Experiment set28IT057 for Klebsiella michiganensis M5al

Compare to:

Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS17720 +2.1 1.1 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS11700 +1.6 2.6 hypothetical protein compare
BWI76_RS01385 +1.5 2.5 potassium transporter compare
BWI76_RS04060 +1.4 3.3 hypothetical protein compare
BWI76_RS09255 +1.3 3.0 hypothetical protein compare
BWI76_RS07595 +1.3 2.5 putative oxidoreductase compare
BWI76_RS23015 +1.3 2.6 cobalt transporter ATP-binding subunit compare
BWI76_RS05880 +1.3 0.8 AraC-type DNA-binding domain-containing protein compare
BWI76_RS27425 +1.3 1.4 DNA-directed RNA polymerase subunit omega compare
BWI76_RS13420 +1.2 2.5 ABC transporter permease compare
BWI76_RS00865 +1.2 6.2 DNA-binding transcriptional regulator OxyR compare
BWI76_RS12985 +1.2 2.1 transcriptional regulator compare
BWI76_RS23020 +1.2 1.5 cobalamin biosynthesis protein CbiQ compare
BWI76_RS20730 +1.1 2.1 hypothetical protein compare
BWI76_RS20930 +1.1 1.8 arsenate reductase (glutaredoxin) compare
BWI76_RS04530 +1.1 1.4 peptidylprolyl isomerase SurA compare
BWI76_RS10415 +1.1 3.4 endoribonuclease L-PSP compare
BWI76_RS27455 +1.1 2.3 DUF805 domain-containing protein compare
BWI76_RS16525 +1.1 3.6 cyclopropane-fatty-acyl-phospholipid synthase compare
BWI76_RS05465 +1.1 1.6 amidohydrolase compare
BWI76_RS16645 +1.0 2.6 DeoR family transcriptional regulator compare
BWI76_RS26150 +1.0 1.9 molecular chaperone Hsp33 compare
BWI76_RS07730 +1.0 1.6 iron-enterobactin transporter membrane protein compare
BWI76_RS18335 +1.0 4.2 DNA-binding response regulator compare
BWI76_RS00715 +1.0 2.1 two-component sensor histidine kinase compare
BWI76_RS24270 +1.0 3.7 membrane protein compare
BWI76_RS17530 +1.0 1.3 hypothetical protein compare
BWI76_RS07285 +1.0 2.4 LysR family transcriptional regulator compare
BWI76_RS18385 +1.0 1.4 hypothetical protein compare
BWI76_RS16280 +1.0 3.1 mannose-6-phosphate isomerase compare
BWI76_RS23580 +1.0 1.9 hypothetical protein compare
BWI76_RS21490 +1.0 6.4 GGDEF domain-containing protein compare
BWI76_RS05655 +0.9 2.0 hypothetical protein compare
BWI76_RS23470 +0.9 7.1 hypothetical protein compare
BWI76_RS07780 +0.9 1.3 hypothetical protein compare
BWI76_RS19470 +0.9 2.2 DNA-binding response regulator compare
BWI76_RS05950 +0.9 1.7 polar amino acid ABC transporter inner membrane subunit compare
BWI76_RS06595 +0.9 1.9 hypothetical protein compare
BWI76_RS09110 +0.9 3.5 glutathione ABC transporter permease GsiD compare
BWI76_RS06730 +0.9 2.4 lac repressor compare
BWI76_RS10380 +0.9 2.6 polar amino acid ABC transporter inner membrane subunit compare
BWI76_RS13560 +0.9 0.9 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS24720 +0.9 1.1 hypothetical protein compare
BWI76_RS12215 +0.9 4.0 HNH endonuclease compare
BWI76_RS16425 +0.9 1.3 hypothetical protein compare
BWI76_RS17110 +0.9 1.5 vitamin B12 ABC transporter permease BtuC compare
BWI76_RS24945 +0.9 1.2 glutamine amidotransferase compare
BWI76_RS09530 +0.8 1.1 hypothetical protein compare
BWI76_RS19865 +0.8 1.1 ecotin compare
BWI76_RS11810 +0.8 1.8 outer membrane protein OmpW compare
BWI76_RS21460 +0.8 1.1 translation inhibitor protein RaiA compare
BWI76_RS14615 +0.8 1.2 hypothetical protein compare
BWI76_RS20230 +0.8 0.7 hypothetical protein compare
BWI76_RS16935 +0.8 1.2 shikimate dehydrogenase compare
BWI76_RS08350 +0.8 0.9 carboxylase compare
BWI76_RS04055 +0.8 7.0 GGDEF domain-containing protein compare
BWI76_RS09735 +0.8 3.0 formate acetyltransferase compare
BWI76_RS10770 +0.8 1.0 pyrimidine utilization protein C compare
BWI76_RS18575 +0.8 0.9 transcriptional regulator compare
BWI76_RS11790 +0.8 2.2 acyl-CoA thioesterase compare
BWI76_RS17340 +0.8 3.2 NarK family nitrate/nitrite MFS transporter compare
BWI76_RS26245 +0.8 1.1 transcriptional regulator compare
BWI76_RS21485 +0.8 4.6 DUF4154 domain-containing protein compare
BWI76_RS09625 +0.8 1.2 hypothetical protein compare
BWI76_RS16290 +0.8 2.5 Mal regulon transcriptional regulator MalI compare
BWI76_RS08315 +0.8 2.1 K+-transporting ATPase subunit B compare
BWI76_RS20910 +0.8 2.9 glycine cleavage system transcriptional repressor compare
BWI76_RS11805 +0.8 3.0 hypothetical protein compare
BWI76_RS14915 +0.8 1.8 hypothetical protein compare
BWI76_RS17075 +0.8 2.6 3-deoxy-7-phosphoheptulonate synthase compare
BWI76_RS23505 +0.8 6.4 ferrous iron transporter B compare
BWI76_RS24390 +0.8 1.6 hypothetical protein compare
BWI76_RS18920 +0.8 2.1 ATP phosphoribosyltransferase compare
BWI76_RS07525 +0.8 2.2 ABC transporter permease compare
BWI76_RS01775 +0.8 1.1 hypothetical protein compare
BWI76_RS24925 +0.7 1.4 DnaA initiator-associating protein DiaA compare
BWI76_RS23500 +0.7 6.0 hypothetical protein compare
BWI76_RS21110 +0.7 4.9 hypothetical protein compare
BWI76_RS24810 +0.7 2.5 hypothetical protein compare
BWI76_RS24180 +0.7 1.6 hypothetical protein compare
BWI76_RS00240 +0.7 1.3 FMN-binding protein MioC compare
BWI76_RS18755 +0.7 1.1 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS12485 +0.7 2.8 TyrR family transcriptional regulator compare
BWI76_RS06815 +0.7 1.3 adenine phosphoribosyltransferase compare
BWI76_RS02655 +0.7 1.5 hypothetical protein compare
BWI76_RS27735 +0.7 1.8 hypothetical protein compare
BWI76_RS20675 +0.7 3.5 GMP synthase compare
BWI76_RS18270 +0.7 1.5 hypothetical protein compare
BWI76_RS22630 +0.7 2.3 LysR family transcriptional regulator compare
BWI76_RS02420 +0.7 2.2 entericidin EcnAB compare
BWI76_RS05810 +0.7 0.9 hypothetical protein compare
BWI76_RS07510 +0.7 2.1 hypothetical protein compare
BWI76_RS18810 +0.7 1.7 nitrogenase iron protein compare
BWI76_RS15045 +0.7 1.0 LysR family transcriptional regulator compare
BWI76_RS26140 +0.7 1.7 GMP/IMP nucleotidase compare
BWI76_RS17300 +0.7 1.1 tRNA-Tyr compare
BWI76_RS11125 +0.7 1.1 metal-dependent hydrolase compare
BWI76_RS04625 +0.7 2.3 glucose uptake inhibitor SgrT compare
BWI76_RS12185 +0.7 1.3 hypothetical protein compare
BWI76_RS17375 +0.7 1.5 nitrate ABC transporter, permease protein compare
BWI76_RS00380 +0.7 3.6 oxygen-independent coproporphyrinogen III oxidase compare
BWI76_RS16230 +0.7 1.5 dihydromonapterin reductase compare
BWI76_RS26215 +0.7 3.0 glycogen-branching enzyme compare
BWI76_RS17910 +0.7 2.4 hypothetical protein compare
BWI76_RS16910 +0.7 0.9 2-keto-4-pentenoate hydratase compare
BWI76_RS10745 +0.7 0.8 hypothetical protein compare
BWI76_RS01210 +0.7 0.7 tyrosine recombinase XerC compare
BWI76_RS20695 +0.7 1.7 sulfate/thiosulfate transporter permease subunit compare
BWI76_RS11180 +0.7 2.7 hypothetical protein compare
BWI76_RS10070 +0.7 3.2 BAX inhibitor protein compare
BWI76_RS12080 +0.7 0.9 hypothetical protein compare
BWI76_RS20785 +0.7 0.8 ethanolamine utilization protein EutJ compare
BWI76_RS24150 +0.7 3.0 tRNA (guanosine(46)-N7)-methyltransferase TrmB compare
BWI76_RS06060 +0.7 2.1 DNA-binding response regulator compare
BWI76_RS19375 +0.7 0.7 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS09090 +0.7 2.1 beta-aspartyl-peptidase compare
BWI76_RS20245 +0.7 2.3 transketolase subunit B compare
BWI76_RS21685 +0.7 1.0 hypothetical protein compare
BWI76_RS24965 +0.6 1.9 SCP2 domain-containing protein compare
BWI76_RS22815 +0.6 4.3 hybrid sensor histidine kinase/response regulator compare
BWI76_RS04175 +0.6 2.0 energy-dependent translational throttle protein EttA compare
BWI76_RS19330 +0.6 0.7 HAD family hydrolase compare
BWI76_RS17930 +0.6 1.6 cold-shock protein CspC compare
BWI76_RS13500 +0.6 2.0 TonB-dependent receptor compare
BWI76_RS11300 +0.6 0.8 cupin compare
BWI76_RS12305 +0.6 1.8 hypothetical protein compare
BWI76_RS21105 +0.6 2.8 penicillin-binding protein 1C compare
BWI76_RS14620 +0.6 1.7 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase compare
BWI76_RS06190 +0.6 1.2 hypothetical protein compare
BWI76_RS17915 +0.6 3.1 membrane protein compare
BWI76_RS25915 +0.6 2.3 protein SlyX compare
BWI76_RS07640 +0.6 0.9 short chain dehydrogenase compare
BWI76_RS20915 +0.6 2.3 peroxiredoxin compare
BWI76_RS21285 +0.6 1.2 HAD family hydrolase compare
BWI76_RS19680 +0.6 2.8 catecholate siderophore receptor CirA compare
BWI76_RS01035 +0.6 3.2 ADP-ribosylation/crystallin J1 compare
BWI76_RS24500 +0.6 1.1 urease subunit gamma compare
BWI76_RS23675 +0.6 2.0 allulose-6-phosphate 3-epimerase compare
BWI76_RS23490 +0.6 3.3 fimbrial protein compare
BWI76_RS18235 +0.6 1.8 trehalose-phosphatase compare
BWI76_RS09025 +0.6 0.7 GntR family transcriptional regulator compare
BWI76_RS01585 +0.6 3.3 transcriptional regulator compare
BWI76_RS09275 +0.6 1.8 major capsid protein compare
BWI76_RS17230 +0.6 2.5 peptide ABC transporter permease compare
BWI76_RS17980 +0.6 1.6 RNA chaperone ProQ compare
BWI76_RS24385 +0.6 3.1 phosphodiesterase compare
BWI76_RS15800 +0.6 2.0 transcriptional regulator compare
BWI76_RS04580 +0.6 3.5 L-ribulose-5-phosphate 4-epimerase compare
BWI76_RS26285 +0.6 2.3 glycerophosphodiester phosphodiesterase compare
BWI76_RS17370 +0.6 0.9 nitrate transporter NasD compare
BWI76_RS27140 +0.6 2.1 L-selenocysteinyl-tRNA(Sec) synthase compare
BWI76_RS17235 +0.6 2.3 peptide ABC transporter permease compare
BWI76_RS11750 +0.6 2.0 chitooligosaccharide deacetylase compare
BWI76_RS14710 +0.6 2.4 FAD-dependent oxidoreductase compare
BWI76_RS16270 +0.6 2.0 fumarate hydratase, class II compare
BWI76_RS19320 +0.6 2.1 putative ABC transport system periplasmic binding protein compare
BWI76_RS15400 +0.6 2.6 anti-RssB factor compare
BWI76_RS20610 +0.6 1.8 LysR family transcriptional regulator compare
BWI76_RS16210 +0.6 1.1 hypothetical protein compare
BWI76_RS26910 +0.6 1.9 hypothetical protein compare
BWI76_RS20035 +0.6 1.9 hypothetical protein compare
BWI76_RS04845 +0.6 2.4 nicotinate-nucleotide pyrophosphorylase compare
BWI76_RS13495 +0.6 1.6 hypothetical protein compare
BWI76_RS16735 +0.6 2.2 cold-shock protein compare
BWI76_RS21340 +0.6 0.8 SoxR reducing system protein RseC compare
BWI76_RS01005 +0.6 2.4 CarD family transcriptional regulator compare
BWI76_RS21495 +0.6 1.7 outer membrane lipoprotein compare
BWI76_RS21235 +0.6 0.8 hypothetical protein compare
BWI76_RS22125 +0.6 0.9 membrane protein compare
BWI76_RS23730 +0.6 3.1 glycerate kinase compare
BWI76_RS11880 +0.6 2.2 23S rRNA pseudouridylate synthase B compare
BWI76_RS15120 +0.6 1.8 hypothetical protein compare
BWI76_RS14935 +0.6 0.8 NIPSNAP family containing protein compare
BWI76_RS06230 +0.6 1.9 DNA-binding response regulator compare
BWI76_RS21780 +0.6 1.5 S-(hydroxymethyl)glutathione synthase compare
BWI76_RS03815 +0.6 1.9 hypothetical protein compare
BWI76_RS20250 +0.6 1.6 hypothetical protein compare
BWI76_RS19995 +0.6 1.7 IclR family transcriptional regulator compare
BWI76_RS13685 +0.6 1.3 IclR family transcriptional regulator compare
BWI76_RS16920 +0.6 1.0 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS07605 +0.6 1.3 N-acetyltransferase GCN5 compare
BWI76_RS14770 +0.6 0.8 PTS IIA 2 domain protein compare
BWI76_RS17565 +0.6 0.6 hypothetical protein compare
BWI76_RS08205 +0.6 2.0 DNA-binding transcriptional dual regulator NagC compare
BWI76_RS17315 +0.6 1.2 EamA family transporter compare
BWI76_RS16090 +0.6 0.7 two-component system response regulator DcuR compare
BWI76_RS20410 +0.6 2.0 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC compare
BWI76_RS27830 +0.6 1.2 type I toxin-antitoxin system toxin TisB compare
BWI76_RS20205 +0.6 2.2 aminotransferase AlaT compare
BWI76_RS14730 +0.6 2.3 4-oxalocrotonate tautomerase compare
BWI76_RS07305 +0.5 1.4 sucrose operon repressor compare
BWI76_RS13840 +0.5 1.4 MBL fold metallo-hydrolase compare
BWI76_RS07815 +0.5 2.3 hypothetical protein compare
BWI76_RS19195 +0.5 1.6 nickel ABC transporter permease compare
BWI76_RS02880 +0.5 1.2 membrane protein compare
BWI76_RS07265 +0.5 1.8 ABC transporter ATP-binding protein compare
BWI76_RS16610 +0.5 1.8 hypothetical protein compare
BWI76_RS16315 +0.5 0.9 SirA-like protein compare
BWI76_RS23495 +0.5 3.7 hypothetical protein compare
BWI76_RS16235 +0.5 1.5 membrane protein compare


Specific Phenotypes

For 7 genes in this experiment

For supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered across organisms