Experiment set1H44 for Shewanella amazonensis SB2B

200 most detrimental genes:

gene	name	fitness	t score	description
Sama_R0116		+1.2	1.3	tRNA-Leu (RefSeq)
Sama_1518		+0.9	3.0	hypothetical protein (RefSeq)
Sama_R0128		+0.9	2.6	tRNA-Gly (RefSeq)
Sama_2023		+0.9	2.5	hypothetical protein (RefSeq)
Sama_1611		+0.9	1.5	HU family DNA-binding protein (RefSeq)
Sama_1466		+0.8	2.7	hypothetical protein (RefSeq)
Sama_2069		+0.8	1.1	MarR family transcriptional regulator (RefSeq)
Sama_1479		+0.8	1.4	hypothetical protein (RefSeq)
Sama_1965		+0.7	0.9	hypothetical protein (RefSeq)
Sama_1857		+0.7	2.5	thiamine biosynthesis protein ThiS (RefSeq)
Sama_1950		+0.7	1.1	lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (RefSeq)
Sama_1179		+0.7	2.1	hypothetical protein (RefSeq)
Sama_1492		+0.7	2.2	hypothetical protein (RefSeq)
Sama_3402		+0.7	2.1	D-tyrosyl-tRNA(Tyr) deacylase (RefSeq)
Sama_1745		+0.6	1.6	hypothetical protein (RefSeq)
Sama_3450		+0.6	2.3	hypothetical protein (RefSeq)
Sama_2581		+0.6	1.6	hypothetical protein (RefSeq)
Sama_1407		+0.6	1.9	ACT domain-containing protein (RefSeq)
Sama_3168		+0.6	1.6	hypothetical protein (RefSeq)
Sama_2943		+0.6	3.0	hypothetical protein (RefSeq)
Sama_1929		+0.6	1.9	hypothetical protein (RefSeq)
Sama_0411		+0.6	1.9	hypothetical protein (RefSeq)
Sama_3333		+0.6	1.4	hypothetical protein (RefSeq)
Sama_1343		+0.6	1.4	hypothetical protein (RefSeq)
Sama_0838		+0.6	1.4	hypothetical protein (RefSeq)
Sama_1933		+0.6	2.2	ribonuclease D (RefSeq)
Sama_1346		+0.6	1.5	hypothetical protein (RefSeq)
Sama_1945	hisH	+0.6	1.6	imidazole glycerol phosphate synthase subunit HisH (RefSeq)
Sama_2690		+0.6	1.2	MarR family transcriptional regulator (RefSeq)
Sama_1654		+0.6	1.8	hypothetical protein (RefSeq)
Sama_3104		+0.6	1.5	hypothetical protein (RefSeq)
Sama_3473		+0.5	1.7	hypothetical protein (RefSeq)
Sama_1034	mazG	+0.5	2.5	nucleoside triphosphate pyrophosphohydrolase (RefSeq)
Sama_1594		+0.5	0.8	hypothetical protein (RefSeq)
Sama_1522		+0.5	1.2	small component of lactate uptake system (from data)
Sama_2711		+0.5	2.7	hypothetical protein (RefSeq)
Sama_1525		+0.5	1.9	DNA polymerase III epsilon subunit-related 3'-5' exonuclease-like protein (RefSeq)
Sama_2279		+0.5	1.8	response regulator receiver protein (RefSeq)
Sama_1085		+0.5	1.9	hypothetical protein (RefSeq)
Sama_2670		+0.5	1.3	hypothetical protein (RefSeq)
Sama_1742		+0.5	1.8	hypothetical protein (RefSeq)
Sama_1367		+0.5	2.4	short chain dehydrogenase/reductase family oxidoreductase (RefSeq)
Sama_2188		+0.5	1.5	rhodanese-like protein (RefSeq)
Sama_1714		+0.5	1.7	no description
Sama_2276		+0.5	0.8	chemotaxis-specific methylesterase (RefSeq)
Sama_2888		+0.5	0.5	adenylylsulfate kinase (RefSeq)
Sama_1352		+0.5	1.0	hypothetical protein (RefSeq)
Sama_2034		+0.5	1.3	methyltransferase (RefSeq)
Sama_0683		+0.5	1.8	hypothetical protein (RefSeq)
Sama_1856	thiG	+0.5	2.1	thiazole synthase (RefSeq)
Sama_0749		+0.5	1.4	hypothetical protein (RefSeq)
Sama_0869		+0.5	1.3	hypothetical protein (RefSeq)
Sama_0989		+0.5	1.5	warning TorE protein (RefSeq)
Sama_0978		+0.5	2.8	phosphoserine phosphatase (RefSeq)
Sama_0465		+0.5	1.5	MSHA biogenesis protein MshP (RefSeq)
Sama_1663		+0.5	0.8	glucose/galactose transporter (RefSeq)
Sama_2221	phhB	+0.5	1.3	pterin-4-alpha-carbinolamine dehydratase (RefSeq)
Sama_1652		+0.5	1.1	hypothetical protein (RefSeq)
Sama_2061		+0.5	1.5	MutT/nudix family protein (RefSeq)
Sama_0819		+0.4	2.5	hypothetical protein (RefSeq)
Sama_2301		+0.4	2.4	response regulator receiver protein (RefSeq)
Sama_3296		+0.4	1.5	aconitate hydratase (RefSeq)
Sama_0360		+0.4	1.1	hypothetical protein (RefSeq)
Sama_1785		+0.4	1.4	MerR family transcriptional regulator (RefSeq)
Sama_1373		+0.4	1.1	hypothetical protein (RefSeq)
Sama_0769		+0.4	2.3	UDP-N-acetylmuramate (RefSeq)
Sama_2226		+0.4	1.5	hypothetical protein (RefSeq)
Sama_2575		+0.4	1.9	tRNA-i(6)A37 modification enzyme MiaB (RefSeq)
Sama_2230		+0.4	2.2	hypothetical protein (RefSeq)
Sama_1887		+0.4	2.3	AsmA protein (RefSeq)
Sama_2190	secF	+0.4	1.0	preprotein translocase subunit SecF (RefSeq)
Sama_1043		+0.4	1.9	lipoprotein NlpD (RefSeq)
Sama_2225		+0.4	0.9	ferredoxin-type protein NapF (RefSeq)
Sama_1124		+0.4	1.2	hypothetical protein (RefSeq)
Sama_0818		+0.4	1.5	hypothetical protein (RefSeq)
Sama_1721		+0.4	1.0	hypothetical protein (RefSeq)
Sama_1308		+0.4	1.3	hypothetical protein (RefSeq)
Sama_3123		+0.4	1.9	hypothetical protein (RefSeq)
Sama_0828		+0.4	1.0	putative glycerol-3-phosphate acyltransferase PlsY (RefSeq)
Sama_2446		+0.4	1.7	cobalamin synthesis protein/P47K family protein (RefSeq)
Sama_0528		+0.4	2.2	cytochrome c family protein (RefSeq)
Sama_3212		+0.4	2.7	hypothetical protein (RefSeq)
Sama_1348		+0.4	0.7	hypothetical protein (RefSeq)
Sama_1562		+0.4	1.1	ferrichrome-binding protein (RefSeq)
Sama_1536		+0.4	1.4	hypothetical protein (RefSeq)
Sama_3578		+0.4	1.8	hypothetical protein (RefSeq)
Sama_1112		+0.4	1.8	omega-3 polyunsaturated fatty acid synthase PfaD (RefSeq)
Sama_2040		+0.4	1.8	TatD family hydrolase (RefSeq)
Sama_2434		+0.4	1.1	exodeoxyribonuclease VII, small subunit (RefSeq)
Sama_3097		+0.4	0.7	putative transposase (RefSeq)
Sama_0678		+0.4	1.3	hypothetical protein (RefSeq)
Sama_2035		+0.4	2.4	ATP-dependent protease La (RefSeq)
Sama_1975		+0.4	1.1	2-hydroxy-3-oxopropionate reductase (RefSeq)
Sama_2344		+0.4	1.2	hypothetical protein (RefSeq)
Sama_1385		+0.4	1.1	hypothetical protein (RefSeq)
Sama_2749		+0.4	1.7	putative transcriptional regulator, CadC (RefSeq)
Sama_2626		+0.4	1.0	hypothetical protein (RefSeq)
Sama_2791		+0.4	1.4	hypothetical protein (RefSeq)
Sama_1011		+0.4	2.4	hypothetical protein (RefSeq)
Sama_1415		+0.4	2.1	beta-lactamase-like protein (RefSeq)
Sama_2180		+0.4	1.6	hypothetical protein (RefSeq)
Sama_1729		+0.4	1.6	phosphoglycolate phosphatase (RefSeq)
Sama_1244		+0.3	1.2	hypothetical protein (RefSeq)
Sama_1309		+0.3	1.8	adenine phosphoribosyltransferase (RefSeq)
Sama_1091		+0.3	1.5	PhnA protein (RefSeq)
Sama_0764		+0.3	1.7	cobinamide kinase/cobinamide phosphate guanylyltransferase (RefSeq)
Sama_1618		+0.3	1.6	CBS domain-containing protein (RefSeq)
Sama_1990		+0.3	1.6	sulphate transporter (RefSeq)
Sama_1960		+0.3	1.3	cold-shock DNA-binding domain-containing protein (RefSeq)
Sama_2267		+0.3	1.9	response regulator receiver protein (RefSeq)
Sama_1879		+0.3	1.7	hypothetical protein (RefSeq)
Sama_2066		+0.3	1.4	hypothetical protein (RefSeq)
Sama_1665		+0.3	1.1	hypothetical protein (RefSeq)
Sama_2198		+0.3	1.3	hypothetical protein (RefSeq)
Sama_1442		+0.3	1.7	peptidase E (RefSeq)
Sama_2138		+0.3	0.9	YciI-like protein (RefSeq)
Sama_1928		+0.3	1.8	membrane-bound lytic murein transglycosylase B (RefSeq)
Sama_2845		+0.3	1.6	hypothetical protein (RefSeq)
Sama_1886		+0.3	1.3	hypothetical protein (RefSeq)
Sama_2109		+0.3	1.3	putative lipoprotein (RefSeq)
Sama_2902		+0.3	1.8	hypothetical protein (RefSeq)
Sama_0143		+0.3	1.8	3,4-dihydroxy-2-butanone 4-phosphate synthase (RefSeq)
Sama_2775		+0.3	2.0	putative acetyltransferase (RefSeq)
Sama_1969		+0.3	1.1	ABC transporter, ATP-binding protein (RefSeq)
Sama_1612		+0.3	1.6	peptidoglycan binding domain-containing protein (RefSeq)
Sama_0741		+0.3	1.7	hemolysin-coregulated protein (uncharacterized)-like protein (RefSeq)
Sama_1475		+0.3	1.8	hypothetical protein (RefSeq)
Sama_0844		+0.3	1.5	hypothetical protein (RefSeq)
Sama_2810		+0.3	2.0	hypothetical protein (RefSeq)
Sama_2494		+0.3	1.5	cytochrome b561 (RefSeq)
Sama_2467		+0.3	1.4	hypothetical protein (RefSeq)
Sama_2166		+0.3	0.7	hypothetical protein (RefSeq)
Sama_1749		+0.3	2.1	hypothetical protein (RefSeq)
Sama_2459		+0.3	1.4	acetyltransferase (RefSeq)
Sama_3620		+0.3	2.3	hypothetical protein (RefSeq)
Sama_1400		+0.3	2.2	periplasmic binding protein/LacI transcriptional regulator (RefSeq)
Sama_1657		+0.3	2.1	major facilitator transporter (RefSeq)
Sama_2402		+0.3	1.8	tetraheme cytochrome c, putative (RefSeq)
Sama_1956		+0.3	1.4	hypothetical protein (RefSeq)
Sama_3146		+0.3	1.9	formate--tetrahydrofolate ligase (RefSeq)
Sama_1676		+0.3	1.0	hydrogenase expression/formation protein (RefSeq)
Sama_1129		+0.3	1.5	hypothetical protein (RefSeq)
Sama_1948		+0.3	1.3	bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein (RefSeq)
Sama_3638		+0.3	1.1	hypothetical protein (RefSeq)
Sama_1558		+0.3	1.1	hypothetical protein (RefSeq)
Sama_2002		+0.3	1.8	sortase (surface protein transpeptidase)-like protein (RefSeq)
Sama_1353		+0.3	1.4	hypothetical protein (RefSeq)
Sama_1103		+0.3	2.1	signal transduction histidine kinase-like protein (RefSeq)
Sama_0567		+0.3	1.3	hypothetical protein (RefSeq)
Sama_3409		+0.3	1.9	putative iron uptake protein (RefSeq)
Sama_1677		+0.3	1.8	quinone-reactive Ni/Fe hydrogenase, cytochrome b subunit (RefSeq)
Sama_0268		+0.3	2.1	hypothetical protein (RefSeq)
Sama_1283		+0.3	1.2	hypothetical protein (RefSeq)
Sama_1702		+0.3	1.0	LexA regulated protein (RefSeq)
Sama_2113		+0.3	1.4	ErfK/YbiS/YcfS/YnhG (RefSeq)
Sama_1582		+0.3	1.0	hypothetical protein (RefSeq)
Sama_2974		+0.3	1.5	putative 2'-5' RNA ligase (RefSeq)
Sama_1123		+0.3	1.0	hypothetical protein (RefSeq)
Sama_1382		+0.3	1.1	hypothetical protein (RefSeq)
Sama_0422		+0.3	2.0	hypothetical protein (RefSeq)
Sama_0609		+0.3	1.8	hypothetical protein (RefSeq)
Sama_1130		+0.3	1.2	hypothetical protein (RefSeq)
Sama_2709		+0.3	2.0	D-isomer specific 2-hydroxyacid dehydrogenase family protein (RefSeq)
Sama_2927		+0.3	1.3	holin-like protein (RefSeq)
Sama_1820		+0.3	1.2	metal-binding protein (RefSeq)
Sama_1163		+0.3	1.8	acetyltransferase (RefSeq)
Sama_1800		+0.3	1.3	universal stress protein UspE (RefSeq)
Sama_1577		+0.3	0.5	hypothetical protein (RefSeq)
Sama_R0014		+0.3	0.3	16S ribosomal RNA (RefSeq)
Sama_1734		+0.3	0.4	3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq)
Sama_1707		+0.3	1.2	protein-methionine-S-oxide reductase (RefSeq)
Sama_1491		+0.3	1.3	hypothetical protein (RefSeq)
Sama_1402		+0.3	1.9	Beta-glucosidase (RefSeq)
Sama_0262		+0.3	1.9	tRNA guanosine-2'-O-methyltransferase (RefSeq)
Sama_2667		+0.3	1.2	hypothetical protein (RefSeq)
Sama_1469		+0.3	1.6	multidrug resistance efflux pump-like protein (RefSeq)
Sama_1449		+0.3	1.3	hypothetical protein (RefSeq)
Sama_0133		+0.3	1.5	hypothetical protein (RefSeq)
Sama_1272		+0.3	1.0	hypothetical protein (RefSeq)
Sama_1288		+0.3	1.7	putative uncharacterized protein involved in response to NO (RefSeq)
Sama_2443		+0.3	1.4	hypothetical protein (RefSeq)
Sama_2295	fliH	+0.3	1.2	flagellar assembly protein H (RefSeq)
Sama_2802		+0.3	1.0	hypothetical protein (RefSeq)
Sama_3092		+0.3	1.4	phosphocarrier protein NPR (RefSeq)
Sama_1260		+0.3	1.6	response regulator receiver protein (RefSeq)
Sama_1207		+0.3	1.4	decaheme cytochrome c MtrA (RefSeq)
Sama_1459		+0.3	1.3	methyl-accepting chemotaxis protein (RefSeq)
Sama_1344		+0.3	0.8	hypothetical protein (RefSeq)
Sama_1755		+0.3	1.1	cation efflux family protein (RefSeq)
Sama_2333		+0.3	1.0	hypothetical protein (RefSeq)
Sama_1391		+0.3	1.0	putative NAD(P)H oxidoreductase (RefSeq)
Sama_3573		+0.3	1.6	ABC transporter, ATP-binding protein (RefSeq)
Sama_1565		+0.3	1.4	hypothetical protein (RefSeq)
Sama_2763		+0.2	1.2	acetyltransferase (RefSeq)
Sama_1012		+0.2	1.7	hypothetical protein (RefSeq)
Sama_2000		+0.2	1.3	hypothetical protein (RefSeq)
Sama_1384		+0.2	1.5	streptogramin A acetyl transferase (RefSeq)
Sama_2699		+0.2	1.5	response regulator receiver protein (RefSeq)
Sama_3463		+0.2	2.0	O-succinylbenzoic acid--CoA ligase (RefSeq)
Sama_0985		+0.2	1.8	sensor histidine kinase/response regulator TorS (RefSeq)

Specific Phenotypes

None in this experiment

For Shewanella amazonensis SB2B in lb experiments