Experiment set1IT063 for Serratia liquefaciens MT49

Compare to:

Cobalt chloride hexahydrate 80 uM, aerobic

200 most detrimental genes:

  gene name fitness t score description  
IAI46_01120 +1.8 10.1 NAD(P)H-flavin reductase compare
IAI46_13970 +1.4 3.9 type I DNA topoisomerase compare
IAI46_00700 +1.3 9.3 class I adenylate cyclase compare
IAI46_17665 +1.3 2.3 NADH-quinone oxidoreductase subunit NuoK compare
IAI46_11185 +1.3 4.4 pyruvate kinase PykF compare
IAI46_04965 +1.2 7.7 protoheme IX farnesyltransferase compare
IAI46_04980 +1.1 9.2 cytochrome o ubiquinol oxidase subunit I compare
IAI46_04935 +1.1 2.4 exodeoxyribonuclease VII small subunit compare
IAI46_04985 +1.1 7.2 cytochrome o ubiquinol oxidase subunit II compare
IAI46_04975 +1.0 6.3 cytochrome o ubiquinol oxidase subunit III compare
IAI46_15005 +1.0 3.5 hypothetical protein compare
IAI46_04970 +1.0 4.6 cytochrome o ubiquinol oxidase subunit IV compare
IAI46_19915 +1.0 2.0 DUF1289 domain-containing protein compare
IAI46_11400 +1.0 2.1 DUF3811 domain-containing protein compare
IAI46_06130 +1.0 3.5 LexA regulated protein compare
IAI46_22240 +1.0 6.9 DedA family protein compare
IAI46_02265 +0.9 1.8 2-iminobutanoate/2-iminopropanoate deaminase compare
IAI46_17700 +0.9 4.5 NADH-quinone oxidoreductase subunit C/D compare
IAI46_17705 +0.9 3.9 NADH-quinone oxidoreductase subunit B compare
IAI46_22235 +0.9 4.7 hypothetical protein compare
IAI46_00570 +0.9 4.2 exopolyphosphatase compare
IAI46_01780 +0.8 4.5 gamma-glutamylcyclotransferase compare
IAI46_24465 +0.8 3.0 HTH-type transcriptional repressor FabR compare
IAI46_23010 +0.8 4.5 diacylglycerol kinase compare
IAI46_14560 +0.8 2.0 multidrug/spermidine efflux SMR transporter subunit MdtI compare
IAI46_22310 +0.8 3.8 DnaA initiator-associating protein DiaA compare
IAI46_17755 +0.8 3.0 phosphate acetyltransferase compare
IAI46_02885 +0.8 2.0 DUF1328 domain-containing protein compare
IAI46_17655 +0.7 3.4 NADH-quinone oxidoreductase subunit M compare
IAI46_13335 +0.7 1.8 FMN-dependent NADH-azoreductase compare
IAI46_15900 +0.7 1.6 flagellar type III secretion system protein FliR compare
IAI46_13995 +0.7 2.5 23S rRNA pseudouridine(2605) synthase RluB compare
IAI46_11725 +0.7 2.8 GNAT family N-acetyltransferase compare
IAI46_08895 +0.7 3.0 YccF domain-containing protein compare
IAI46_17650 +0.7 3.1 NADH-quinone oxidoreductase subunit NuoN compare
IAI46_08350 +0.7 2.0 glutaredoxin, GrxA family compare
IAI46_17385 +0.7 1.7 tRNA-Ser compare
IAI46_06285 +0.7 1.3 ADP-forming succinate--CoA ligase subunit beta compare
IAI46_06040 +0.7 2.9 tRNA-Met compare
IAI46_02435 +0.7 2.3 hypothetical protein compare
IAI46_09075 +0.7 1.5 hypothetical protein compare
IAI46_06255 +0.7 2.5 succinate dehydrogenase cytochrome b556 subunit compare
IAI46_22295 +0.7 2.8 16S rRNA (cytidine(1402)-2'-O)-methyltransferase compare
IAI46_09200 +0.6 2.2 DUF2594 family protein compare
IAI46_13550 +0.6 2.9 peroxidase-related enzyme compare
IAI46_04960 +0.6 4.7 MFS transporter compare
IAI46_08005 +0.6 3.0 GalU regulator GalF compare
IAI46_19820 +0.6 2.0 N-acetyltransferase compare
IAI46_11795 +0.6 1.6 xanthine dehydrogenase accessory protein XdhC compare
IAI46_06005 +0.6 3.9 CNNM family magnesium/cobalt transport protein CorC compare
IAI46_22775 +0.6 3.9 tRNA dihydrouridine synthase DusB compare
IAI46_11240 +0.6 2.9 HTH-type transcriptional repressor PurR compare
IAI46_18365 +0.6 2.4 enterochelin esterase compare
IAI46_06185 +0.6 2.2 K(+)-transporting ATPase subunit F compare
IAI46_22315 +0.6 2.1 divisome-associated lipoprotein YraP compare
IAI46_18590 +0.6 2.4 hypothetical protein compare
IAI46_17660 +0.6 1.8 NADH-quinone oxidoreductase subunit L compare
IAI46_11255 +0.6 1.9 C40 family peptidase compare
IAI46_10165 +0.6 1.7 universal stress protein compare
IAI46_17680 +0.6 1.0 NADH-quinone oxidoreductase subunit NuoH compare
IAI46_15595 +0.6 2.1 winged helix-turn-helix domain-containing protein compare
IAI46_06735 +0.6 1.7 LuxR family transcriptional regulator compare
IAI46_11510 +0.6 2.2 arabinose ABC transporter substrate-binding protein compare
IAI46_13125 +0.6 1.8 SRPBCC family protein compare
IAI46_11920 +0.6 2.1 chromate transporter compare
IAI46_15395 +0.5 2.5 ABC transporter permease compare
IAI46_11380 +0.5 1.3 pyridoxal kinase PdxY compare
IAI46_13435 +0.5 2.2 hypothetical protein compare
IAI46_12055 +0.5 1.6 hypothetical protein compare
IAI46_21275 +0.5 1.9 hypoxanthine phosphoribosyltransferase compare
IAI46_09995 +0.5 1.0 DNA polymerase III subunit theta compare
IAI46_10385 +0.5 1.7 cupin domain-containing protein compare
IAI46_13440 +0.5 1.2 hypothetical protein compare
IAI46_17230 +0.5 3.5 PTS fructose transporter subunit IIBC compare
IAI46_10215 +0.5 1.4 helix-turn-helix transcriptional regulator compare
IAI46_19330 +0.5 2.1 ISC system 2Fe-2S type ferredoxin compare
IAI46_12300 +0.5 2.4 ABC transporter ATP-binding protein compare
IAI46_12450 +0.5 1.4 SDR family oxidoreductase compare
IAI46_14850 +0.5 1.1 DUF2627 domain-containing protein compare
IAI46_17685 +0.5 2.9 NADH-quinone oxidoreductase subunit NuoG compare
IAI46_05115 +0.5 2.0 MGMT family protein compare
IAI46_11955 +0.5 2.4 LacI family DNA-binding transcriptional regulator compare
IAI46_12525 +0.5 1.6 respiratory chain complex I subunit 1 family protein compare
IAI46_15150 +0.5 1.4 hypothetical protein compare
IAI46_02445 +0.5 1.8 hypothetical protein compare
IAI46_13960 +0.5 1.5 hypothetical protein compare
IAI46_17780 +0.5 2.5 TIGR01777 family protein compare
IAI46_10450 +0.5 1.7 hypothetical protein compare
IAI46_04915 +0.5 1.2 phosphatidylglycerophosphatase A compare
IAI46_13120 +0.5 1.3 helix-turn-helix transcriptional regulator compare
IAI46_16035 +0.5 2.0 chemotaxis protein CheW compare
IAI46_16920 +0.5 1.4 SDR family oxidoreductase compare
IAI46_23205 +0.5 0.9 5S ribosomal RNA compare
IAI46_01520 +0.5 0.8 entericidin A/B family lipoprotein compare
IAI46_11220 +0.5 1.3 peptidase inhibitor I78 family protein compare
IAI46_19350 +0.5 2.1 Fe-S cluster assembly scaffold IscU compare
IAI46_09485 +0.5 1.5 hypothetical protein compare
IAI46_17085 +0.5 3.0 branched-chain amino acid ABC transporter substrate-binding protein compare
IAI46_10655 +0.5 1.1 hydrolase compare
IAI46_12270 +0.5 1.5 ABC transporter substrate-binding protein compare
IAI46_02930 +0.5 2.1 transcriptional regulator compare
IAI46_09080 +0.5 1.2 cell envelope integrity protein TolA compare
IAI46_19835 +0.5 2.3 MbeD/MobD like protein compare
IAI46_16375 +0.5 1.9 2,3-dehydroadipyl-CoA hydratase compare
IAI46_17710 +0.5 1.4 NADH-quinone oxidoreductase subunit A compare
IAI46_18785 +0.5 1.9 glycine cleavage system transcriptional repressor compare
IAI46_19970 +0.5 2.4 LysR family transcriptional regulator compare
IAI46_13885 +0.5 1.5 glycyl-radical enzyme activating protein compare
IAI46_12760 +0.5 2.1 DMT family transporter compare
IAI46_02050 +0.5 1.8 YhbP family protein compare
IAI46_12095 +0.5 2.0 LLM class flavin-dependent oxidoreductase compare
IAI46_05935 +0.5 1.3 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
IAI46_06650 +0.5 2.0 tRNA dihydrouridine(16) synthase DusC compare
IAI46_07500 +0.5 0.9 DUF1471 domain-containing protein compare
IAI46_10025 +0.5 1.3 DUF4377 domain-containing protein compare
IAI46_05340 +0.5 2.5 SDR family oxidoreductase compare
IAI46_11540 +0.5 2.0 adenosine deaminase compare
IAI46_22135 +0.5 1.0 G/U mismatch-specific DNA glycosylase compare
IAI46_17490 +0.5 2.7 SDR family oxidoreductase compare
IAI46_14110 +0.5 1.9 epoxyqueuosine reductase QueH compare
IAI46_12610 +0.5 1.5 alpha/beta hydrolase compare
IAI46_13075 +0.5 1.9 KUP/HAK/KT family potassium transporter compare
IAI46_13155 +0.5 1.9 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
IAI46_04365 +0.5 3.2 NADH:ubiquinone reductase (Na(+)-transporting) subunit B compare
IAI46_20495 +0.5 2.5 HTH-type transcriptional regulator GalR compare
IAI46_09425 +0.5 1.6 hypothetical protein compare
IAI46_13800 +0.5 1.5 hypothetical protein compare
IAI46_12035 +0.4 2.3 D,D-dipeptide ABC transporter permease compare
IAI46_09885 +0.4 1.3 YcfL family protein compare
IAI46_15920 +0.4 2.3 flagellar assembly peptidoglycan hydrolase FlgJ compare
IAI46_19340 +0.4 3.3 co-chaperone HscB compare
IAI46_12560 +0.4 0.9 hydrogenase formation protein HypD compare
IAI46_07270 +0.4 2.2 GNAT family N-acetyltransferase compare
IAI46_13795 +0.4 1.6 stationary-phase-induced ribosome-associated protein compare
IAI46_06315 +0.4 1.4 tol-pal system-associated acyl-CoA thioesterase compare
IAI46_04370 +0.4 3.0 Na(+)-translocating NADH-quinone reductase subunit C compare
IAI46_11610 +0.4 1.4 LysR family transcriptional regulator compare
IAI46_07795 +0.4 2.3 ATP-binding protein compare
IAI46_12765 +0.4 1.5 cytochrome c compare
IAI46_03905 +0.4 2.9 HlyC/CorC family transporter compare
IAI46_16215 +0.4 1.9 DUF3307 domain-containing protein compare
IAI46_17555 +0.4 1.5 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase compare
IAI46_17845 +0.4 1.5 aspartate-semialdehyde dehydrogenase compare
IAI46_09805 +0.4 1.3 aminodeoxychorismate lyase compare
IAI46_14880 +0.4 1.1 fosfomycin resistance glutathione transferase compare
IAI46_11320 +0.4 1.1 superoxide dismutase family protein compare
IAI46_12650 +0.4 2.2 TonB-dependent copper receptor compare
IAI46_05515 +0.4 1.1 fimbrial protein compare
IAI46_17270 +0.4 3.3 tryptophan permease compare
IAI46_11580 +0.4 1.8 DeoR/GlpR transcriptional regulator compare
IAI46_09100 +0.4 1.3 enoyl-CoA hydratase/isomerase family protein compare
IAI46_11765 +0.4 1.2 sugar ABC transporter permease compare
IAI46_20075 +0.4 1.6 methionine ABC transporter ATP-binding protein MetN compare
IAI46_01655 +0.4 2.2 nitric oxide-sensing transcriptional repressor NsrR compare
IAI46_08060 +0.4 0.8 glycosyltransferase family 4 protein compare
IAI46_11840 +0.4 1.2 (2Fe-2S)-binding protein compare
IAI46_16870 +0.4 1.7 alkylhydroperoxidase domain protein compare
IAI46_09545 +0.4 1.8 hypothetical protein compare
IAI46_15100 +0.4 1.6 hypothetical protein compare
IAI46_10500 +0.4 1.0 hypothetical protein compare
IAI46_12515 +0.4 0.9 4Fe-4S dicluster domain-containing protein compare
IAI46_01330 +0.4 2.6 NAD(+) diphosphatase compare
IAI46_15965 +0.4 1.7 flagellar basal body P-ring formation protein FlgA compare
IAI46_07825 +0.4 1.6 molybdopterin-synthase adenylyltransferase MoeB compare
IAI46_06845 +0.4 1.2 heme-binding protein compare
IAI46_05905 +0.4 0.8 lipoyl(octanoyl) transferase LipB compare
IAI46_14570 +0.4 1.3 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
IAI46_09115 +0.4 1.9 acetyl-CoA C-acyltransferase compare
IAI46_06985 +0.4 1.9 HNH nuclease family protein compare
IAI46_02890 +0.4 0.9 stress-response protein compare
IAI46_13870 +0.4 1.9 exoribonuclease II compare
IAI46_17130 +0.4 1.5 helix-turn-helix transcriptional regulator compare
IAI46_17670 +0.4 1.1 NADH-quinone oxidoreductase subunit J compare
IAI46_15020 +0.4 1.3 hypothetical protein compare
IAI46_18615 +0.4 2.4 LysR family transcriptional regulator compare
IAI46_09165 +0.4 1.2 FAD-dependent oxidoreductase compare
IAI46_11020 +0.4 1.7 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase compare
IAI46_17595 +0.4 1.4 DUF1097 domain-containing protein compare
IAI46_21730 +0.4 1.9 DedA family protein compare
IAI46_11075 +0.4 2.1 iron ABC transporter permease compare
IAI46_24655 +0.4 2.6 cell-envelope stress modulator CpxP compare
IAI46_22260 +0.4 1.3 phage holin family protein compare
IAI46_14035 +0.4 1.6 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF compare
IAI46_13040 +0.4 1.1 AraC family transcriptional regulator compare
IAI46_14585 +0.4 2.0 pyruvate kinase compare
IAI46_06495 +0.4 2.1 molybdenum ABC transporter ATP-binding protein ModC compare
IAI46_01220 +0.4 1.2 tRNA-Thr compare
IAI46_05695 +0.4 1.4 toxin compare
IAI46_03305 +0.4 1.0 thiamine ABC transporter ATP-binding protein ThiQ compare
IAI46_04200 +0.4 2.6 IucA/IucC family siderophore biosynthesis protein compare
IAI46_10455 +0.4 1.1 23S rRNA pseudouridine(2457) synthase RluE compare
IAI46_22450 +0.4 1.2 3-deoxy-manno-octulosonate-8-phosphatase KdsC compare
IAI46_11860 +0.4 1.5 HlyD family efflux transporter periplasmic adaptor subunit compare
IAI46_09195 +0.4 2.4 GlpM family protein compare
IAI46_16875 +0.4 1.0 putative FMN-dependent luciferase-like monooxygenase compare
IAI46_24255 +0.4 3.0 response regulator compare
IAI46_07805 +0.4 2.1 carbonic anhydrase compare
IAI46_13110 +0.4 1.4 L-2-amino-thiazoline-4-carboxylic acid hydrolase compare
IAI46_02605 +0.4 0.8 biopolymer transporter ExbD compare
IAI46_11720 +0.4 1.1 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG compare


Specific Phenotypes

None in this experiment

For Serratia liquefaciens MT49 in stress experiments

For stress Cobalt chloride hexahydrate across organisms