08150		+1.0	3.1	AAA family ATPase
OLJFJH_03395		+1.0	1.0	hypothetical protein
OLJFJH_15365		+1.0	1.1	flagellar assembly protein FliH
OLJFJH_01860		+1.0	1.0	hypothetical protein
OLJFJH_11130		+1.0	1.6	acetyl-CoA C-acyltransferase FadI
OLJFJH_05745		+1.0	1.4	DUF4102 domain-containing protein
OLJFJH_08585		+1.0	1.2	SprT family zinc-dependent metalloprotease
OLJFJH_08030		+1.0	1.7	LysR family transcriptional regulator AmpR
OLJFJH_01830		+1.0	3.9	FHA domain-containing protein
OLJFJH_08355		+1.0	1.2	hypothetical protein
OLJFJH_15465		+1.0	1.8	beta-N-acetylhexosaminidase
OLJFJH_10740		+1.0	0.9	protein YpfM
OLJFJH_03375		+1.0	4.6	permease
OLJFJH_14195		+0.9	1.1	hypothetical protein
OLJFJH_06725		+0.9	1.6	fimbrial protein
OLJFJH_11570		+0.9	1.5	MFS transporter
OLJFJH_00970		+0.9	1.3	cobalt ABC transporter ATP-binding protein
OLJFJH_06055		+0.9	1.1	ribonuclease E activity regulator RraA
OLJFJH_16705		+0.9	1.0	molybdopterin synthase catalytic subunit MoaE
OLJFJH_11160		+0.9	0.9	penicillin-insensitive murein endopeptidase
OLJFJH_15000		+0.9	0.5	type III secretion system export apparatus subunit SctT
OLJFJH_02740		+0.9	1.6	hypothetical protein
OLJFJH_07300		+0.9	1.1	anaerobic ribonucleoside-triphosphate reductase-activating protein
OLJFJH_01805		+0.9	4.0	type VI secretion system baseplate subunit TssF
OLJFJH_12215		+0.9	1.9	DUF496 domain-containing protein
OLJFJH_09675		+0.9	1.4	hypothetical protein
OLJFJH_08410		+0.9	1.0	hypothetical protein
OLJFJH_05710		+0.9	2.1	AlpA family phage regulatory protein
OLJFJH_11375		+0.9	1.4	sugar phosphatase
OLJFJH_08815		+0.9	1.3	Membrane-bound toxin component of toxin-antitoxin system
OLJFJH_06855		+0.9	3.3	tRNA dihydrouridine synthase DusB
OLJFJH_05680		+0.9	1.2	hypothetical protein
OLJFJH_10290		+0.9	0.8	phosphatidylglycerophosphatase C
OLJFJH_05405		+0.8	2.0	ribose ABC transporter substrate-binding protein RbsB
OLJFJH_09810		+0.8	1.7	transcriptional repressor MprA
OLJFJH_08605		+0.8	1.3	YidB-like protein
OLJFJH_14600		+0.8	1.5	hypothetical protein
OLJFJH_08165		+0.8	1.0	Hrp pili protein HrpA
OLJFJH_14385		+0.8	0.7	electron transport complex subunit RsxE
OLJFJH_15765		+0.8	1.7	transposase
OLJFJH_05245		+0.8	0.6	phage holin lambda family
OLJFJH_01030		+0.8	2.7	aminotransferase
OLJFJH_07215		+0.8	1.3	preprotein translocase subunit SecG
OLJFJH_09235		+0.8	3.5	two-component sensor histidine kinase BarA
OLJFJH_14140		+0.8	1.4	5'-nucleotidase lipoprotein e(P4) family
OLJFJH_16520		+0.8	1.4	imidazolonepropionase
OLJFJH_04635		+0.8	2.2	hypothetical protein
OLJFJH_15370		+0.8	1.0	flagellum-specific ATP synthase FliI
OLJFJH_09960		+0.8	1.4	flagellar motor switch protein FliN
OLJFJH_15890		+0.8	1.5	heat shock protein HspQ
OLJFJH_15510		+0.8	3.6	cell division protein YceG
OLJFJH_05980		+0.8	1.9	phenazine biosynthesis protein PhzF family
OLJFJH_14080		+0.8	2.5	virulence factor
OLJFJH_17030		+0.8	1.3	two-component system response regulator KdpE
OLJFJH_06250		+0.8	1.2	peptidylprolyl isomerase PpiC
OLJFJH_16305		+0.8	2.3	putrescine ABC transporter ATP-binding subunit PotG
OLJFJH_04625		+0.8	1.2	hypothetical protein
OLJFJH_02950		+0.8	1.7	cupin domain-containing protein
OLJFJH_00855		+0.8	1.1	protein YacL
OLJFJH_12555		+0.7	1.7	RNA polymerase sigma factor FliA
OLJFJH_17955		+0.7	0.6	DNA-binding protein HU-beta
OLJFJH_14870		+0.7	1.4	sodium-potassium/proton antiporter ChaA
OLJFJH_13825		+0.7	1.8	N-acetylmuramoyl-L-alanine amidase
OLJFJH_11995		+0.7	1.4	Uncharacterized protein in cps region ORF2
OLJFJH_12700		+0.7	1.4	DUF1275 domain-containing protein
OLJFJH_11830		+0.7	1.2	LysR family transcriptional regulator
OLJFJH_15210		+0.7	3.2	Lactamase-B domain-containing protein
OLJFJH_09055		+0.7	3.8	phosphoenolpyruvate--protein phosphotransferase
OLJFJH_06695		+0.7	1.7	fimbrial protein
OLJFJH_05665		+0.7	0.7	hypothetical protein
OLJFJH_17890		+0.7	1.0	DNA-binding-1 domain-containing protein
OLJFJH_13585		+0.7	0.6	hypothetical protein
OLJFJH_11645		+0.7	0.9	Peptidoglycan/LPS O-acetylase OafA/YrhL contains acyltransferase and SGNH-hydrolase domains
OLJFJH_17810		+0.7	1.2	YbaB/EbfC family nucleoid-associated protein
OLJFJH_04715		+0.7	1.0	DUF1471 domain-containing protein
OLJFJH_01470		+0.7	1.0	molybdopterin adenylyltransferase
OLJFJH_06890		+0.7	1.3	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ
OLJFJH_17570		+0.7	1.9	hypothetical protein
OLJFJH_14670		+0.7	0.8	hypothetical protein
OLJFJH_10565		+0.7	2.7	polyphosphate kinase 1
OLJFJH_03680		+0.7	0.6	DUF1488 domain-containing protein
OLJFJH_13905		+0.7	1.1	DUF2534 domain-containing protein
OLJFJH_10090		+0.7	1.7	flagellar hook-associated protein FlgK
OLJFJH_12055		+0.7	1.1	Amylovoran biosynthesis glycosyltransferase AmsE
OLJFJH_12810		+0.7	1.9	hypothetical protein
OLJFJH_17185		+0.7	1.3	arginine transporter ATP-binding subunit
OLJFJH_05700		+0.7	0.8	site-specific integrase
OLJFJH_11710		+0.7	1.4	16S rRNA pseudouridine(516) synthase RsuA
OLJFJH_17710		+0.7	1.5	conjugal transfer protein TraB
OLJFJH_12270		+0.7	1.6	stress responsive protein
OLJFJH_14255		+0.7	1.6	DUF1283 domain-containing protein
OLJFJH_18380		+0.7	0.3	anti-adapter protein IraP
OLJFJH_09695		+0.7	1.2	GNAT family N-acetyltransferase
OLJFJH_06045		+0.7	1.1	aquaporin
OLJFJH_10065		+0.7	0.9	flagellar biosynthesis protein FlgF
OLJFJH_07515		+0.7	1.0	TA system toxin CbtA family protein
OLJFJH_15600		+0.6	1.8	flagellar basal-body rod protein FlgG
OLJFJH_04005		+0.6	0.7	YheU family protein
OLJFJH_13805		+0.6	1.2	DUF1318 domain-containing protein
OLJFJH_09955		+0.6	2.0	flagellar motor switch protein FliM
OLJFJH_11635		+0.6	0.7	putative Pol polyprotein
OLJFJH_11080		+0.6	0.9	heme exporter protein CcmB
OLJFJH_18235		+0.6	1.1	recombination-associated protein RdgC
OLJFJH_16250		+0.6	2.2	N-acetylmuramoyl-L-alanine amidase
OLJFJH_04955		+0.6	1.7	hypothetical protein
OLJFJH_16785		+0.6	1.6	pyridoxal phosphatase
OLJFJH_13935		+0.6	1.1	hypothetical protein
OLJFJH_09905		+0.6	1.6	chemotaxis response regulator protein-glutamate methylesterase
OLJFJH_07535		+0.6	1.2	Insertion element IS407 uncharacterized protein
OLJFJH_01390		+0.6	1.2	lysine transporter LysE
OLJFJH_01960		+0.6	1.0	DUF2946 domain-containing protein
OLJFJH_18365		+0.6	1.2	Conserved uncharacterized protein
OLJFJH_13255		+0.6	1.7	DNA topoisomerase III
OLJFJH_13415		+0.6	2.9	ABC transporter ATP-binding protein
OLJFJH_14830		+0.6	1.0	type VI secretion system-associated protein TagF
OLJFJH_07350		+0.6	0.5	hypothetical protein
OLJFJH_12085		+0.6	2.0	UDP-glucose 4-epimerase GalE
OLJFJH_12550		+0.6	1.8	HNH endonuclease
OLJFJH_15605		+0.6	1.7	flagellar biosynthesis protein FlgF
OLJFJH_18245		+0.6	1.2	AroM protein
OLJFJH_06395		+0.6	1.9	class I adenylate cyclase
OLJFJH_05660		+0.6	1.3	DUF4755 domain-containing protein
OLJFJH_01815		+0.6	2.2	protein of avirulence locus ImpE
OLJFJH_01145		+0.6	1.5	type II secretion system minor pseudopilin GspK
OLJFJH_12445		+0.6	1.0	iron ABC transporter substrate-binding protein
OLJFJH_06050		+0.6	0.6	Cell division protein ZapB
OLJFJH_18375		+0.6	0.7	hypothetical protein
OLJFJH_13740		+0.6	1.3	fimbrial protein
OLJFJH_16275		+0.6	2.1	arginine ABC transporter permease ArtQ
OLJFJH_14315		+0.6	1.0	oxidoreductase

Specific Phenotypes

None in this experiment