Experiment set1IT078 for Rhizobium sp. OAE497

Compare to:

Carnitine Hydrochloride carbon source

200 most important genes:

  gene name fitness t score description  
ABIE40_RS19355 -7.0 -4.8 thioredoxin compare
ABIE40_RS19050 -6.8 -6.6 3-isopropylmalate dehydrogenase compare
ABIE40_RS18380 -6.7 -8.0 3-isopropylmalate dehydratase large subunit compare
ABIE40_RS19415 -6.5 -13.2 phosphoenolpyruvate carboxykinase compare
ABIE40_RS18590 -6.4 -10.8 homoserine O-succinyltransferase compare
ABIE40_RS11950 -6.4 -6.2 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABIE40_RS17525 -6.3 -3.7 lipoprotein compare
ABIE40_RS02340 -6.0 -11.6 O-succinylhomoserine sulfhydrylase compare
ABIE40_RS13330 -5.8 -11.1 2-isopropylmalate synthase compare
ABIE40_RS06555 -5.8 -3.4 phosphoribosylglycinamide formyltransferase compare
ABIE40_RS09545 -5.6 -3.8 anthranilate phosphoribosyltransferase compare
ABIE40_RS17530 -5.5 -3.8 diaminopimelate decarboxylase compare
ABIE40_RS00245 -5.5 -12.7 prephenate dehydratase compare
ABIE40_RS19040 -5.4 -8.2 3-isopropylmalate dehydratase small subunit compare
ABIE40_RS10725 -5.3 -3.6 adenosylcobinamide-GDP ribazoletransferase compare
ABIE40_RS16320 -5.3 -5.1 histidinol-phosphatase compare
ABIE40_RS03660 -5.3 -3.6 ATP phosphoribosyltransferase regulatory subunit compare
ABIE40_RS19435 -5.2 -3.1 phosphoribosyl-ATP diphosphatase compare
ABIE40_RS18925 -5.1 -3.5 glutamate-5-semialdehyde dehydrogenase compare
ABIE40_RS02725 -5.1 -5.0 histidinol dehydrogenase compare
ABIE40_RS10720 -5.0 -3.4 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
ABIE40_RS19460 -5.0 -3.5 imidazoleglycerol-phosphate dehydratase HisB compare
ABIE40_RS09660 -5.0 -14.7 AI-2E family transporter compare
ABIE40_RS03665 -4.9 -4.8 ATP phosphoribosyltransferase compare
ABIE40_RS09155 -4.9 -4.9 DUF934 domain-containing protein compare
ABIE40_RS06930 -4.9 -3.4 N-acetyl-gamma-glutamyl-phosphate reductase compare
ABIE40_RS09725 -4.9 -3.4 phosphoribosyl-AMP cyclohydrolase compare
ABIE40_RS19440 -4.8 -3.3 imidazole glycerol phosphate synthase subunit HisF compare
ABIE40_RS02325 -4.8 -4.7 ornithine carbamoyltransferase compare
ABIE40_RS19330 -4.8 -3.3 phosphoribosylanthranilate isomerase compare
ABIE40_RS13410 -4.8 -3.3 anthranilate synthase compare
ABIE40_RS18920 -4.7 -7.0 glutamate 5-kinase compare
ABIE40_RS11105 -4.7 -4.6 cobyrinate a,c-diamide synthase compare
ABIE40_RS11165 -4.7 -3.2 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
ABIE40_RS06730 -4.5 -6.2 riboflavin synthase compare
ABIE40_RS17595 -4.5 -3.1 histidinol-phosphate transaminase compare
ABIE40_RS14990 -4.5 -13.3 glycosyltransferase family 2 protein compare
ABIE40_RS14980 -4.5 -3.1 glycoside hydrolase family 16 protein compare
ABIE40_RS11150 -4.5 -8.6 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
ABIE40_RS06560 -4.5 -4.4 phosphoribosylformylglycinamidine cyclo-ligase compare
ABIE40_RS09150 -4.5 -20.1 nitrite/sulfite reductase compare
ABIE40_RS19450 -4.5 -3.1 imidazole glycerol phosphate synthase subunit HisH compare
ABIE40_RS11155 -4.5 -3.1 cobaltochelatase subunit CobN compare
ABIE40_RS11495 -4.5 -4.3 acetolactate synthase 3 large subunit compare
ABIE40_RS16645 -4.5 -19.2 LacI family DNA-binding transcriptional regulator compare
ABIE40_RS20440 -4.5 -3.1 cobalt-precorrin-6A reductase compare
ABIE40_RS20435 -4.4 -3.0 precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE compare
ABIE40_RS11175 -4.4 -6.6 cobyric acid synthase compare
ABIE40_RS09360 -4.3 -5.1 excinuclease ABC subunit UvrA compare
ABIE40_RS19130 -4.3 -3.0 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABIE40_RS02320 -4.2 -5.0 aspartate aminotransferase family protein compare
ABIE40_RS16070 -4.2 -4.1 5-(carboxyamino)imidazole ribonucleotide synthase compare
ABIE40_RS14985 -4.2 -2.8 glycosyltransferase compare
ABIE40_RS09095 -4.1 -5.6 PAS domain-containing sensor histidine kinase compare
ABIE40_RS08005 -4.1 -2.8 dihydroxy-acid dehydratase compare
ABIE40_RS20455 -4.1 -2.4 precorrin-8X methylmutase compare
ABIE40_RS03405 -4.1 -2.8 anti-sigma factor compare
ABIE40_RS11095 -4.0 -3.9 adenosylcobinamide-phosphate synthase CbiB compare
ABIE40_RS19445 -4.0 -2.8 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABIE40_RS20460 -4.0 -3.9 precorrin-3B synthase compare
ABIE40_RS20430 -4.0 -2.8 precorrin-4 C(11)-methyltransferase compare
ABIE40_RS12135 -4.0 -2.8 methionine synthase compare
ABIE40_RS17650 -4.0 -6.1 cobaltochelatase subunit CobS compare
ABIE40_RS12925 -3.9 -13.7 pyridoxal phosphate-dependent aminotransferase compare
ABIE40_RS01970 -3.9 -3.9 acetylglutamate kinase compare
ABIE40_RS17565 -3.9 -3.1 ABC transporter permease compare
ABIE40_RS20465 -3.9 -2.7 precorrin-6A synthase (deacetylating) compare
ABIE40_RS06270 -3.8 -8.9 amidophosphoribosyltransferase compare
ABIE40_RS19480 -3.8 -2.6 DUF1402 family protein compare
ABIE40_RS16655 -3.8 -9.2 creatininase family protein compare
ABIE40_RS10180 -3.8 -6.2 phosphoribosylformylglycinamidine synthase subunit PurL compare
ABIE40_RS17645 -3.8 -3.7 cobaltochelatase subunit CobT compare
ABIE40_RS05660 -3.7 -4.4 response regulator transcription factor compare
ABIE40_RS19645 -3.7 -15.5 acyltransferase compare
ABIE40_RS20450 -3.7 -4.1 precorrin-2 C(20)-methyltransferase compare
ABIE40_RS08645 -3.5 -8.0 LL-diaminopimelate aminotransferase compare
ABIE40_RS10155 -3.5 -2.3 phosphoribosylformylglycinamidine synthase subunit PurQ compare
ABIE40_RS06725 -3.4 -6.9 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD compare
ABIE40_RS14940 -3.4 -13.5 acyltransferase compare
ABIE40_RS05670 -3.3 -6.1 membrane protein compare
ABIE40_RS17590 -3.3 -3.1 prephenate/arogenate dehydrogenase family protein compare
ABIE40_RS10345 -3.1 -6.8 RNA polymerase-binding protein DksA compare
ABIE40_RS00580 -3.1 -3.4 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
ABIE40_RS04820 -3.1 -2.9 TetR family transcriptional regulator compare
ABIE40_RS20445 -3.1 -1.5 precorrin-3B C(17)-methyltransferase compare
ABIE40_RS04215 -3.1 -2.2 sensor domain-containing phosphodiesterase compare
ABIE40_RS00935 -3.1 -7.1 ABC transporter substrate-binding protein compare
ABIE40_RS06050 -3.1 -6.6 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
ABIE40_RS08935 -3.1 -3.8 RIP metalloprotease RseP compare
ABIE40_RS15345 -3.1 -9.3 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABIE40_RS10390 -3.1 -2.9 2Fe-2S iron-sulfur cluster-binding protein compare
ABIE40_RS19365 -3.0 -3.6 double-strand break repair protein AddB compare
ABIE40_RS00625 -3.0 -11.4 ABC transporter permease compare
ABIE40_RS05430 -3.0 -4.0 phosphoribosylamine--glycine ligase compare
ABIE40_RS09090 -2.9 -8.8 nitrogen regulation protein NR(I) compare
ABIE40_RS19360 -2.9 -4.4 double-strand break repair helicase AddA compare
ABIE40_RS00630 -2.9 -11.1 ABC transporter ATP-binding protein compare
ABIE40_RS06720 -2.9 -2.7 transcriptional regulator NrdR compare
ABIE40_RS26335 -2.8 -7.2 sigma-54 dependent transcriptional regulator compare
ABIE40_RS15855 -2.7 -2.4 cell division protein ZapA compare
ABIE40_RS05155 -2.7 -5.2 DUF5330 domain-containing protein compare
ABIE40_RS19455 -2.7 -1.9 DUF2628 domain-containing protein compare
ABIE40_RS05665 -2.7 -4.2 HAMP domain-containing sensor histidine kinase compare
ABIE40_RS00930 -2.6 -8.2 ABC transporter permease compare
ABIE40_RS12845 -2.6 -3.7 glycosyltransferase family 4 protein compare
ABIE40_RS09720 -2.6 -4.5 GTP cyclohydrolase I FolE compare
ABIE40_RS15010 -2.6 -9.7 metallophosphoesterase compare
ABIE40_RS04770 -2.6 -7.0 TetR/AcrR family transcriptional regulator compare
ABIE40_RS09540 -2.6 -6.5 peptidylprolyl isomerase compare
ABIE40_RS11910 -2.5 -7.6 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
ABIE40_RS15890 -2.5 -6.8 fructose bisphosphate aldolase compare
ABIE40_RS09425 -2.5 -6.1 peptidylprolyl isomerase compare
ABIE40_RS00725 -2.5 -5.4 DNA cytosine methyltransferase compare
ABIE40_RS09140 -2.5 -7.4 siroheme synthase CysG compare
ABIE40_RS10200 -2.5 -2.2 Grx4 family monothiol glutaredoxin compare
ABIE40_RS08980 -2.5 -5.8 transcriptional repressor LexA compare
ABIE40_RS18880 -2.5 -11.5 UDP-glucose 4-epimerase GalE compare
ABIE40_RS16390 -2.4 -1.4 hypothetical protein compare
ABIE40_RS00620 -2.4 -8.8 microcin C ABC transporter permease YejB compare
ABIE40_RS01930 -2.4 -1.6 succinyl-diaminopimelate desuccinylase compare
ABIE40_RS08635 -2.3 -10.6 class I poly(R)-hydroxyalkanoic acid synthase compare
ABIE40_RS07105 -2.3 -3.5 DNA-binding protein HupB compare
ABIE40_RS14955 -2.3 -9.0 sugar transferase compare
ABIE40_RS06775 -2.3 -2.6 DUF177 domain-containing protein compare
ABIE40_RS01860 -2.3 -9.7 RNA polymerase factor sigma-54 compare
ABIE40_RS08970 -2.3 -7.9 citrate synthase compare
ABIE40_RS14855 -2.2 -6.6 NAD-dependent epimerase compare
ABIE40_RS10425 -2.1 -6.7 ABC transporter ATP-binding protein compare
ABIE40_RS27250 -2.1 -2.0 hypothetical protein compare
ABIE40_RS19260 -2.1 -3.1 DNA polymerase III subunit epsilon compare
ABIE40_RS18640 -2.1 -7.8 M48 family metalloprotease compare
ABIE40_RS15920 -2.0 -1.0 50S ribosomal protein L31 compare
ABIE40_RS26345 -2.0 -10.5 dicarboxylate/amino acid:cation symporter compare
ABIE40_RS04470 -2.0 -12.1 sulfate adenylyltransferase subunit CysD compare
ABIE40_RS03485 -2.0 -12.0 MAPEG family protein compare
ABIE40_RS09320 -2.0 -11.0 extracellular solute-binding protein compare
ABIE40_RS12360 -2.0 -9.3 DUF5131 family protein compare
ABIE40_RS01055 -1.9 -5.5 translation elongation factor 4 compare
ABIE40_RS27110 -1.9 -3.4 helix-turn-helix transcriptional regulator compare
ABIE40_RS04465 -1.9 -10.6 sulfate adenylyltransferase subunit CysN compare
ABIE40_RS18055 -1.9 -4.0 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
ABIE40_RS04475 -1.9 -9.7 phosphoadenylyl-sulfate reductase compare
ABIE40_RS29110 -1.9 -2.1 GFA family protein compare
ABIE40_RS18970 -1.9 -2.6 murein hydrolase activator EnvC compare
ABIE40_RS11605 -1.9 -8.6 AsmA-like C-terminal region-containing protein compare
ABIE40_RS08140 -1.9 -10.2 vitamin B12-dependent ribonucleotide reductase compare
ABIE40_RS17560 -1.9 -4.9 cell division ATP-binding protein FtsE compare
ABIE40_RS17450 -1.8 -9.5 YqaA family protein compare
ABIE40_RS19100 -1.8 -8.1 lytic transglycosylase domain-containing protein compare
ABIE40_RS20370 -1.8 -2.2 type II toxin-antitoxin system Phd/YefM family antitoxin compare
ABIE40_RS28815 -1.8 -5.4 GNAT family N-acetyltransferase compare
ABIE40_RS12855 -1.7 -7.2 glycosyltransferase family 2 protein compare
ABIE40_RS22300 -1.7 -4.4 superoxide dismutase compare
ABIE40_RS01765 -1.6 -4.0 [protein-PII] uridylyltransferase compare
ABIE40_RS10140 -1.6 -2.6 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABIE40_RS10430 -1.6 -9.7 MlaE family lipid ABC transporter permease subunit compare
ABIE40_RS01680 -1.6 -8.5 helix-turn-helix domain-containing protein compare
ABIE40_RS18720 -1.6 -1.7 polyprenyl synthetase family protein compare
ABIE40_RS21750 -1.6 -2.1 hypothetical protein compare
ABIE40_RS06275 -1.6 -3.8 CvpA family protein compare
ABIE40_RS03815 -1.6 -1.6 DUF6101 family protein compare
ABIE40_RS00370 -1.6 -2.4 type II toxin-antitoxin system HicA family toxin compare
ABIE40_RS19245 -1.5 -3.6 Maf-like protein compare
ABIE40_RS17515 -1.5 -4.7 TlpA disulfide reductase family protein compare
ABIE40_RS02580 -1.5 -10.6 acyl-CoA dehydrogenase C-terminal domain-containing protein compare
ABIE40_RS13370 -1.5 -7.9 CDF family cation efflux transporter EmfA compare
ABIE40_RS18800 -1.5 -8.3 glucoamylase family protein compare
ABIE40_RS17000 -1.5 -4.2 ABC transporter ATP-binding protein compare
ABIE40_RS19385 -1.5 -5.4 adenosylhomocysteinase compare
ABIE40_RS16570 -1.5 -2.0 tetratricopeptide repeat protein compare
ABIE40_RS09145 -1.4 -3.3 DUF2849 domain-containing protein compare
ABIE40_RS16170 -1.4 -1.7 DUF882 domain-containing protein compare
ABIE40_RS02345 -1.4 -2.2 2'-deoxycytidine 5'-triphosphate deaminase compare
ABIE40_RS10415 -1.4 -5.0 ABC-type transport auxiliary lipoprotein family protein compare
ABIE40_RS05165 -1.4 -4.1 peptidoglycan-binding protein compare
ABIE40_RS18690 -1.4 -6.0 acetyl-CoA C-acetyltransferase compare
ABIE40_RS30225 -1.4 -2.8 hypothetical protein compare
ABIE40_RS06135 -1.4 -2.5 tyrosine phosphatase family protein compare
ABIE40_RS26865 -1.4 -2.1 hypothetical protein compare
ABIE40_RS01355 -1.4 -7.4 phospholipid N-methyltransferase PmtA compare
ABIE40_RS10420 -1.4 -5.4 MCE family protein compare
ABIE40_RS14850 -1.4 -6.5 UDP-glucose/GDP-mannose dehydrogenase family protein compare
ABIE40_RS24995 -1.4 -2.5 hypothetical protein compare
ABIE40_RS09085 -1.4 -3.8 nitrogen regulation protein NR(II) compare
ABIE40_RS15730 -1.4 -3.1 crossover junction endodeoxyribonuclease RuvC compare
ABIE40_RS10515 -1.3 -5.7 glutathione-disulfide reductase compare
ABIE40_RS00925 -1.3 -3.1 ABC transporter permease compare
ABIE40_RS15745 -1.3 -4.0 Holliday junction branch migration protein RuvA compare
ABIE40_RS07475 -1.3 -2.0 NADH:ubiquinone oxidoreductase subunit NDUFA12 compare
ABIE40_RS05545 -1.3 -1.9 Dabb family protein compare
ABIE40_RS13635 -1.3 -9.3 peptide antibiotic transporter SbmA compare
ABIE40_RS20635 -1.3 -2.7 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD compare
ABIE40_RS10850 -1.3 -3.3 excinuclease ABC subunit UvrB compare
ABIE40_RS09510 -1.3 -7.3 septal ring lytic transglycosylase RlpA family protein compare
ABIE40_RS15620 -1.3 -3.3 tol-pal system-associated acyl-CoA thioesterase compare
ABIE40_RS13005 -1.2 -5.2 pyrroline-5-carboxylate reductase compare
ABIE40_RS18735 -1.2 -4.5 TetR/AcrR family transcriptional regulator compare
ABIE40_RS23000 -1.2 -2.3 TetR/AcrR family transcriptional regulator compare
ABIE40_RS22100 -1.2 -1.1 helix-turn-helix domain-containing protein compare
ABIE40_RS00490 -1.2 -6.3 DNA polymerase I compare


Specific Phenotypes

None in this experiment

For Rhizobium sp. OAE497 in carbon source experiments

For carbon source Carnitine Hydrochloride across organisms