Experiment set2IT075 for Cupriavidus basilensis FW507-4G11

Compare to:

L-Glutamine carbon source

200 most important genes:

  gene name fitness t score description  
RR42_RS16265 -8.2 -5.6 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
RR42_RS01385 -7.0 -4.8 5,10-methylenetetrahydrofolate reductase compare
RR42_RS18305 -6.6 -4.6 anthranilate phosphoribosyltransferase compare
RR42_RS05860 -6.4 -4.4 phospho-2-dehydro-3-deoxyheptonate aldolase compare
RR42_RS06485 -6.4 -4.4 chorismate synthase compare
RR42_RS14390 -6.2 -4.3 3-isopropylmalate dehydratase compare
RR42_RS30655 -6.1 -4.2 LysR family transcriptional regulator compare
RR42_RS14365 -6.0 -4.1 N-(5'-phosphoribosyl)anthranilate isomerase compare
RR42_RS19005 -6.0 -4.1 3-dehydroquinate synthase compare
RR42_RS16255 -5.8 -8.9 sulfate adenylyltransferase compare
RR42_RS16250 -5.4 -7.3 sulfate adenylyltransferase compare
RR42_RS18300 -5.3 -6.3 anthranilate synthase subunit II compare
RR42_RS01160 -5.3 -12.2 homoserine O-acetyltransferase compare
RR42_RS16275 -4.9 -4.8 membrane protein compare
RR42_RS14400 -4.9 -5.8 isopropylmalate isomerase compare
RR42_RS07555 -4.8 -3.3 potassium transporter Kup compare
RR42_RS04475 -4.6 -9.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
RR42_RS30660 -4.5 -9.7 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase compare
RR42_RS18295 -4.4 -12.3 anthranilate synthase component I compare
RR42_RS14385 -4.3 -7.5 3-isopropylmalate dehydrogenase compare
RR42_RS16245 -4.3 -7.1 uroporphyrin-III methyltransferase compare
RR42_RS16270 -4.1 -11.0 sulfite reductase compare
RR42_RS26900 -4.0 -3.6 enoyl-CoA hydratase compare
RR42_RS14320 -4.0 -5.9 O-succinylhomoserine sulfhydrylase compare
RR42_RS04535 -3.9 -6.5 cysteine synthase compare
RR42_RS12550 -3.6 -6.3 hypothetical protein compare
RR42_RS04460 -3.4 -7.2 chorismate mutase compare
RR42_RS19010 -3.3 -5.9 shikimate kinase compare
RR42_RS02500 -3.3 -3.8 TetR family transcriptional regulator compare
RR42_RS16280 -3.3 -6.5 transcriptional regulator compare
RR42_RS01845 -3.3 -2.1 glycerol-3-phosphate dehydrogenase compare
RR42_RS04470 -3.2 -4.7 prephenate dehydrogenase compare
RR42_RS18140 -3.0 -2.7 MarR family transcriptional regulator compare
RR42_RS14360 -3.0 -1.7 tryptophan synthase subunit alpha compare
RR42_RS17645 -3.0 -6.1 shikimate dehydrogenase compare
RR42_RS11795 -2.9 -4.8 PEP synthetase regulatory protein compare
RR42_RS20195 -2.9 -1.8 ATPase F0F1 compare
RR42_RS01290 -2.8 -5.6 thiamine biosynthesis protein ThiC compare
RR42_RS16240 -2.7 -1.5 cobalamin biosynthesis protein CbiX compare
RR42_RS33260 -2.6 -9.4 multidrug MFS transporter compare
RR42_RS33250 -2.5 -7.7 tyrosine protein kinase compare
RR42_RS01920 -2.3 -3.8 protoheme IX farnesyltransferase compare
RR42_RS18815 -2.3 -6.1 cytochrome C compare
RR42_RS12925 -2.2 -3.5 ATPase compare
RR42_RS20205 -2.1 -3.7 chromosome partitioning protein compare
RR42_RS17720 -2.0 -3.3 sugar kinase compare
RR42_RS24605 -2.0 -6.5 TetR family transcriptional regulator compare
RR42_RS02590 -2.0 -1.5 amino acid ABC transporter ATP-binding protein compare
RR42_RS07360 -1.9 -3.4 ATPase compare
RR42_RS25785 -1.9 -3.8 TetR family transcriptional regulator compare
RR42_RS12015 -1.9 -3.6 dihydrolipoamide acyltransferase compare
RR42_RS33255 -1.9 -2.7 protein-tyrosine phosphatase compare
RR42_RS18825 -1.9 -3.3 ubiquinol-cytochrome C reductase compare
RR42_RS29865 -1.9 -2.8 hypothetical protein compare
RR42_RS18850 -1.9 -2.2 preprotein translocase subunit TatC compare
RR42_RS15035 -1.8 -5.2 ZIP zinc transporter compare
RR42_RS18820 -1.8 -7.1 cytochrome B compare
RR42_RS21220 -1.8 -2.8 iron transporter FeoB compare
RR42_RS18930 -1.7 -5.1 BolA family transcriptional regulator compare
RR42_RS01720 -1.7 -3.2 membrane protein compare
RR42_RS33240 -1.7 -11.0 GDP-L-fucose synthase compare
RR42_RS18855 -1.7 -3.2 preprotein translocase compare
RR42_RS16260 -1.7 -1.0 phosphoadenosine phosphosulfate reductase compare
RR42_RS06095 -1.6 -4.1 hypothetical protein compare
RR42_RS19635 -1.6 -1.6 hypothetical protein compare
RR42_RS12040 -1.6 -8.0 MFS transporter compare
RR42_RS30640 -1.6 -5.9 DNA mismatch repair protein MutT compare
RR42_RS05990 -1.6 -7.0 aromatic amino acid aminotransferase compare
RR42_RS33245 -1.5 -7.1 mannose-1-phosphate guanyltransferase compare
RR42_RS07115 -1.5 -1.4 hypothetical protein compare
RR42_RS14055 -1.5 -3.1 elongation factor 4 compare
RR42_RS05955 -1.5 -1.5 hypothetical protein compare
RR42_RS33355 -1.4 -2.9 membrane protein compare
RR42_RS33650 -1.4 -3.4 IclR family transcriptional regulator compare
RR42_RS21820 -1.4 -4.7 GntR family transcriptional regulator compare
RR42_RS15015 -1.4 -1.3 exodeoxyribonuclease VII small subunit compare
RR42_RS14965 -1.4 -3.8 hypothetical protein compare
RR42_RS01915 -1.3 -4.1 cytochrome C oxidase subunit I compare
RR42_RS24040 -1.3 -4.3 hypothetical protein compare
RR42_RS01380 -1.3 -1.5 membrane protein compare
RR42_RS17050 -1.3 -5.4 phosphoribosylglycinamide formyltransferase compare
RR42_RS02775 -1.3 -2.7 molecular chaperone SurA compare
RR42_RS31530 -1.3 -1.8 histidine kinase compare
RR42_RS26905 -1.3 -6.2 methylcrotonoyl-CoA carboxylase compare
RR42_RS22490 -1.3 -5.2 IclR family transcriptional regulator compare
RR42_RS02150 -1.2 -2.2 membrane protein compare
RR42_RS00380 -1.2 -5.1 GntR family transcriptional regulator compare
RR42_RS34215 -1.2 -1.3 ferredoxin compare
RR42_RS34650 -1.2 -3.9 LacI family transcriptional regulator compare
RR42_RS24535 -1.2 -1.6 tRNA-Asn compare
RR42_RS07125 -1.2 -2.0 hypothetical protein compare
RR42_RS13365 -1.2 -1.9 peptidase P60 compare
RR42_RS04895 -1.1 -7.2 serine/threonine protein phosphatase compare
RR42_RS02575 -1.1 -6.0 ABC transporter compare
RR42_RS33235 -1.1 -5.7 GDP-mannose 4,6-dehydratase compare
RR42_RS03080 -1.1 -3.1 recombinase RecA compare
RR42_RS21665 -1.1 -4.7 cobalt transporter compare
RR42_RS07180 -1.1 -2.8 hypothetical protein compare
RR42_RS25200 -1.1 -3.5 TetR family transcriptional regulator compare
RR42_RS02250 -1.1 -1.7 GntR family transcriptional regulator compare
RR42_RS01875 -1.1 -5.3 cytochrome C oxidase subunit II compare
RR42_RS07225 -1.1 -1.4 hypothetical protein compare
RR42_RS36450 -1.1 -1.4 acyl dehydratase compare
RR42_RS26580 -1.1 -1.6 hypothetical protein compare
RR42_RS02585 -1.0 -6.5 amino acid ABC transporter permease compare
RR42_RS31285 -1.0 -1.7 XRE family transcriptional regulator compare
RR42_RS08000 -1.0 -1.2 hypothetical protein compare
RR42_RS02045 -1.0 -6.3 GTPase compare
RR42_RS21435 -1.0 -3.1 hypothetical protein compare
RR42_RS26935 -1.0 -2.6 farnesyl-diphosphate farnesyltransferase compare
RR42_RS04300 -1.0 -3.0 nitrogen regulatory protein P-II 1 compare
RR42_RS33145 -1.0 -1.7 hypothetical protein compare
RR42_RS02730 -1.0 -2.4 tRNA-dihydrouridine synthase B compare
RR42_RS08945 -1.0 -1.3 hypothetical protein compare
RR42_RS26590 -1.0 -1.6 hypothetical protein compare
RR42_RS02580 -1.0 -5.0 amino acid ABC transporter permease compare
RR42_RS18120 -1.0 -1.7 cell division protein MraZ compare
RR42_RS34585 -1.0 -1.5 LysR family transcriptional regulator compare
RR42_RS27700 -1.0 -1.1 hypothetical protein compare
RR42_RS00660 -1.0 -5.1 permease compare
RR42_RS13880 -1.0 -7.1 AMP-dependent synthetase compare
RR42_RS01885 -1.0 -3.8 cytochrome C oxidase assembly protein compare
RR42_RS18310 -1.0 -0.7 indole-3-glycerol-phosphate synthase compare
RR42_RS02705 -1.0 -1.9 Holliday junction DNA helicase RuvA compare
RR42_RS33575 -1.0 -1.7 hypothetical protein compare
RR42_RS36400 -1.0 -1.1 hypothetical protein compare
RR42_RS11220 -1.0 -3.3 peptide ABC transporter compare
RR42_RS22495 -1.0 -3.4 hypothetical protein compare
RR42_RS01905 -0.9 -2.8 cytochrome C oxidase subunit II compare
RR42_RS16525 -0.9 -1.9 anti-sigma factor compare
RR42_RS07620 -0.9 -3.1 polyhydroxyalkanoate synthesis repressor PhaR compare
RR42_RS24235 -0.9 -2.1 hypothetical protein compare
RR42_RS13040 -0.9 -3.0 iron transporter compare
RR42_RS16405 -0.9 -3.3 hypothetical protein compare
RR42_RS15000 -0.9 -2.2 GTP cyclohydrolase compare
RR42_RS34255 -0.9 -4.3 aldehyde dehydrogenase compare
RR42_RS21790 -0.9 -1.9 short-chain dehydrogenase compare
RR42_RS26985 -0.9 -0.9 hypothetical protein compare
RR42_RS07605 -0.9 -3.8 poly-beta-hydroxybutyrate polymerase compare
RR42_RS12590 -0.9 -0.9 50S ribosomal protein L9 compare
RR42_RS35110 -0.9 -1.6 hypothetical protein compare
RR42_RS13180 -0.9 -5.3 3'-5' exonuclease compare
RR42_RS02860 -0.9 -1.8 hypothetical protein compare
RR42_RS19090 -0.9 -1.3 cytochrome C compare
RR42_RS17060 -0.9 -6.5 histidine kinase compare
RR42_RS01910 -0.9 -3.1 cytochrome C oxidase subunit I compare
RR42_RS23730 -0.9 -2.8 phenylacetate-CoA oxygenase subunit PaaB compare
RR42_RS33210 -0.9 -2.4 teichoic acid biosynthesis protein compare
RR42_RS27045 -0.8 -1.5 hypothetical protein compare
RR42_RS18670 -0.8 -2.8 metal-dependent hydrolase compare
RR42_RS01880 -0.8 -3.2 cytochrome oxidase subunit I compare
RR42_RS03925 -0.8 -2.1 hypothetical protein compare
RR42_RS08425 -0.8 -1.2 hypothetical protein compare
RR42_RS23355 -0.8 -1.5 flagellar biosynthetic protein FliQ compare
RR42_RS26920 -0.8 -2.5 TetR family transcriptional regulator compare
RR42_RS31710 -0.8 -5.1 HxlR family transcriptional regulator compare
RR42_RS10240 -0.8 -2.2 hypothetical protein compare
RR42_RS05610 -0.8 -2.9 dehydratase compare
RR42_RS13800 -0.8 -4.1 formyltetrahydrofolate deformylase compare
RR42_RS25765 -0.8 -2.8 hypothetical protein compare
RR42_RS11770 -0.8 -1.4 cyclase compare
RR42_RS03095 -0.8 -1.4 succinyl-CoA synthetase subunit beta compare
RR42_RS06395 -0.8 -3.1 TetR family transcriptional regulator compare
RR42_RS01820 -0.8 -2.9 peptidase S41 compare
RR42_RS12315 -0.8 -1.5 transcriptional regulator compare
RR42_RS22090 -0.8 -2.6 hypothetical protein compare
RR42_RS19945 -0.8 -2.2 AraC family transcriptional regulator compare
RR42_RS21360 -0.8 -1.6 ABC transporter permease compare
RR42_RS00715 -0.8 -1.5 ferritin compare
RR42_RS33540 -0.8 -2.4 adenylylsulfate kinase compare
RR42_RS23550 -0.8 -2.3 flagellar export protein FliJ compare
RR42_RS15740 -0.8 -1.4 hypothetical protein compare
RR42_RS32785 -0.8 -1.8 chemotaxis protein compare
RR42_RS10515 -0.8 -1.9 fumarylacetoacetate hydrolase compare
RR42_RS08085 -0.8 -2.3 hypothetical protein compare
RR42_RS19695 -0.8 -1.6 cytochrome C protein compare
RR42_RS16950 -0.8 -2.6 CDP-6-deoxy-delta-3,4-glucoseen reductase compare
RR42_RS13190 -0.8 -2.0 outer membrane metallopeptidase lipoprotein nlpD compare
RR42_RS32740 -0.8 -0.8 enoyl-CoA hydratase compare
RR42_RS04890 -0.8 -1.7 ribonuclease PH compare
RR42_RS27995 -0.8 -2.3 RelE toxin compare
RR42_RS30940 -0.7 -2.8 cobalt-zinc-cadmium resistance protein compare
RR42_RS15785 -0.7 -4.8 glycosyl transferase family 28 compare
RR42_RS17880 -0.7 -0.8 hypothetical protein compare
RR42_RS19410 -0.7 -3.4 GntR family transcriptional regulator compare
RR42_RS20775 -0.7 -0.8 hypothetical protein compare
RR42_RS37240 -0.7 -0.8 hypothetical protein compare
RR42_RS19065 -0.7 -4.6 transcriptional regulator compare
RR42_RS00790 -0.7 -4.1 chemotaxis protein CheY compare
RR42_RS00940 -0.7 -3.4 biotin synthase compare
RR42_RS23685 -0.7 -4.1 transcriptional regulator compare
RR42_RS33900 -0.7 -2.2 membrane protein compare
RR42_RS34980 -0.7 -1.5 oxidoreductase compare
RR42_RS00600 -0.7 -1.3 DeoR family transcriptional regulator compare
RR42_RS26895 -0.7 -3.3 3-methylcrotonyl-CoA carboxylase compare
RR42_RS22760 -0.7 -3.2 GntR family transcriptional regulator compare
RR42_RS00285 -0.7 -1.6 thiamine biosynthesis protein ThiS compare
RR42_RS19885 -0.7 -0.6 aminoglycoside transporter compare
RR42_RS17390 -0.7 -2.7 ATP-dependent DNA helicase RecG compare
RR42_RS11225 -0.7 -1.1 peptide ABC transporter permease compare


Specific Phenotypes

None in this experiment

For Cupriavidus basilensis FW507-4G11 in carbon source experiments

For carbon source L-Glutamine across organisms