| | gene | name | fitness | t score | description | |
|---|
| b3792 | wzxE | -3.2 | -6.1 | O-antigen translocase (NCBI) | compare |
| b0145 | dksA | -3.2 | -3.1 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b0142 | folK | -3.1 | -1.9 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b1085 | b1085 | -3.0 | -2.5 | orf, hypothetical protein (VIMSS) | compare |
| b2808 | gcvA | -2.9 | -4.7 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2938 | speA | -2.7 | -10.3 | arginine decarboxylase (NCBI) | compare |
| b0630 | lipB | -2.5 | -2.3 | protein of lipoate biosynthesis (VIMSS) | compare |
| b2784 | relA | -2.5 | -8.6 | (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) | compare |
| b0082 | mraW | -2.5 | -4.0 | S-adenosyl-methyltransferase (NCBI) | compare |
| b2937 | speB | -2.4 | -7.0 | agmatinase (NCBI) | compare |
| b2567 | rnc | -2.4 | -2.2 | ribonuclease III (NCBI) | compare |
| b1861 | ruvA | -2.4 | -3.0 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b1984 | asnW | -2.4 | -2.0 | tRNA-Asn (NCBI) | compare |
| b3341 | rpsG | -2.3 | -1.5 | 30S ribosomal protein S7 (NCBI) | compare |
| b2911 | ssrS | -2.3 | -1.5 | 6S regulatory RNA (NCBI) | compare |
| b0386 | proC | -2.3 | -6.4 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b3778 | rep | -2.3 | -7.9 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b2330 | yfcB | -2.2 | -2.9 | putative adenine-specific methylase (VIMSS) | compare |
| b2830 | nudH | -2.2 | -2.0 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b3741 | gidA | -2.0 | -6.3 | glucose-inhibited division protein A (NCBI) | compare |
| b3183 | obgE | -2.0 | -1.9 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b2820 | recB | -2.0 | -1.4 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b1286 | rnb | -2.0 | -3.8 | exoribonuclease II (NCBI) | compare |
| b0059 | hepA | -2.0 | -12.6 | ATP-dependent helicase HepA (NCBI) | compare |
| b2829 | ptsP | -2.0 | -10.9 | fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein (NCBI) | compare |
| b3871 | bipA | -1.9 | -9.1 | GTP-binding protein (NCBI) | compare |
| b3706 | trmE | -1.8 | -5.0 | tRNA modification GTPase (NCBI) | compare |
| b3609 | secB | -1.8 | -4.2 | export protein SecB (NCBI) | compare |
| b4171 | miaA | -1.8 | -5.1 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b1576 | ydfD | -1.8 | -3.1 | Qin prophage; predicted protein (NCBI) | compare |
| b3781 | trxA | -1.8 | -3.7 | thioredoxin 1 (VIMSS) | compare |
| b0739 | tolA | -1.8 | -4.3 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b2894 | xerD | -1.7 | -1.6 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b2912 | ygfA | -1.7 | -2.7 | putative ligase (VIMSS) | compare |
| b4239 | treC | -1.7 | -4.3 | trehalose-6-P hydrolase (NCBI) | compare |
| b3472 | b3472 | -1.7 | -6.7 | orf, hypothetical protein (VIMSS) | compare |
| b1865 | nudB | -1.7 | -1.4 | dATP pyrophosphohydrolase (NCBI) | compare |
| b2904 | gcvH | -1.6 | -2.1 | glycine cleavage system protein H (NCBI) | compare |
| b3387 | dam | -1.6 | -9.2 | DNA adenine methylase (NCBI) | compare |
| b0849 | grxA | -1.6 | -2.3 | glutaredoxin 1, redox coenzyme for ribonucleotide reductase (RNR1a) (NCBI) | compare |
| b1613 | manA | -1.6 | -2.6 | mannose-6-phosphate isomerase (VIMSS) | compare |
| b3811 | xerC | -1.6 | -1.1 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b1804 | rnd | -1.6 | -3.2 | ribonuclease D (NCBI) | compare |
| b0890 | ftsK | -1.5 | -6.2 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b2236 | yfaE | -1.5 | -2.8 | predicted 2Fe-2S cluster-containing protein (NCBI) | compare |
| b3181 | greA | -1.5 | -3.8 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b2903 | gcvP | -1.5 | -8.2 | glycine dehydrogenase (NCBI) | compare |
| b0767 | ybhE | -1.5 | -3.7 | 6-phosphogluconolactonase (NCBI) | compare |
| b2699 | recA | -1.5 | -1.9 | recombinase A (NCBI) | compare |
| b1192 | ldcA | -1.5 | -4.2 | L,D-carboxypeptidase A (NCBI) | compare |
| b4177 | purA | -1.5 | -2.0 | adenylosuccinate synthetase (NCBI) | compare |
| b2175 | spr | -1.5 | -3.4 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b0149 | mrcB | -1.5 | -9.0 | penicillin-binding protein 1b (NCBI) | compare |
| b3206 | npr | -1.5 | -4.2 | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) (NCBI) | compare |
| b2935 | tktA | -1.5 | -2.1 | transketolase 1, thiamin-binding (NCBI) | compare |
| b0741 | pal | -1.5 | -4.1 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b2905 | gcvT | -1.5 | -4.9 | glycine cleavage system aminomethyltransferase T (NCBI) | compare |
| b1150 | ymfR | -1.5 | -1.4 | e14 prophage; predicted protein (NCBI) | compare |
| b3033 | yqiB | -1.4 | -3.5 | predicted dehydrogenase (NCBI) | compare |
| b1831 | proQ | -1.4 | -3.8 | putative solute/DNA competence effector (NCBI) | compare |
| b0726 | sucA | -1.4 | -3.0 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b1551 | b1551 | -1.4 | -2.4 | orf, hypothetical protein (VIMSS) | compare |
| b3806 | cyaA | -1.4 | -4.6 | adenylate cyclase (NCBI) | compare |
| b1685 | ydiH | -1.4 | -1.6 | predicted protein (RefSeq) | compare |
| b1942 | fliJ | -1.4 | -1.5 | flagellar biosynthesis chaperone (NCBI) | compare |
| b2287 | nuoB | -1.3 | -3.3 | NADH dehydrogenase subunit B (NCBI) | compare |
| b3493 | pitA | -1.3 | -6.2 | phosphate transporter, low-affinity (NCBI) | compare |
| b1279 | yciS | -1.3 | -1.6 | conserved inner membrane protein (NCBI) | compare |
| b1863 | ruvC | -1.3 | -3.1 | Holliday junction resolvase (NCBI) | compare |
| b0957 | ompA | -1.3 | -3.5 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b2576 | srmB | -1.3 | -3.0 | ATP-dependent RNA helicase (NCBI) | compare |
| b4655 | ythA | -1.3 | -1.1 | expressed protein (RefSeq) | compare |
| b4515 | ybgT | -1.2 | -1.6 | hypothetical protein (NCBI) | compare |
| b2285 | nuoE | -1.2 | -2.0 | NADH dehydrogenase subunit E (NCBI) | compare |
| b0738 | tolR | -1.2 | -2.9 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0580 | ybdJ | -1.2 | -1.5 | predicted inner membrane protein (NCBI) | compare |
| b0737 | tolQ | -1.2 | -2.5 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b2642 | yfjW | -1.2 | -2.5 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b4000 | hupA | -1.2 | -3.4 | HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) | compare |
| b3261 | fis | -1.2 | -2.6 | DNA-binding protein Fis (NCBI) | compare |
| b3791 | rffA | -1.1 | -5.1 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b3613 | yibP | -1.1 | -4.0 | putative membrane protein (VIMSS) | compare |
| b2055 | wcaE | -1.1 | -1.8 | predicted glycosyl transferase (NCBI) | compare |
| b4451 | ryhB | -1.1 | -1.1 | Regulatory sRNA mediating positive Fur regulon response; requires Hfq for function; global iron regulator; degraded by RNase E when bound to target (RefSeq) | compare |
| b2822 | recC | -1.1 | -3.4 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b1358 | ydaT | -1.1 | -1.3 | Rac prophage; predicted protein (NCBI) | compare |
| b1058 | yceO | -1.1 | -1.2 | hypothetical protein (NCBI) | compare |
| b2659 | b2659 | -1.0 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b0118 | acnB | -1.0 | -2.4 | aconitate hydratase (NCBI) | compare |
| b2297 | pta | -1.0 | -1.4 | phosphate acetyltransferase (NCBI) | compare |
| b2288 | nuoA | -1.0 | -2.4 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b4529 | ydbJ | -1.0 | -1.1 | hypothetical protein (NCBI) | compare |
| b3784 | rfe | -1.0 | -6.8 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b3121 | yhaC | -1.0 | -1.8 | hypothetical protein (NCBI) | compare |
| b0127 | yadG | -1.0 | -3.4 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b4201 | priB | -1.0 | -1.4 | primosomal replication protein N (NCBI) | compare |
| b0028 | fkpB | -1.0 | -3.5 | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) (NCBI) | compare |
| b4503 | yafF | -1.0 | -1.1 | no description | compare |
| b4505 | insX | -0.9 | -1.2 | predicted IS protein (RefSeq) | compare |
| b1147 | ymfL | -0.9 | -2.2 | e14 prophage; predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b4613 | dinQ | -0.9 | -1.2 | Damage inducible, function unknown (RefSeq) | compare |
| b4558 | yifL | -0.9 | -2.8 | predicted lipoprotein (NCBI) | compare |
| b4647 | mokA | -0.9 | -1.2 | no description | compare |
| b1530 | marR | -0.9 | -2.8 | multiple antibiotic resistance protein; repressor of mar operon (VIMSS) | compare |
| b1730 | ydjO | -0.9 | -2.3 | predicted protein (RefSeq) | compare |
| b1259 | yciG | -0.9 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b0053 | surA | -0.9 | -3.0 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b4375 | prfC | -0.9 | -4.0 | peptide chain release factor 3 (NCBI) | compare |
| b3290 | trkA | -0.9 | -2.4 | potassium transporter peripheral membrane component (NCBI) | compare |
| b3199 | yrbK | -0.9 | -1.8 | hypothetical protein (NCBI) | compare |
| b2282 | nuoH | -0.9 | -2.1 | NADH dehydrogenase subunit H (NCBI) | compare |
| b1853 | yebK | -0.9 | -1.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4172 | hfq | -0.9 | -1.4 | RNA-binding protein Hfq (NCBI) | compare |
| b1850 | eda | -0.9 | -1.6 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b0705 | ybfL | -0.9 | -2.0 | putative receptor protein (VIMSS) | compare |
| b3935 | priA | -0.9 | -1.9 | primosome assembly protein PriA (NCBI) | compare |
| b2625 | yfjI | -0.9 | -3.7 | CP4-57 prophage; predicted protein (NCBI) | compare |
| b3790 | rffC | -0.9 | -3.1 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b2569 | lepA | -0.9 | -2.6 | GTP-binding protein LepA (NCBI) | compare |
| b3725 | pstB | -0.9 | -1.7 | phosphate transporter subunit (NCBI) | compare |
| b1086 | rluC | -0.9 | -3.4 | 23S rRNA pseudouridylate synthase (NCBI) | compare |
| b3131 | agaR | -0.9 | -2.5 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1179 | ycgL | -0.8 | -1.7 | conserved protein (NCBI) | compare |
| b3160 | yhbW | -0.8 | -4.4 | predicted enzyme (NCBI) | compare |
| b3120 | yhaB | -0.8 | -2.2 | orf, hypothetical protein (VIMSS) | compare |
| b0125 | hpt | -0.8 | -2.8 | hypoxanthine phosphoribosyltransferase (VIMSS) | compare |
| b2318 | truA | -0.8 | -2.4 | tRNA pseudouridine synthase A (NCBI) | compare |
| b3961 | oxyR | -0.8 | -5.0 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0889 | lrp | -0.8 | -1.7 | DNA-binding transcriptional dual regulator, leucine-binding (NCBI) | compare |
| b3035 | tolC | -0.8 | -4.2 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b2393 | nupC | -0.8 | -3.3 | nucleoside (except guanosine) transporter (NCBI) | compare |
| b1361 | ydaW | -0.8 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b4685 | yrbN | -0.8 | -1.5 | expressed protein (RefSeq) | compare |
| b4426 | isrA | -0.8 | -1.8 | unknown RNA (NCBI) | compare |
| b0436 | tig | -0.8 | -4.2 | trigger factor (NCBI) | compare |
| b2014 | yeeF | -0.8 | -4.4 | putative amino acid/amine transport protein (VIMSS) | compare |
| b1726 | yniB | -0.8 | -1.6 | predicted inner membrane protein (NCBI) | compare |
| b1591 | b1591 | -0.8 | -1.3 | putative oxidoreductase component (VIMSS) | compare |
| b3405 | ompR | -0.8 | -2.7 | osmolarity response regulator (NCBI) | compare |
| b4227 | ytfQ | -0.8 | -2.5 | predicted sugar transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) | compare |
| b3163 | nlpI | -0.8 | -2.6 | hypothetical protein (NCBI) | compare |
| b2617 | smpA | -0.8 | -1.9 | small membrane protein A (VIMSS) | compare |
| b3463 | ftsE | -0.8 | -2.5 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b3414 | gntY | -0.8 | -3.2 | predicted gluconate transport associated protein (NCBI) | compare |
| b2276 | nuoN | -0.8 | -2.8 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b3026 | qseC | -0.8 | -2.6 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b4481 | rffT | -0.8 | -3.3 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b1480 | sra | -0.8 | -1.6 | 30S ribosomal subunit protein S22 (NCBI) | compare |
| b0471 | ybaB | -0.8 | -2.0 | hypothetical protein (NCBI) | compare |
| b3184 | yhbE | -0.8 | -4.0 | conserved inner membrane protein (NCBI) | compare |
| b1273 | yciN | -0.7 | -1.3 | hypothetical protein (NCBI) | compare |
| b4146 | yjeK | -0.7 | -1.8 | predicted lysine aminomutase (NCBI) | compare |
| b1363 | trkG | -0.7 | -2.9 | Rac prophage; potassium transporter subunit (NCBI) | compare |
| b1926 | fliT | -0.7 | -1.9 | predicted chaperone (NCBI) | compare |
| b1304 | pspA | -0.7 | -2.4 | regulatory protein for phage-shock-protein operon (NCBI) | compare |
| b3029 | ygiN | -0.7 | -1.6 | quinol monooxygenase (NCBI) | compare |
| b4443 | gcvB | -0.7 | -0.7 | GcvB sRNA gene divergent from gcvA (RefSeq) | compare |
| b2038 | rfbC | -0.7 | -3.9 | dTDP-4-deoxyrhamnose-3,5-epimerase (NCBI) | compare |
| b2277 | nuoM | -0.7 | -3.1 | NADH dehydrogenase subunit M (NCBI) | compare |
| b2352 | yfdI | -0.7 | -2.4 | CPS-53 (KpLE1) prophage; predicted inner membrane protein (NCBI) | compare |
| b0219 | yafV | -0.7 | -1.7 | predicted C-N hydrolase family amidase, NAD(P)-binding (NCBI) | compare |
| b1257 | yciE | -0.7 | -1.6 | hypothetical protein (NCBI) | compare |
| b1129 | phoQ | -0.7 | -3.6 | sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) | compare |
| b0406 | tgt | -0.7 | -3.3 | queuine tRNA-ribosyltransferase (NCBI) | compare |
| b3652 | recG | -0.7 | -4.1 | ATP-dependent DNA helicase (NCBI) | compare |
| b3443 | yrhA | -0.7 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b1724 | ydiZ | -0.7 | -1.2 | hypothetical protein (NCBI) | compare |
| b0407 | yajC | -0.7 | -1.7 | preprotein translocase subunit YajC (NCBI) | compare |
| b3740 | gidB | -0.7 | -4.3 | glucose-inhibited division protein B (NCBI) | compare |
| b2532 | yfhQ | -0.7 | -2.0 | predicted methyltransferase (NCBI) | compare |
| b1238 | tdk | -0.7 | -3.5 | thymidine kinase (NCBI) | compare |
| b2279 | nuoK | -0.7 | -1.2 | NADH dehydrogenase subunit K (NCBI) | compare |
| b1642 | slyA | -0.7 | -1.1 | transcriptional regulator for cryptic hemolysin (VIMSS) | compare |
| b0487 | cueR | -0.7 | -1.9 | DNA-binding transcriptional activator of copper-responsive regulon genes (NCBI) | compare |
| b0603 | ybdO | -0.7 | -1.6 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2513 | yfgM | -0.7 | -2.8 | hypothetical protein (NCBI) | compare |
| b4240 | treB | -0.7 | -4.2 | fused trehalose(maltose)-specific PTS enzyme: IIB component/IIC component (NCBI) | compare |
| b1954 | dsrA | -0.7 | -1.1 | regulatory antisense RNA (NCBI) | compare |
| b1849 | purT | -0.7 | -2.3 | phosphoribosylglycinamide formyltransferase 2 (NCBI) | compare |
| b2278 | nuoL | -0.7 | -3.8 | NADH dehydrogenase subunit L (NCBI) | compare |
| b3870 | glnA | -0.6 | -1.4 | glutamine synthetase (NCBI) | compare |
| b1484 | ddpD | -0.6 | -2.8 | D-ala-D-ala transporter subunit (NCBI) | compare |
| b2195 | ccmG | -0.6 | -1.3 | periplasmic thioredoxin of cytochrome c-type biogenesis (NCBI) | compare |
| b1088 | yceD | -0.6 | -1.9 | hypothetical protein (NCBI) | compare |
| b2531 | iscR | -0.6 | -1.0 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1307 | pspD | -0.6 | -1.1 | peripheral inner membrane phage-shock protein (NCBI) | compare |
| b2209 | eco | -0.6 | -1.4 | ecotin precursor (NCBI) | compare |
| b3462 | ftsX | -0.6 | -2.5 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b0326 | yahL | -0.6 | -3.6 | hypothetical protein (NCBI) | compare |
| b1383 | ydbL | -0.6 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b2343 | b2343 | -0.6 | -0.9 | orf, hypothetical protein (VIMSS) | compare |
| b1603 | pntA | -0.6 | -1.6 | NAD(P) transhydrogenase subunit alpha (NCBI) | compare |
| b3146 | yraL | -0.6 | -2.9 | predicted methyltransferase (NCBI) | compare |
| b2021 | hisC | -0.6 | -2.1 | histidinol-phosphate aminotransferase (NCBI) | compare |
| b1497 | b1497 | -0.6 | -1.9 | putative enzyme (VIMSS) | compare |
| b1731 | cedA | -0.6 | -1.4 | cell division modulator (RefSeq) | compare |
| b2847 | yqeI | -0.6 | -3.1 | predicted transcriptional regulator (NCBI) | compare |
| b1919 | yedO | -0.6 | -1.7 | putative 1-aminocyclopropane-1-carboxylate deaminase (VIMSS) | compare |
| b3916 | pfkA | -0.6 | -1.6 | 6-phosphofructokinase (NCBI) | compare |
| b2951 | yggS | -0.6 | -1.6 | predicted enzyme (NCBI) | compare |