Experiment set1S486 for Alteromonas macleodii MIT1002

Compare to:

monoculture; Experiment A, time point 6

200 most important genes:

  gene name fitness t score description  
MIT1002_02348 -5.6 -3.9 hypothetical protein compare
MIT1002_03690 -5.6 -3.9 DnaK suppressor protein compare
MIT1002_00471 -5.5 -3.8 N-acetyl-gamma-glutamyl-phosphate reductase compare
MIT1002_02524 -5.4 -3.8 Amidophosphoribosyltransferase compare
MIT1002_00504 -5.4 -3.7 Acetolactate synthase isozyme 3 small subunit compare
MIT1002_01027 -5.3 -5.2 Phosphoribosylformylglycinamidine synthase compare
MIT1002_00948 -5.3 -3.7 3-isopropylmalate dehydrogenase compare
MIT1002_02636 -5.3 -3.6 Imidazole glycerol phosphate synthase subunit HisH compare
MIT1002_01263 -5.3 -3.6 7-cyano-7-deazaguanine synthase compare
MIT1002_04045 -5.3 -3.6 Ketol-acid reductoisomerase compare
MIT1002_02008 -5.2 -3.6 Para-aminobenzoate synthase component 1 compare
MIT1002_00949 -5.2 -3.6 2-isopropylmalate synthase compare
MIT1002_03791 -5.1 -9.9 N-acetylmuramoyl-L-alanine amidase AmiB precursor compare
MIT1002_00469 -5.1 -3.6 Ornithine carbamoyltransferase compare
MIT1002_03139 -5.1 -3.5 Glutamate synthase [NADPH] large chain precursor compare
MIT1002_00946 -5.1 -3.5 3-isopropylmalate dehydratase small subunit 1 compare
MIT1002_03179 -5.1 -3.5 Cystathionine beta-lyase PatB compare
MIT1002_00760 -5.1 -3.0 Biopolymer transport protein ExbD compare
MIT1002_02220 -5.0 -3.5 Phosphoribosylglycinamide formyltransferase compare
MIT1002_01112 -5.0 -3.5 Homoserine O-succinyltransferase compare
MIT1002_02219 -5.0 -3.5 Phosphoribosylformylglycinamidine cyclo-ligase compare
MIT1002_00377 -5.0 -3.4 Branched-chain-amino-acid aminotransferase 2 compare
MIT1002_00761 -5.0 -3.4 transport protein TonB compare
MIT1002_00522 -4.9 -3.4 N5-carboxyaminoimidazole ribonucleotide synthase compare
MIT1002_02349 -4.9 -3.4 2-hydroxypropyl-CoM lyase compare
MIT1002_01119 -4.9 -3.4 HTH-type transcriptional regulator GltC compare
MIT1002_00762 -4.9 -3.4 Anaphase-promoting complex, cyclosome, subunit 3 compare
MIT1002_04040 -4.9 -3.4 L-threonine dehydratase biosynthetic IlvA compare
MIT1002_03961 -4.9 -3.4 Phosphoribosylamine--glycine ligase compare
MIT1002_03086 -4.9 -3.4 Aspartokinase I/homoserine dehydrogenase I compare
MIT1002_00093 -4.9 -4.7 Thiazole synthase compare
MIT1002_00756 -4.8 -3.4 TonB-dependent receptor compare
MIT1002_02638 -4.8 -3.3 Imidazole glycerol phosphate synthase subunit HisF compare
MIT1002_02639 -4.8 -3.3 Phosphoribosyl-ATP pyrophosphatase compare
MIT1002_00673 -4.8 -3.3 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA compare
MIT1002_02125 -4.8 -3.3 Inner membrane protein YbaL compare
MIT1002_03015 -4.8 -3.3 aspartoacylase compare
MIT1002_01266 -4.8 -3.3 Asparagine synthetase B [glutamine-hydrolyzing] compare
MIT1002_00742 -4.8 -4.6 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase compare
MIT1002_00467 -4.8 -3.3 Argininosuccinate lyase compare
MIT1002_01382 -4.7 -9.1 ATP-dependent dethiobiotin synthetase BioD 1 compare
MIT1002_00758 -4.7 -3.3 Biopolymer transport protein ExbB compare
MIT1002_00439 -4.7 -3.3 Para-aminobenzoate synthase glutamine amidotransferase component II compare
MIT1002_02266 -4.7 -3.3 Methionine gamma-lyase compare
MIT1002_00947 -4.7 -3.3 3-isopropylmalate dehydratase large subunit compare
MIT1002_02634 -4.7 -3.2 Histidinol-phosphate aminotransferase compare
MIT1002_02993 -4.7 -3.2 D-3-phosphoglycerate dehydrogenase compare
MIT1002_00468 -4.7 -3.2 Argininosuccinate synthase compare
MIT1002_02633 -4.6 -3.2 Histidinol dehydrogenase compare
MIT1002_02702 -4.6 -3.2 Serine hydroxymethyltransferase compare
MIT1002_04044 -4.6 -3.2 HTH-type transcriptional regulator GltC compare
MIT1002_00759 -4.6 -3.1 protein TolQ compare
MIT1002_02635 -4.6 -3.2 Histidine biosynthesis bifunctional protein HisB compare
MIT1002_03140 -4.6 -3.2 Glutamate synthase [NADPH] small chain compare
MIT1002_00466 -4.6 -3.2 Amino-acid acetyltransferase compare
MIT1002_00757 -4.5 -3.1 hypothetical protein compare
MIT1002_01379 -4.5 -3.1 Biotin synthase compare
MIT1002_03539 -4.5 -2.1 Bifunctional protein BirA compare
MIT1002_02708 -4.5 -3.1 Phosphoserine phosphatase compare
MIT1002_00068 -4.5 -4.3 Chorismate--pyruvate lyase compare
MIT1002_01466 -4.4 -3.1 Carbamoyl-phosphate synthase small chain compare
MIT1002_00097 -4.4 -11.1 Phosphomethylpyrimidine synthase compare
MIT1002_00879 -4.4 -3.1 Universal stress protein E compare
MIT1002_04041 -4.4 -3.1 Dihydroxy-acid dehydratase compare
MIT1002_03185 -4.4 -5.3 Nitrogen regulation protein NR(II) compare
MIT1002_01736 -4.4 -3.0 Aminodeoxychorismate lyase compare
MIT1002_01467 -4.4 -3.0 Carbamoyl-phosphate synthase large chain compare
MIT1002_03084 -4.3 -3.0 Threonine synthase compare
MIT1002_03331 -4.3 -3.0 D-lactate dehydrogenase compare
MIT1002_00503 -4.3 -3.0 Acetolactate synthase isozyme 3 large subunit compare
MIT1002_01885 -4.3 -3.0 Gamma-glutamyl phosphate reductase compare
MIT1002_00096 -4.3 -7.7 Thiamine-phosphate synthase compare
MIT1002_01816 -4.2 -18.3 Phosphoenolpyruvate synthase compare
MIT1002_01984 -4.2 -2.9 queuosine biosynthesis protein QueD compare
MIT1002_00160 -4.2 -2.9 Diaminopimelate decarboxylase compare
MIT1002_03062 -4.2 -2.9 Pyrroline-5-carboxylate reductase compare
MIT1002_02637 -4.2 -2.9 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MIT1002_00161 -4.1 -2.7 putative small periplasmic lipoprotein compare
MIT1002_01264 -4.1 -2.9 7-carboxy-7-deazaguanine synthase compare
MIT1002_01428 -4.1 -2.8 Anthranilate synthase component II compare
MIT1002_01429 -4.0 -2.8 Anthranilate synthase component II compare
MIT1002_04026 -4.0 -2.8 BsSco compare
MIT1002_03085 -4.0 -2.8 Homoserine kinase compare
MIT1002_00437 -4.0 -2.8 Succinylornithine transaminase/acetylornithine aminotransferase compare
MIT1002_03788 -4.0 -2.7 Host factor-I protein compare
MIT1002_00113 -3.9 -7.3 Putative peroxiredoxin compare
MIT1002_01380 -3.9 -6.4 8-amino-7-oxononanoate synthase compare
MIT1002_03491 -3.8 -17.4 Phosphoenolpyruvate carboxylase compare
MIT1002_00843 -3.8 -3.7 hypothetical protein compare
MIT1002_03698 -3.8 -4.5 tRNA (guanine-N(7)-)-methyltransferase compare
MIT1002_02404 -3.8 -3.7 Glucokinase compare
MIT1002_01981 -3.8 -2.6 Inner membrane protein YejM compare
MIT1002_03330 -3.7 -6.2 L-lactate dehydrogenase [cytochrome] compare
MIT1002_01378 -3.7 -5.1 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
MIT1002_00988 -3.7 -2.5 NADPH-dependent 7-cyano-7-deazaguanine reductase compare
MIT1002_01001 -3.7 -3.6 PII uridylyl-transferase compare
MIT1002_02041 -3.6 -1.7 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase compare
MIT1002_03186 -3.6 -2.5 Nitrogen regulation protein NR(I) compare
MIT1002_00095 -3.6 -7.3 Molybdopterin-synthase adenylyltransferase compare
MIT1002_03200 -3.6 -4.9 RDD family protein compare
MIT1002_01316 -3.6 -2.5 P-protein compare
MIT1002_00470 -3.6 -7.0 Acetylglutamate kinase compare
MIT1002_01430 -3.5 -2.4 Anthranilate synthase component 1 compare
MIT1002_02306 -3.5 -4.2 Glutamate-pyruvate aminotransferase AlaA compare
MIT1002_03904 -3.5 -8.5 Beta-lactamase precursor compare
MIT1002_01352 -3.5 -10.6 Aspartate-semialdehyde dehydrogenase compare
MIT1002_00092 -3.4 -6.2 2-iminoacetate synthase compare
MIT1002_02391 -3.4 -0.9 putative membrane protein compare
MIT1002_02632 -3.4 -2.4 ATP phosphoribosyltransferase compare
MIT1002_01129 -3.4 -2.0 Carbon storage regulator compare
MIT1002_01508 -3.3 -7.8 hypothetical protein compare
MIT1002_01217 -3.3 -2.3 2-dehydropantoate 2-reductase compare
MIT1002_01544 -3.3 -7.4 D-alanyl-D-alanine carboxypeptidase compare
MIT1002_03058 -3.3 -1.3 hypothetical protein compare
MIT1002_02991 -3.3 -2.3 putative 5-formyltetrahydrofolate cyclo-ligase compare
MIT1002_02525 -3.3 -5.4 Pur regulon 18 kDa protein compare
MIT1002_00076 -3.3 -2.1 transcriptional regulator, y4mF family compare
MIT1002_00094 -3.2 -0.9 sulfur carrier protein ThiS compare
MIT1002_02653 -3.1 -1.2 Nucleoid-associated protein YbaB compare
MIT1002_01235 -3.1 -2.1 Monothiol glutaredoxin compare
MIT1002_03616 -3.1 -2.1 NAD(P)H-flavin reductase compare
MIT1002_00755 -3.1 -12.4 hypothetical protein compare
MIT1002_04134 -3.1 -11.2 Sporulation initiation inhibitor protein soj compare
MIT1002_02760 -3.1 -2.1 ATP-dependent Clp protease proteolytic subunit precursor compare
MIT1002_03908 -3.1 -7.8 NAD(P) transhydrogenase subunit alpha compare
MIT1002_01923 -3.1 -6.9 Cell division protein ZipA compare
MIT1002_00423 -3.1 -2.1 Aspartate carbamoyltransferase catalytic chain compare
MIT1002_04135 -3.0 -5.5 ParB/RepB/Spo0J family partition protein compare
MIT1002_01676 -3.0 -0.8 Exodeoxyribonuclease I compare
MIT1002_00521 -3.0 -2.1 N5-carboxyaminoimidazole ribonucleotide mutase compare
MIT1002_00109 -3.0 -9.0 Putative reactive intermediate deaminase TdcF compare
MIT1002_02394 -3.0 -7.1 Glyceraldehyde-3-phosphate dehydrogenase compare
MIT1002_01427 -2.9 -1.9 Tryptophan biosynthesis protein TrpCF compare
MIT1002_02971 -2.9 -13.4 Glycine dehydrogenase [decarboxylating] compare
MIT1002_00944 -2.9 -7.5 hypothetical protein compare
MIT1002_00825 -2.9 -5.5 Nitrogen regulatory protein compare
MIT1002_04092 -2.9 -2.0 putative type I restriction enzymeP M protein compare
MIT1002_01381 -2.9 -8.7 Malonyl-CoA O-methyltransferase BioC compare
MIT1002_01226 -2.9 -2.3 hypothetical protein compare
MIT1002_01361 -2.9 -2.8 Rut operon repressor compare
MIT1002_02400 -2.8 -9.4 4-alpha-glucanotransferase compare
MIT1002_00827 -2.8 -1.8 RNA polymerase sigma-54 factor 2 compare
MIT1002_02759 -2.8 -1.9 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MIT1002_02035 -2.8 -1.3 Dihydroorotate dehydrogenase (quinone) compare
MIT1002_03329 -2.8 -6.7 D-malate degradation protein R compare
MIT1002_02184 -2.8 -1.5 Orotidine 5'-phosphate decarboxylase compare
MIT1002_03786 -2.8 -7.2 Modulator of FtsH protease HflK compare
MIT1002_04036 -2.7 -1.5 LexA repressor compare
MIT1002_03853 -2.7 -7.3 TonB-dependent copper receptor compare
MIT1002_02973 -2.7 -8.7 Aminomethyltransferase compare
MIT1002_03785 -2.7 -7.9 Modulator of FtsH protease HflC compare
MIT1002_01533 -2.7 -2.6 Negative modulator of initiation of replication compare
MIT1002_00943 -2.7 -11.1 putative secretion ATPase, PEP-CTERM locus subfamily compare
MIT1002_02429 -2.7 -6.5 Glucose-resistance amylase regulator compare
MIT1002_02573 -2.6 -5.6 hypothetical protein compare
MIT1002_01457 -2.6 -1.0 Heat shock protein 70 compare
MIT1002_00872 -2.6 -9.8 Polyphosphate kinase compare
MIT1002_01035 -2.6 -3.4 anti-sigma28 factor FlgM compare
MIT1002_03669 -2.6 -4.0 Met regulon regulatory protein MetJ compare
MIT1002_01840 -2.6 -10.0 Protease 4 compare
MIT1002_02130 -2.6 -1.4 cbb3-type cytochrome c oxidase subunit II compare
MIT1002_00666 -2.5 -7.5 Cold-shock DEAD box protein A compare
MIT1002_03907 -2.5 -11.4 NAD(P) transhydrogenase subunit beta compare
MIT1002_02128 -2.5 -1.7 hypothetical protein compare
MIT1002_03481 -2.5 -1.7 hypothetical protein compare
MIT1002_00074 -2.5 -1.7 tRNA-Arg compare
MIT1002_00154 -2.5 -7.9 Serine acetyltransferase compare
MIT1002_04052 -2.5 -2.3 hypothetical protein compare
MIT1002_02261 -2.5 -4.3 rhombosortase compare
MIT1002_02673 -2.5 -8.6 L-lactate permease compare
MIT1002_01834 -2.5 -10.7 ATP-dependent Clp protease ATP-binding subunit ClpA compare
MIT1002_01345 -2.5 -1.3 tRNA-Ser compare
MIT1002_01515 -2.4 -2.4 Release factor glutamine methyltransferase compare
MIT1002_03488 -2.4 -1.7 Na(+)-translocating NADH-quinone reductase subunit A compare
MIT1002_01192 -2.4 -4.3 Peptide chain release factor 3 compare
MIT1002_03546 -2.4 -1.8 5S ribosomal RNA compare
MIT1002_00235 -2.4 -1.5 Glycogen synthase compare
MIT1002_02807 -2.4 -1.6 Inositol-1-monophosphatase compare
MIT1002_00012 -2.3 -1.6 Cytochrome c4 precursor compare
MIT1002_00844 -2.3 -3.9 AFG1-like ATPase compare
MIT1002_00884 -2.3 -1.4 hypothetical protein compare
MIT1002_02129 -2.3 -1.6 hypothetical protein compare
MIT1002_01292 -2.3 -4.0 Phosphohistidine phosphatase SixA compare
MIT1002_03909 -2.3 -7.9 NAD(P) transhydrogenase subunit alpha part 1 compare
MIT1002_01299 -2.3 -1.3 hypothetical protein compare
MIT1002_02133 -2.3 -1.6 putative integral membrane protein linked to a cation pump compare
MIT1002_00524 -2.2 -3.2 hypothetical protein compare
MIT1002_04093 -2.2 -0.8 Type I restriction modification DNA specificity domain protein compare
MIT1002_01362 -2.2 -11.6 Virulence-associated outer membrane protein Vir-90 compare
MIT1002_00186 -2.2 -8.1 Mgl repressor and galactose ultrainduction factor compare
MIT1002_04120 -2.2 -0.8 F0F1 ATP synthase subunit I compare
MIT1002_03668 -2.2 -8.2 NADP-dependent malic enzyme compare
MIT1002_02397 -2.2 -10.4 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating compare
MIT1002_02538 -2.2 -1.2 3-oxoacyl-[acyl-carrier-protein] synthase 1 compare
MIT1002_00498 -2.2 -1.2 tRNA-Gly compare
MIT1002_00253 -2.1 -1.2 hypothetical protein compare
MIT1002_01097 -2.1 -5.9 Flagellar biosynthetic protein FliR compare
MIT1002_01965 -2.1 -2.9 putative oxidoreductase YciK compare
MIT1002_02715 -2.1 -2.1 Elongation factor 4 compare
MIT1002_00404 -2.1 -5.6 Formyltetrahydrofolate deformylase compare


Specific Phenotypes

None in this experiment

For Alteromonas macleodii MIT1002 in pro99_seawater experiments