Experiment set2H31 for Dechlorosoma suillum PS

Compare to:

Anaerobic growth with lactate carbon source, nitrate electron acceptor

200 most detrimental genes:

  gene name fitness t score description  
Dsui_2077 +1.5 7.8 cAMP-binding protein compare
Dsui_0042 +1.3 3.2 Protein of unknown function (DUF2892) compare
Dsui_2873 +0.9 1.7 Peroxiredoxin compare
Dsui_2265 +0.9 2.2 DNA-directed DNA polymerase III PolC compare
Dsui_2607 +0.8 2.8 hypothetical protein compare
Dsui_2076 +0.8 3.0 cytochrome c, mono- and diheme variants family compare
Dsui_2971 +0.8 2.7 putative esterase of the alpha-beta hydrolase superfamily compare
Dsui_3194 +0.7 3.5 pseudouridylate synthase I compare
Dsui_1664 +0.7 2.6 putative periplasmic protein compare
Dsui_1869 +0.7 2.5 hypothetical protein compare
Dsui_3171 +0.6 1.1 putative protein-disulfide isomerase compare
Dsui_3151 +0.6 1.8 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_3228 +0.6 2.0 transcriptional regulator compare
Dsui_1012 +0.6 2.3 ABC-type branched-chain amino acid transport system, periplasmic component compare
Dsui_3295 +0.6 2.5 isocitrate dehydrogenase, NADP-dependent, monomeric type compare
Dsui_2395 +0.6 2.7 hypothetical protein compare
Dsui_3154 +0.6 3.5 TRAP-type C4-dicarboxylate transport system, small permease component compare
Dsui_2248 +0.6 1.4 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_3440 +0.5 1.5 Protein of unknown function (DUF2892) compare
Dsui_2733 +0.5 1.7 bacterioferritin compare
Dsui_0676 +0.5 1.4 short-chain dehydrogenase of unknown substrate specificity compare
Dsui_1005 +0.5 1.7 tRNA-Gly compare
Dsui_2540 +0.5 1.5 ribosomal protein S12 methylthiotransferase RimO compare
Dsui_0015 +0.5 1.1 putative signal-transduction protein containing cAMP-binding and CBS domains compare
Dsui_0131 +0.5 4.5 phosphoenolpyruvate carboxykinase (GTP) compare
Dsui_2921 +0.5 1.3 isochorismate synthase family protein compare
Dsui_3105 +0.5 3.3 CBS domain-containing protein compare
Dsui_1591 +0.5 1.2 Xaa-Pro aminopeptidase compare
Dsui_3458 +0.5 1.5 septum site-determining protein MinC compare
Dsui_0414 +0.5 1.9 oligopeptide/dipeptide ABC transporter, ATP-binding protein compare
Dsui_1442 +0.5 1.3 putative efflux protein, MATE family compare
Dsui_2188 +0.5 2.2 Protein of unknown function (DUF3460) compare
Dsui_1263 +0.5 3.8 TRAP-type mannitol/chloroaromatic compound transport system, small permease component compare
Dsui_0591 +0.5 2.6 deoxyribodipyrimidine photolyase compare
Dsui_0289 +0.5 1.9 putative membrane protein compare
Dsui_2927 +0.5 1.1 cell wall-associated hydrolase, invasion-associated protein compare
Dsui_0327 +0.5 2.1 transcriptional regulator compare
Dsui_2315 +0.5 2.0 Stress responsive A/B Barrel Domain-containing protein compare
Dsui_0282 +0.5 2.0 hypothetical protein compare
Dsui_2369 +0.5 2.0 iron-sulfur cluster assembly transcription factor IscR compare
Dsui_0184 +0.5 0.9 putative transcriptional regulator compare
Dsui_3330 +0.5 1.0 hypothetical protein compare
Dsui_0638 +0.5 3.3 ABC-type polar amino acid transport system, ATPase component compare
Dsui_0583 +0.4 1.4 ABC-type Mn2+/Zn2+ transport system, permease component compare
Dsui_2600 +0.4 1.8 hypothetical protein compare
Dsui_0571 +0.4 2.3 ferredoxin compare
Dsui_3389 +0.4 2.0 enoyl-CoA hydratase/carnithine racemase compare
Dsui_1233 +0.4 3.0 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component compare
Dsui_3291 +0.4 1.2 hypothetical protein compare
Dsui_1645 +0.4 1.5 hemerythrin HHE cation binding domain-containing protein compare
Dsui_3332 +0.4 1.9 glutathione S-transferase compare
Dsui_0946 +0.4 1.3 putative nitrogen fixation protein FixT compare
Dsui_3288 +0.4 2.5 anti-anti-sigma factor compare
Dsui_1300 +0.4 2.9 sulfite oxidase-like oxidoreductase compare
Dsui_1997 +0.4 1.4 Peroxiredoxin compare
Dsui_0306 +0.4 0.8 putative permease compare
Dsui_3213 +0.4 1.7 CBS domain-containing protein compare
Dsui_1505 +0.4 1.9 phage-related lysozyme (muraminidase) compare
Dsui_0994 +0.4 1.8 peptidase S16, lon domain protein compare
Dsui_1588 +0.4 3.0 aminoglycoside phosphotransferase compare
Dsui_2359 +0.4 1.0 hypothetical protein compare
Dsui_3023 +0.4 2.9 phosphate/sulfate permease compare
Dsui_0552 +0.4 1.1 nitrogen fixation protein NifX compare
Dsui_0395 +0.4 0.8 outer membrane lipoprotein compare
Dsui_0648 +0.4 1.9 acetyltransferase compare
Dsui_0536 +0.4 2.0 hemerythrin-like metal-binding domain-containing protein compare
Dsui_0391 +0.4 0.5 Protein of unknown function (DUF3426) compare
Dsui_3518 +0.4 2.3 putative membrane protein compare
Dsui_2881 +0.4 2.4 8-amino-7-oxononanoate synthase compare
Dsui_2903 +0.4 1.9 methyltransferase family protein compare
Dsui_0435 +0.4 0.9 Sel1 repeat protein compare
Dsui_2164 +0.4 1.1 signal transduction histidine kinase compare
Dsui_0990 +0.4 0.4 putative P-loop-containing kinase compare
Dsui_2778 +0.4 2.0 isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase compare
Dsui_2276 +0.4 1.5 Protein of unknown function (DUF2975) compare
Dsui_2653 +0.4 2.3 Tfp pilus assembly protein PilZ compare
Dsui_3206 +0.4 1.1 putative metal-binding protein compare
Dsui_2889 +0.4 1.7 parvulin-like peptidyl-prolyl isomerase compare
Dsui_1700 +0.4 1.6 putative membrane protein compare
Dsui_0699 +0.4 2.3 hypothetical protein compare
Dsui_2809 +0.4 0.9 ABC-type uncharacterized transport system, auxiliary component compare
Dsui_0942 +0.4 1.6 hypothetical protein compare
Dsui_1351 +0.4 1.8 DNA/RNA helicase, superfamily II compare
Dsui_1661 +0.4 1.2 hypothetical protein compare
Dsui_3469 +0.4 1.2 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Dsui_2149 +0.4 2.3 DNA helicase, Rad3 compare
Dsui_2543 +0.4 1.0 hypothetical protein compare
Dsui_0689 +0.4 1.4 lysophospholipase compare
Dsui_0616 +0.4 1.6 ABC-type antimicrobial peptide transport system, ATPase component compare
Dsui_2820 +0.4 1.9 putative hydrolase or acyltransferase of alpha/beta superfamily compare
Dsui_2407 +0.4 0.6 beta-propeller domain-containing protein, methanol dehydrogenase compare
Dsui_1295 +0.4 3.0 lipid A core-O-antigen ligase-like enyme compare
Dsui_0938 +0.4 1.9 HD-GYP domain-containing protein compare
Dsui_3007 +0.4 0.9 hydrogenase assembly chaperone HypC/HupF compare
Dsui_1438 +0.4 1.8 putative NTP binding protein (contains STAS domain) compare
Dsui_2393 +0.4 1.7 uncharacterized domain HDIG-containing protein compare
Dsui_2678 +0.4 2.3 hypothetical protein compare
Dsui_2617 +0.4 0.8 DNA recombination-dependent growth factor C compare
Dsui_2883 +0.4 1.0 biotin biosynthesis protein BioC compare
Dsui_2759 +0.4 1.2 pseudouridine synthase family protein compare
Dsui_2956 +0.4 0.8 ABC-type cobalt transport system, periplasmic component compare
Dsui_2676 +0.4 1.5 putative membrane protein compare
Dsui_2143 +0.4 1.1 hypothetical protein compare
Dsui_1829 +0.4 1.6 hemerythrin HHE cation binding domain-containing protein compare
Dsui_2220 +0.4 0.8 hypothetical protein compare
Dsui_3071 +0.4 1.7 SprA-related family compare
Dsui_1556 +0.3 1.9 RND family efflux transporter, MFP subunit compare
Dsui_1613 +0.3 2.5 cytochrome c553 compare
Dsui_0978 +0.3 1.2 2-hydroxychromene-2-carboxylate isomerase compare
Dsui_0637 +0.3 2.8 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family compare
Dsui_1187 +0.3 3.0 type IV pilus assembly protein PilM compare
Dsui_0690 +0.3 1.5 hypothetical protein compare
Dsui_2234 +0.3 1.1 hypothetical protein compare
Dsui_2329 +0.3 0.7 putative dehydrogenase compare
Dsui_1923 +0.3 2.6 ribonucleotide reductase, beta subunit compare
Dsui_0442 +0.3 2.3 monofunctional biosynthetic peptidoglycan transglycosylase compare
Dsui_0949 +0.3 0.8 hypothetical protein compare
Dsui_2327 +0.3 1.7 putative toxin-antitoxin system toxin component, PIN family compare
Dsui_0979 +0.3 1.6 TIGR00730 family protein compare
Dsui_2876 +0.3 2.0 RND family efflux transporter, MFP subunit compare
Dsui_1444 +0.3 2.8 Protein of unknown function (DUF2889) compare
Dsui_1520 +0.3 1.2 cytochrome c551/c552 compare
Dsui_1521 +0.3 1.6 hypothetical protein compare
Dsui_1255 +0.3 2.2 mannose-6-phosphate isomerase compare
Dsui_2316 +0.3 0.9 hypothetical protein compare
Dsui_3376 +0.3 1.8 aspartate/tyrosine/aromatic aminotransferase compare
Dsui_0872 +0.3 2.2 exodeoxyribonuclease III compare
Dsui_2602 +0.3 2.6 Protein of unknown function (DUF3577) compare
Dsui_1004 +0.3 0.4 conserved protein of DIM6/NTAB family compare
Dsui_0324 +0.3 1.9 EDD domain protein, DegV family compare
Dsui_1551 +0.3 1.5 DNA mismatch repair protein MutL compare
Dsui_2321 +0.3 1.8 site-specific recombinase compare
Dsui_3167 +0.3 1.8 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_2973 +0.3 1.7 putative arginyl-tRNA:protein arginylyltransferase compare
Dsui_1894 +0.3 1.0 E3 Ubiquitin ligase compare
Dsui_0455 +0.3 1.7 putative integral membrane protein compare
Dsui_0450 +0.3 0.9 MAF protein compare
Dsui_0800 +0.3 1.5 hypothetical protein (DUF2059) compare
Dsui_1859 +0.3 1.4 hypothetical protein compare
Dsui_3152 +0.3 1.4 histidine kinase compare
Dsui_2933 +0.3 0.9 heavy metal efflux pump, cobalt-zinc-cadmium compare
Dsui_2573 +0.3 1.4 hypothetical protein compare
Dsui_3095 +0.3 0.9 Protein of unknown function (DUF2726) compare
Dsui_0041 +0.3 1.5 hypothetical protein compare
Dsui_2000 +0.3 1.9 hypothetical protein compare
Dsui_1293 +0.3 2.4 type II secretory pathway, component ExeA (predicted ATPase) compare
Dsui_1839 +0.3 1.0 hypothetical protein compare
Dsui_2658 +0.3 2.3 hypothetical protein compare
Dsui_2961 +0.3 1.2 precorrin isomerase compare
Dsui_2667 +0.3 1.2 acetyltransferase compare
Dsui_2538 +0.3 2.0 acetoacetyl-CoA reductase compare
Dsui_3485 +0.3 2.2 signal transduction histidine kinase regulating C4-dicarboxylate transport system compare
Dsui_0635 +0.3 2.1 periplasmic component of amino acid ABC-type transporter/signal transduction system compare
Dsui_3090 +0.3 1.2 hypothetical protein compare
Dsui_2360 +0.3 1.0 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Dsui_1152 +0.3 1.8 Ni,Fe-hydrogenase I large subunit compare
Dsui_1384 +0.3 1.2 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
Dsui_2131 +0.3 1.5 tRNA-Arg compare
Dsui_0636 +0.3 2.2 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family compare
Dsui_1262 +0.3 2.0 TRAP transporter, DctM subunit compare
Dsui_1304 +0.3 0.8 cytochrome c553 compare
Dsui_2977 +0.3 1.5 RNA polymerase sigma factor, sigma-70 family compare
Dsui_3478 +0.3 1.7 hypothetical protein compare
Dsui_0405 +0.3 2.1 type I secretion outer membrane protein, TolC family compare
Dsui_3016 +0.3 1.4 hypothetical protein compare
Dsui_2158 +0.3 0.9 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Dsui_3453 +0.3 1.4 cation diffusion facilitator family transporter compare
Dsui_2911 +0.3 0.9 cation/cationic drug transporter compare
Dsui_3024 +0.3 2.1 phosphate transport regulator related to PhoU compare
Dsui_3379 +0.3 1.4 S-methyl-5-thioribose-1-phosphate isomerase compare
Dsui_0804 +0.3 2.2 hypothetical protein compare
Dsui_3144 +0.3 1.6 type IV pilus biogenesis/stability protein PilW compare
Dsui_0290 +0.3 2.5 SSS sodium solute transporter compare
Dsui_2323 +0.3 1.3 protein of unknown function (DUF1857) compare
Dsui_1699 +0.3 2.1 cation/cationic drug transporter compare
Dsui_1646 +0.3 1.1 cAMP-binding protein compare
Dsui_0895 +0.3 1.2 nitrogen regulatory protein PII compare
Dsui_2242 +0.3 1.5 hypothetical protein compare
Dsui_2625 +0.3 2.8 hypothetical protein compare
Dsui_3283 +0.3 1.2 formate dehydrogenase accessory protein FdhE compare
Dsui_1367 +0.3 2.1 crcB protein compare
Dsui_2319 +0.3 1.6 transcriptional regulator compare
Dsui_3285 +0.3 2.2 histidine kinase,HAMP domain-containing protein,histidine kinase compare
Dsui_1728 +0.3 2.1 flagellar motor protein compare
Dsui_2367 +0.3 1.8 RNA methyltransferase, TrmH family, group 1 compare
Dsui_0743 +0.3 1.2 phosphotransferase system HPr (HPr) family protein compare
Dsui_0300 +0.3 2.1 response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain compare
Dsui_2090 +0.3 0.9 transcriptional regulator compare
Dsui_1536 +0.3 1.7 PilZ domain-containing protein compare
Dsui_2872 +0.3 1.1 FKBP-type peptidyl-prolyl cis-trans isomerase compare
Dsui_0695 +0.3 1.7 putative ATPase of the PP-loop superfamily implicated in cell cycle control compare
Dsui_2811 +0.3 0.8 ABC-type transport system involved in resistance to organic solvents, ATPase component compare
Dsui_3282 +0.3 2.0 formate dehydrogenase, alpha subunit compare
Dsui_2581 +0.3 2.5 putative HD superfamily hydrolase compare
Dsui_1104 +0.3 1.8 putative thioesterase compare
Dsui_1151 +0.3 2.1 transcriptional regulator compare
Dsui_1060 +0.3 1.3 putative ATPase (AAA+ superfamily) compare
Dsui_2353 +0.3 1.8 transcriptional regulator compare
Dsui_1579 +0.3 1.5 ABC-type branched-chain amino acid transport system, periplasmic component compare
Dsui_1975 +0.3 1.6 MoxR-like ATPase compare


Specific Phenotypes

None in this experiment

For Dechlorosoma suillum PS in anaerobic experiments

For anaerobic Sodium D,L-Lactate across organisms