Experiment set23S656 for Agrobacterium fabrum C58

Compare to:

P2L5

200 most important genes:

  gene name fitness t score description  
Atu0161 -4.1 -10.1 biopolymer transport protein compare
Atu1750 -4.0 -3.5 phosphoribosyl c-AMP cyclohydrolase compare
Atu0030 -3.8 -1.3 phosphocarrier protein HPr compare
Atu3598 -3.4 -2.0 thiol:disulfide interchange protein compare
Atu0163 -3.3 -6.9 tonB protein compare
Atu4711 -3.3 -6.6 two component sensor kinase compare
Atu3468 -3.1 -1.1 hypothetical protein compare
Atu0162 -3.1 -5.9 biopolymer transport protein compare
Atu4072 -3.1 -1.8 nodulation protein N compare
Atu3885 -3.0 -5.6 inositol monophosphatase compare
Atu0537 -3.0 -2.0 histidinol dehydrogenase compare
Atu0153 -2.8 -5.0 transcriptional regulator, Fur family compare
Atu0031 -2.7 -0.9 PTS system, IIA component compare
Atu0678 -2.7 -3.7 histidyl-tRNA synthetase compare
Atu2040 -2.7 -3.1 phosphoserine phosphatase compare
Atu2207 -2.6 -3.5 two component sensor kinase compare
Atu0038 -2.6 -3.5 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu0486 -2.6 -3.0 dihydroorotate dehydrogenase compare
Atu1030 -2.5 -1.4 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu4773 -2.4 -2.0 two component response regulator compare
Atu1364 -2.4 -4.2 ATP-dependent Clp protease, ATP-binding subunit compare
Atu1844 -2.4 -1.6 Phosphoribosylformylglycinamidine synthetase compare
Atu0036 -2.4 -2.0 hypothetical protein compare
Atu3755 -2.3 -2.7 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0679 -2.3 -2.8 ATP phosphoribosyltransferase compare
Atu1327 -2.2 -2.0 NADH-ubiquinone oxidoreductase compare
Atu1850 -2.1 -3.0 phosphoribosylformylglycinamidine synthetase II compare
Atu0099 -2.1 -10.3 prephenate dehydratase compare
Atu3706 -2.1 -3.2 D-3-phosphoglycerate dehydrogenase compare
Atu0043 -2.1 -1.4 imidazoleglycerol-phosphate dehydratase compare
Atu0912 -2.1 -1.0 Na+/H+ antiporter compare
Atu5451 -2.1 -1.4 hypothetical protein compare
Atu2264 -2.0 -8.0 2-isopropylmalate synthase compare
Atu1644 -2.0 -2.2 hypothetical protein compare
Atu1446 -2.0 -1.9 two component response regulator compare
Atu3908 -2.0 -8.6 GntR family transcriptional regulator compare
Atu1359 -2.0 -1.0 dnaK deletion suppressor protein compare
Atu1683 -2.0 -1.3 hypothetical protein compare
Atu3754 -2.0 -3.6 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu2289 -2.0 -7.5 anthranilate synthase component I and II compare
Atu2442 -2.0 -2.7 hypothetical protein compare
Atu8138 -2.0 -1.2 hypothetical protein compare
Atu2183 -1.9 -6.7 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu1535 -1.9 -3.7 cytochrome c oxidase, FixQ chain compare
Atu4317 -1.9 -1.3 TetR family transcriptional regulator compare
Atu1140 -1.9 -2.9 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0141 -1.9 -1.1 cytochrome O ubiquinol oxidase subunit I compare
Atu3730 -1.9 -1.1 hypothetical protein compare
Atu1307 -1.8 -3.4 dihydroorotase compare
Atu1845 -1.8 -2.4 phosphoribosylformylglycinamidine synthase I compare
Atu2522 -1.8 -4.8 agrobacterium chromosomal virulence protein B compare
Atu6020 -1.8 -4.8 conserved hypothetical protein compare
Atu1847 -1.8 -1.1 hypothetical protein compare
Atu4610 -1.8 -9.3 sugar nucleotide epimerase/dehydratase compare
Atu1754 -1.7 -1.5 hypothetical protein compare
Atu0703 -1.7 -2.2 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
Atu0978 -1.7 -2.9 two component response regulator compare
Atu1422 -1.7 -5.7 transcriptional regulator, MarR family compare
Atu2709 -1.7 -10.7 3-isopropylmalate dehydratase, large subunit compare
Atu1619 -1.7 -2.8 protein-export membrane protein SECG compare
Atu2073 -1.7 -3.1 membrane protein compare
Atu5430 -1.6 -1.1 hypothetical protein compare
Atu4614 -1.6 -6.4 glycosyltransferase compare
Atu4166 -1.6 -1.7 UDP-glucose 4-epimerase compare
Atu1679 -1.6 -2.2 peptidyl prolyl cis-trans isomerase compare
Atu2694 -1.6 -2.3 hypothetical protein compare
Atu6098 -1.6 -0.5 transcriptional regulator, HTH family compare
Atu2791 -1.6 -5.1 3-isopropylmalate dehydrogenase compare
Atu1205 -1.6 -5.5 threonine dehydratase compare
Atu1527 -1.6 -4.1 nitrogen fixation protein FixS compare
Atu0050 -1.6 -3.1 two component response regulator compare
Atu1077 -1.6 -2.1 DNA repair protein compare
Atu3121 -1.5 -1.2 cold shock protein compare
Atu2433 -1.5 -1.0 hypothetical protein compare
Atu2125 -1.5 -0.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu8018 -1.5 -0.8 hypothetical protein compare
Atu0401 -1.4 -4.9 fructokinase compare
Atu0422 -1.4 -1.5 ABC transporter, membrane spanning protein compare
Atu4618 -1.4 -8.0 dTDP-rhamnose-3,5-epimerase compare
Atu1495 -1.4 -2.2 hypothetical protein compare
Atu1225 -1.4 -1.4 hypothetical protein compare
Atu1534 -1.4 -5.6 cytochrome-c oxidase, FixP chain compare
Atu3763 -1.4 -0.9 hypothetical protein compare
Atu1793 -1.4 -4.2 phosphatidylcholine synthase compare
Atu6019 -1.4 -8.5 D-nopaline dehydrogenase compare
Atu1889 -1.4 -1.2 diacylglycerol kinase compare
Atu0388 -1.4 -6.8 two component sensor kinase compare
Atu4685 -1.4 -5.1 LacI family transcriptional regulator compare
Atu0580 -1.4 -1.9 flagellar biosynthetic protein compare
Atu1588 -1.4 -1.6 homoserine dehydrogenase compare
Atu4055 -1.4 -4.1 endo-1,3-1,4-beta-glycanase compare
Atu4160 -1.4 -4.2 RNA polymerase sigma factor compare
Atu1163 -1.3 -0.9 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu8056 -1.3 -0.9 hypothetical protein compare
Atu3311 -1.3 -9.2 phosphomannose isomerase compare
Atu2718 -1.3 -4.7 homoserine O-succinyltransferase compare
Atu0298 -1.3 -2.4 orotidine 5 compare
Atu1141 -1.3 -3.7 Phosphoribosylglycinamide synthetase compare
Atu2114 -1.3 -3.9 molecular chaperone, DnaJ family compare
Atu8168 -1.3 -1.4 hypothetical protein compare
Atu3387 -1.3 -2.1 sigma factor compare
Atu4498 -1.3 -4.7 hypothetical protein compare
Atu0434 -1.3 -1.4 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu5540 -1.3 -0.8 hypothetical protein compare
Atu4162 -1.3 -6.5 two-component response regulator compare
Atu3757 -1.3 -2.3 hypothetical protein compare
Atu1177 -1.3 -2.6 hypothetical protein compare
Atu1874 -1.3 -1.2 RecA protein compare
Atu0340 -1.2 -1.3 SAM dependent methyltransferase compare
Atu3486 -1.2 -1.2 DeoR family transcriptional regulator compare
Atu1468 -1.2 -6.5 hypothetical protein compare
Atu0647 -1.2 -3.1 phosphoribosylamine--glycine ligase compare
Atu6021 -1.2 -6.0 D-nopaline dehydrogenase compare
Atu4617 -1.2 -5.2 dTDP-D-glucose-4,6-dehydratase compare
Atu3353 -1.2 -5.5 mannose-1-phosphate guanylyltransferase compare
Atu2237 -1.2 -3.2 cytochrome c1 compare
Atu1173 -1.2 -6.0 MFS permease compare
Atu2649 -1.2 -1.9 hypothetical protein compare
Atu1530 -1.2 -6.6 nitrogen fixation protein FixG compare
Atu3466 -1.2 -1.9 ArsR family transcriptional regulator compare
Atu0354 -1.2 -1.1 ferric uptake regulator compare
Atu4615 -1.2 -6.7 glucose-1-phosphate thymidylyltransferase compare
Atu0361 -1.2 -1.1 transcriptional regulator compare
Atu1687 -1.2 -2.5 anthranilate phosphoribosyltransferase compare
Atu5160 -1.2 -1.1 transcriptional regulator protein compare
Atu1354 -1.2 -0.5 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu3634 -1.2 -4.0 penicillin-binding protein dacf precursor compare
Atu0086 -1.2 -0.5 ribosome-binding factor A compare
Atu0062 -1.2 -4.4 transcriptional regulator, ROK family compare
Atu1677 -1.2 -1.8 queuine tRNA-ribosyltransferase compare
Atu8159 -1.1 -1.5 hypothetical protein compare
Atu4499 -1.1 -3.7 hypothetical protein compare
Atu3727 -1.1 -1.3 hypothetical protein compare
Atu0638 -1.1 -1.7 hypothetical protein compare
Atu8167 -1.1 -4.6 putative transmembrane protein compare
Atu0419 -1.1 -1.9 two component sensor kinase compare
Atu0999 -1.1 -1.9 magnesium transport protein compare
Atu1694 -1.1 -2.1 hypothetical protein compare
Atu1308 -1.1 -1.8 aspartate carbamoyl transferase catalytic subunit compare
Atu3609 -1.1 -1.9 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Atu0971 -1.1 -0.7 two component sensor kinase compare
Atu0536 -1.1 -3.0 hypothetical protein compare
Atu1529 -1.1 -2.9 nitrogen fixation protein FixH compare
Atu1417 -1.1 -2.3 enoyl-CoA hydratase compare
Atu1803 -1.1 -3.5 cold shock protein compare
Atu1528 -1.1 -5.3 nitrogen fixation protein FixI compare
Atu0101 -1.1 -2.8 cytochrome c compare
Atu1380 -1.1 -4.0 zinc metallopeptidase compare
Atu1513 -1.1 -3.1 ABC excinuclease subunit A compare
Atu0225 -1.1 -0.5 hypothetical protein compare
Atu0093 -1.1 -2.4 Recombination protein compare
Atu5173 -1.1 -1.3 dehydrogenase compare
Atu2790 -1.1 -1.2 3-isopropylmalate dehydratase, small subunit compare
Atu6150 -1.1 -5.8 P-450 monooxygenase compare
Atu8163 -1.1 -3.3 hypothetical protein compare
Atu0051 -1.1 -2.1 two component sensor kinase compare
Atu0368 -1.0 -2.0 tRNA pseudouridine synthase I compare
Atu4616 -1.0 -0.9 dTDP-4-dehydrorhamnose reductase compare
Atu4232 -1.0 -2.8 GntR family transcriptional regulator compare
Atu5513 -1.0 -1.5 cold shock protein compare
Atu3619 -1.0 -1.2 hypothetical protein compare
Atu0784 -1.0 -1.8 hypothetical protein compare
Atu2609 -1.0 -3.8 transcriptional regulator, ROK family compare
Atu0977 -1.0 -1.9 serine protease DO-like protease compare
Atu5047 -1.0 -3.5 hypothetical protein compare
Atu1667 -1.0 -0.9 hypothetical protein compare
Atu0630 -1.0 -1.4 hypothetical protein compare
Atu1688 -1.0 -1.5 indole-3-glycerol-phosphate synthase compare
Atu4613 -1.0 -5.3 glycosyltransferase compare
Atu2439 -1.0 -0.5 hypothetical protein compare
Atu0803 -1.0 -7.3 pyruvate,orthophosphate dikinase compare
Atu3469 -1.0 -1.5 phosphoglyceromutase compare
Atu4451 -1.0 -4.4 mannitol 2-dehydrogenase compare
Atu8088 -1.0 -1.4 hypothetical protein compare
Atu0601 -1.0 -4.1 oxidoreductase compare
Atu2650 -1.0 -5.2 glycerol-3-phosphate dehydrogenase compare
Atu2683 -1.0 -1.2 hypothetical protein compare
Atu1904 -1.0 -3.2 transcriptional regulator compare
Atu0107 -1.0 -1.8 hypothetical protein compare
Atu4144 -1.0 -0.5 hypothetical protein compare
Atu3707 -1.0 -0.6 phosphoserine aminotransferase compare
Atu0039 -1.0 -0.6 imidazoleglycerol-phosphate synthase cyclase compare
Atu1902 -1.0 -3.0 transketolase compare
Atu0041 -0.9 -0.6 glutamine amidotransferase compare
Atu0070 -0.9 -5.6 ribonucleoside-diphosphate reductase 2 alpha chain compare
Atu3604 -0.9 -1.5 hypoxanthine phosphoribosyltransferase compare
Atu2730 -0.9 -6.7 beta (1-->2) glucan biosynthesis protein compare
Atu0746 -0.9 -2.3 hypothetical protein compare
Atu3887 -0.9 -1.7 small heat shock protein compare
Atu1967 -0.9 -2.6 hypothetical protein compare
Atu1734 -0.9 -1.2 hypothetical protein compare
Atu3219 -0.9 -5.2 dihydroxy-acid dehydratase compare
Atu2083 -0.9 -1.4 DNA repair protein RecN compare
Atu1062 -0.9 -1.0 phosphatidylserine synthase compare
Atu0972 -0.9 -1.8 lipA protein compare
Atu1099 -0.9 -2.6 hypothetical protein compare
Atu8023 -0.9 -0.9 hypothetical protein compare
Atu2585 -0.9 -3.1 hypothetical protein compare
Atu0769 -0.9 -0.6 protoheme IX farnesyltransferase compare
Atu3485 -0.9 -3.4 short chain dehydrogenase compare


Specific Phenotypes

For 12 genes in this experiment

For no phage Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct in Agrobacterium fabrum C58

For no phage Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct across organisms