Experiment set2IT087 for Methanococcus maripaludis JJ

Compare to:

H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS04415 +1.2 3.5 hypothetical protein compare
MMJJ_RS08720 +0.9 7.5 UDP-glucose/GDP-mannose dehydrogenase family protein compare
MMJJ_RS08730 +0.9 7.2 glycosyltransferase family 4 protein compare
MMJJ_RS04720 +0.8 1.8 IMP dehydrogenase compare
MMJJ_RS08760 +0.8 6.1 glycosyltransferase family 9 protein compare
MMJJ_RS08025 +0.8 3.2 hypothetical protein compare
MMJJ_RS08750 +0.8 6.5 glycosyltransferase compare
MMJJ_RS08775 +0.7 5.5 PfkB family carbohydrate kinase compare
MMJJ_RS08780 +0.7 4.1 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
MMJJ_RS08765 +0.7 5.6 glycosyltransferase family 9 protein compare
MMJJ_RS09295 +0.6 0.9 hypothetical protein compare
MMJJ_RS06975 +0.6 1.9 protein translocase SEC61 complex subunit gamma compare
MMJJ_RS00420 +0.6 3.8 CBS domain-containing protein compare
MMJJ_RS01210 +0.6 2.8 hypothetical protein compare
MMJJ_RS07030 +0.6 5.3 hypothetical protein compare
MMJJ_RS03205 +0.6 4.2 metallophosphoesterase compare
MMJJ_RS07035 +0.6 0.8 glycosyl transferase compare
MMJJ_RS08725 +0.6 4.3 flippase compare
MMJJ_RS08715 +0.6 3.6 NAD-dependent epimerase/dehydratase family protein compare
MMJJ_RS08040 +0.5 4.3 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS09390 +0.5 1.6 hypothetical protein compare
MMJJ_RS07280 +0.5 3.6 phosphomannomutase/phosphoglucomutase compare
MMJJ_RS03410 +0.5 2.0 hypothetical protein compare
MMJJ_RS08785 +0.5 3.1 D-sedoheptulose 7-phosphate isomerase compare
MMJJ_RS07680 +0.5 3.6 glucose-6-phosphate isomerase compare
MMJJ_RS00415 +0.4 2.5 DedA family protein compare
MMJJ_RS01125 +0.4 2.3 hypothetical protein compare
MMJJ_RS05980 +0.4 2.8 DUF5400 domain-containing protein compare
MMJJ_RS08830 +0.4 1.9 hypothetical protein compare
MMJJ_RS01010 +0.4 3.5 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS03360 +0.4 0.7 hypothetical protein compare
MMJJ_RS04215 +0.3 3.1 DMT family transporter compare
MMJJ_RS09325 +0.3 2.0 hypothetical protein compare
MMJJ_RS08710 +0.3 2.5 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMJJ_RS06800 +0.3 2.1 prefoldin subunit alpha compare
MMJJ_RS05115 +0.3 1.4 P-II family nitrogen regulator compare
MMJJ_RS00480 +0.3 2.6 flippase compare
MMJJ_RS06720 +0.3 2.7 mechanosensitive ion channel family protein compare
MMJJ_RS06210 +0.3 2.3 hypothetical protein compare
MMJJ_RS04480 +0.3 1.1 hypothetical protein compare
MMJJ_RS06130 +0.3 1.5 hypothetical protein compare
MMJJ_RS03605 +0.3 1.8 TIGR00297 family protein compare
MMJJ_RS09300 +0.3 1.1 hypothetical protein compare
MMJJ_RS06430 +0.3 2.0 haloacid dehalogenase compare
MMJJ_RS08515 +0.3 1.0 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMJJ_RS05510 +0.3 2.3 archaellum operon transcriptional activator EarA family protein compare
MMJJ_RS01615 +0.3 1.3 MoaD/ThiS family protein compare
MMJJ_RS09065 +0.3 1.7 hypothetical protein compare
MMJJ_RS06205 +0.3 2.1 EamA family transporter compare
MMJJ_RS06275 +0.3 1.7 hypothetical protein compare
MMJJ_RS05870 +0.3 1.3 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMJJ_RS07690 +0.3 1.9 glycosyltransferase family 4 protein compare
MMJJ_RS03370 +0.3 1.1 hypothetical protein compare
MMJJ_RS01035 +0.3 1.3 hypothetical protein compare
MMJJ_RS05760 +0.3 2.4 flagellar protein F compare
MMJJ_RS07210 +0.3 2.0 AmmeMemoRadiSam system protein B compare
MMJJ_RS08705 +0.3 1.9 AEC family transporter compare
MMJJ_RS01825 +0.3 1.5 DNA repair and recombination protein RadB compare
MMJJ_RS06770 +0.3 2.1 hypothetical protein compare
MMJJ_RS06465 +0.2 1.8 hypothetical protein compare
MMJJ_RS04585 +0.2 1.7 phenylacetate--CoA ligase compare
MMJJ_RS07665 +0.2 2.3 formate dehydrogenase subunit alpha compare
MMJJ_RS08930 +0.2 1.9 5'/3'-nucleotidase SurE compare
MMJJ_RS05740 +0.2 2.1 archaellar assembly protein FlaJ compare
MMJJ_RS09370 +0.2 1.0 heavy-metal-associated domain-containing protein compare
MMJJ_RS06080 +0.2 2.0 serine/threonine protein kinase compare
MMJJ_RS05365 +0.2 1.5 DUF2798 domain-containing protein compare
MMJJ_RS06280 +0.2 2.0 hypothetical protein compare
MMJJ_RS06810 +0.2 2.0 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha compare
MMJJ_RS08370 +0.2 1.2 hypothetical protein compare
MMJJ_RS05040 +0.2 1.7 7-carboxy-7-deazaguanine synthase QueE compare
MMJJ_RS08615 +0.2 1.5 oligosaccharide repeat unit polymerase family protein compare
MMJJ_RS05505 +0.2 2.2 hypothetical protein compare
MMJJ_RS07645 +0.2 1.6 selenium-binding protein compare
MMJJ_RS03510 +0.2 1.5 acyl-CoA dehydratase activase compare
MMJJ_RS05195 +0.2 1.0 hypothetical protein compare
MMJJ_RS05250 +0.2 1.4 HDIG domain-containing protein compare
MMJJ_RS06105 +0.2 1.6 DUF99 family protein compare
MMJJ_RS06470 +0.2 1.5 tripartite tricarboxylate transporter permease compare
MMJJ_RS06120 +0.2 1.6 DUF4013 domain-containing protein compare
MMJJ_RS07420 +0.2 1.5 protease complex subunit PrcB family protein compare
MMJJ_RS07610 +0.2 1.3 DUF2119 domain-containing protein compare
MMJJ_RS03045 +0.2 1.4 hypothetical protein compare
MMJJ_RS05190 +0.2 1.3 gamma carbonic anhydrase family protein compare
MMJJ_RS05820 +0.2 1.1 DUF2304 domain-containing protein compare
MMJJ_RS02295 +0.2 1.9 hypothetical protein compare
MMJJ_RS09010 +0.2 1.0 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMJJ_RS05975 +0.2 1.4 sulfurtransferase TusA family protein compare
MMJJ_RS06755 +0.2 1.6 diadenylate cyclase compare
MMJJ_RS06295 +0.2 1.3 DUF2096 family protein compare
MMJJ_RS05745 +0.2 1.7 type II/IV secretion system ATPase subunit compare
MMJJ_RS09020 +0.2 1.0 hypothetical protein compare
MMJJ_RS06520 +0.2 1.7 TldD/PmbA family protein compare
MMJJ_RS06765 +0.2 1.7 hypothetical protein compare
MMJJ_RS06950 +0.2 1.4 4-demethylwyosine synthase TYW1 compare
MMJJ_RS05750 +0.2 1.5 flagellar accessory protein FlaH compare
MMJJ_RS00870 +0.2 1.3 F420-nonreducing hydrogenase compare
MMJJ_RS06190 +0.2 1.6 7-cyano-7-deazaguanine synthase compare
MMJJ_RS09255 +0.2 0.9 hypothetical protein compare
MMJJ_RS07255 +0.2 1.7 hypothetical protein compare
MMJJ_RS05785 +0.2 1.3 flagellin compare
MMJJ_RS04405 +0.2 1.0 hypothetical protein compare
MMJJ_RS03690 +0.2 1.2 indolepyruvate oxidoreductase subunit beta compare
MMJJ_RS01175 +0.2 1.5 hypothetical protein compare
MMJJ_RS03530 +0.2 1.5 phosphate ABC transporter substrate-binding protein compare
MMJJ_RS04135 +0.2 1.0 7-cyano-7-deazaguanine synthase QueC compare
MMJJ_RS01920 +0.2 1.4 phosphoglycerate mutase compare
MMJJ_RS01760 +0.2 1.1 N-acetyltransferase compare
MMJJ_RS03385 +0.2 1.1 hypothetical protein compare
MMJJ_RS04305 +0.2 1.6 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS05755 +0.2 1.4 flagellar protein G compare
MMJJ_RS01405 +0.2 0.3 proline--tRNA ligase compare
MMJJ_RS06585 +0.2 1.4 alanine racemase compare
MMJJ_RS07385 +0.2 1.3 ribosomal protein S18-alanine N-acetyltransferase compare
MMJJ_RS05035 +0.2 1.1 4Fe-4S binding protein compare
MMJJ_RS06440 +0.2 1.2 DUF4870 domain-containing protein compare
MMJJ_RS05200 +0.2 1.4 TIGR04013 family B12-binding domain/radical SAM domain-containing protein compare
MMJJ_RS03460 +0.2 1.3 hypothetical protein compare
MMJJ_RS06740 +0.2 1.0 energy-coupling factor ABC transporter substrate-binding protein compare
MMJJ_RS05925 +0.2 1.2 DUF2099 family protein compare
MMJJ_RS06055 +0.2 1.1 S-methyl-5-thioribose-1-phosphate isomerase compare
MMJJ_RS06945 +0.2 1.2 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
MMJJ_RS05335 +0.2 0.8 heavy metal-binding domain-containing protein compare
MMJJ_RS07445 +0.2 1.0 RlmF-related methyltransferase compare
MMJJ_RS00930 +0.2 0.9 queuosine precursor transporter compare
MMJJ_RS06135 +0.2 1.2 50S ribosomal protein L11 methyltransferase compare
MMJJ_RS05605 +0.2 1.0 hypothetical protein compare
MMJJ_RS04270 +0.2 0.9 DUF364 domain-containing protein compare
MMJJ_RS02245 +0.2 1.0 DUF432 domain-containing protein compare
MMJJ_RS05700 +0.2 1.1 metallophosphoesterase compare
MMJJ_RS01060 +0.2 0.9 ABC transporter ATP-binding protein compare
MMJJ_RS07865 +0.2 1.2 zinc ribbon domain-containing protein compare
MMJJ_RS00965 +0.2 0.9 cyclophilin-like fold protein compare
MMJJ_RS07920 +0.2 1.2 6-carboxytetrahydropterin synthase QueD compare
MMJJ_RS05730 +0.2 1.3 TIM barrel protein compare
MMJJ_RS07670 +0.2 1.3 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain compare
MMJJ_RS08365 +0.1 0.7 DsrE family protein compare
MMJJ_RS06710 +0.1 1.3 TldD/PmbA family protein compare
MMJJ_RS05235 +0.1 1.4 Flp pilus assembly complex ATPase component TadA compare
MMJJ_RS06085 +0.1 0.8 proteasome assembly chaperone family protein compare
MMJJ_RS08630 +0.1 1.0 signal recognition particle subunit SRP19/SEC65 family protein compare
MMJJ_RS05585 +0.1 1.0 hypothetical protein compare
MMJJ_RS05095 +0.1 1.3 ammonium transporter compare
MMJJ_RS08310 +0.1 0.9 ZIP family metal transporter compare
MMJJ_RS02340 +0.1 0.9 SAM-dependent methyltransferase compare
MMJJ_RS01110 +0.1 0.6 hypothetical protein compare
MMJJ_RS06445 +0.1 1.3 hypothetical protein compare
MMJJ_RS06460 +0.1 1.0 cytochrome c compare
MMJJ_RS04845 +0.1 1.2 ABC transporter substrate-binding protein compare
MMJJ_RS01265 +0.1 0.7 cupin domain-containing protein compare
MMJJ_RS01395 +0.1 0.8 DUF1894 domain-containing protein compare
MMJJ_RS05790 +0.1 1.0 flagellin compare
MMJJ_RS08445 +0.1 0.8 cell division ATPase MinD compare
MMJJ_RS04300 +0.1 0.9 hypothetical protein compare
MMJJ_RS04240 +0.1 1.1 molybdate ABC transporter substrate-binding protein compare
MMJJ_RS05890 +0.1 1.1 molybdate ABC transporter substrate-binding protein compare
MMJJ_RS05400 +0.1 0.6 CoA-binding protein compare
MMJJ_RS06515 +0.1 1.1 ribonuclease III compare
MMJJ_RS06160 +0.1 1.1 stage II sporulation protein M compare
MMJJ_RS04785 +0.1 0.9 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS03015 +0.1 1.1 Ig-like domain-containing protein compare
MMJJ_RS06550 +0.1 1.0 ABC transporter permease compare
MMJJ_RS05690 +0.1 1.2 hypothetical protein compare
MMJJ_RS08810 +0.1 0.2 DUF4040 domain-containing protein compare
MMJJ_RS06045 +0.1 0.9 hypothetical protein compare
MMJJ_RS04625 +0.1 0.9 SLC13 family permease compare
MMJJ_RS06960 +0.1 1.1 CAP domain-containing protein compare
MMJJ_RS05290 +0.1 1.1 DUF4013 domain-containing protein compare
MMJJ_RS04690 +0.1 1.0 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain compare
MMJJ_RS08400 +0.1 0.6 CoB--CoM heterodisulfide reductase subunit C compare
MMJJ_RS09050 +0.1 0.4 hypothetical protein compare
MMJJ_RS04055 +0.1 0.6 hypothetical protein compare
MMJJ_RS08580 +0.1 0.5 YkgJ family cysteine cluster protein compare
MMJJ_RS02115 +0.1 0.9 class I SAM-dependent methyltransferase family protein compare
MMJJ_RS07365 +0.1 0.9 CatB-related O-acetyltransferase compare
MMJJ_RS02075 +0.1 0.5 acyl-CoA thioesterase compare
MMJJ_RS07740 +0.1 0.8 DUF2334 domain-containing protein compare
MMJJ_RS09005 +0.1 1.1 N-6 DNA methylase compare
MMJJ_RS07915 +0.1 0.8 CBS domain-containing protein compare
MMJJ_RS08075 +0.1 1.0 ATP-dependent DNA helicase compare
MMJJ_RS07835 +0.1 0.9 UPF0489 family protein compare
MMJJ_RS09215 +0.1 1.0 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS04950 +0.1 1.0 TIGR00375 family protein compare
MMJJ_RS05695 +0.1 0.7 class III signal peptide-containing protein compare
MMJJ_RS05405 +0.1 0.9 DNA cytosine methyltransferase compare
MMJJ_RS09155 +0.1 0.9 RluA family pseudouridine synthase compare
MMJJ_RS06555 +0.1 1.0 ATP-binding cassette domain-containing protein compare
MMJJ_RS07480 +0.1 1.0 FAD-dependent oxidoreductase compare
MMJJ_RS04165 +0.1 0.9 sodium:solute symporter compare
MMJJ_RS02310 +0.1 0.8 ABC transporter ATP-binding protein compare
MMJJ_RS03350 +0.1 0.3 hypothetical protein compare
MMJJ_RS08345 +0.1 0.9 flavodoxin family protein compare
MMJJ_RS06685 +0.1 1.0 S-layer protein compare
MMJJ_RS04295 +0.1 0.9 DUF2202 domain-containing protein compare
MMJJ_RS04395 +0.1 0.9 hypothetical protein compare
MMJJ_RS04925 +0.1 0.9 cation:proton antiporter compare
MMJJ_RS06450 +0.1 0.8 DUF3343 domain-containing protein compare
MMJJ_RS03185 +0.1 0.2 alanine--tRNA ligase compare
MMJJ_RS00135 +0.1 0.7 FmdE family protein compare
MMJJ_RS04510 +0.1 0.9 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in rich t1 experiments