Experiment set18S301 for Agrobacterium fabrum C58

Compare to:

LB_Arabidopsis_root

200 most important genes:

  gene name fitness t score description  
Atu0030 -3.3 -2.5 phosphocarrier protein HPr compare
Atu4317 -2.7 -3.1 TetR family transcriptional regulator compare
Atu0784 -2.4 -2.5 hypothetical protein compare
Atu1535 -2.4 -3.2 cytochrome c oxidase, FixQ chain compare
Atu1874 -2.3 -2.7 RecA protein compare
Atu0999 -2.2 -1.5 magnesium transport protein compare
Atu0692 -2.2 -11.2 glutathione-regulated potassium-efflux system protein compare
Atu0769 -2.2 -1.5 protoheme IX farnesyltransferase compare
Atu1803 -2.2 -5.2 cold shock protein compare
Atu2183 -2.2 -11.0 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu4614 -2.1 -9.6 glycosyltransferase compare
Atu1163 -2.1 -1.6 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0189 -2.0 -1.3 ABC transporter, membrane spanning protein (peptide) compare
Atu3353 -1.9 -10.4 mannose-1-phosphate guanylyltransferase compare
Atu4618 -1.9 -9.8 dTDP-rhamnose-3,5-epimerase compare
Atu3299 -1.9 -3.8 hypothetical protein compare
Atu4617 -1.8 -9.6 dTDP-D-glucose-4,6-dehydratase compare
Atu4615 -1.8 -9.6 glucose-1-phosphate thymidylyltransferase compare
Atu0690 -1.7 -2.0 hypothetical protein compare
Atu4897 -1.7 -2.0 hypothetical protein compare
Atu0912 -1.7 -1.6 Na+/H+ antiporter compare
Atu0876 -1.7 -1.8 superoxide dismutase compare
Atu2684 -1.7 -3.0 hypothetical protein compare
Atu8056 -1.6 -1.6 hypothetical protein compare
Atu0486 -1.6 -3.4 dihydroorotate dehydrogenase compare
Atu4166 -1.6 -3.5 UDP-glucose 4-epimerase compare
Atu3311 -1.6 -10.6 phosphomannose isomerase compare
Atu0269 -1.6 -4.3 exodeoxyribonuclease VII large subunit compare
Atu8095 -1.5 -7.1 hypothetical protein compare
Atu0050 -1.5 -2.6 two component response regulator compare
Atu0331 -1.5 -2.2 sigma-54 modulation protein compare
Atu1536 -1.5 -5.1 cytochrome C oxidase, FixO chain compare
Atu2800 -1.4 -1.9 precorrin-3B C17-methyltransferase compare
Atu1774 -1.4 -1.3 ABC transporter, substrate binding protein (peptide) compare
Atu6189 -1.4 -1.8 protein secretion chaperone compare
Atu0399 -1.4 -4.5 dihydroorotase compare
Atu4613 -1.3 -10.6 glycosyltransferase compare
Atu3727 -1.3 -4.5 hypothetical protein compare
Atu4133 -1.3 -1.9 hypothetical protein compare
Atu0141 -1.3 -0.9 cytochrome O ubiquinol oxidase subunit I compare
Atu2439 -1.3 -0.6 hypothetical protein compare
Atu1074 -1.2 -6.1 NAD/NADP dependent oxidoreductase compare
Atu0601 -1.2 -5.5 oxidoreductase compare
Atu1537 -1.2 -7.3 cytochrome-c oxidase, FixN chain compare
Atu1530 -1.2 -7.6 nitrogen fixation protein FixG compare
Atu3598 -1.2 -1.1 thiol:disulfide interchange protein compare
Atu0031 -1.2 -0.9 PTS system, IIA component compare
Atu3663 -1.1 -1.9 hypothetical protein compare
Atu3001 -1.1 -2.1 hypothetical protein compare
Atu2239 -1.1 -3.5 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu4616 -1.1 -1.4 dTDP-4-dehydrorhamnose reductase compare
Atu4205 -1.1 -4.2 TetR family transcriptional regulator compare
Atu1099 -1.1 -4.2 hypothetical protein compare
Atu0400 -1.1 -2.3 orotate phosphoribosyltransferase compare
Atu1602 -1.1 -4.3 transcriptional activator, Crp family compare
Atu0251 -1.1 -7.5 hypothetical protein compare
Atu1173 -1.1 -7.0 MFS permease compare
Atu1028 -1.1 -1.9 hypothetical protein compare
Atu1527 -1.0 -4.1 nitrogen fixation protein FixS compare
Atu0971 -1.0 -1.0 two component sensor kinase compare
Atu2237 -1.0 -3.9 cytochrome c1 compare
Atu2616 -1.0 -1.8 hypothetical protein compare
Atu1528 -1.0 -7.8 nitrogen fixation protein FixI compare
Atu2274 -1.0 -5.2 cation efflux system protein compare
Atu0036 -1.0 -1.9 hypothetical protein compare
Atu1810 -1.0 -0.7 hypothetical protein compare
Atu1739 -1.0 -2.3 permease compare
Atu0977 -1.0 -2.6 serine protease DO-like protease compare
Atu3008 -1.0 -0.9 hypothetical protein compare
Atu0190 -1.0 -0.9 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu1359 -1.0 -1.1 dnaK deletion suppressor protein compare
Atu3468 -1.0 -0.8 hypothetical protein compare
Atu1529 -1.0 -3.8 nitrogen fixation protein FixH compare
Atu0602 -1.0 -5.8 glutamine synthetase compare
Atu0641 -1.0 -2.9 hypothetical protein compare
Atu0188 -0.9 -0.6 ABC transporter, membrane spanning protein (peptide) compare
Atu0086 -0.9 -1.1 ribosome-binding factor A compare
Atu0925 -0.9 -2.5 hypothetical protein compare
Atu1447 -0.9 -1.4 two component sensor kinase compare
Atu2238 -0.9 -5.7 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu2207 -0.9 -2.6 two component sensor kinase compare
Atu0544 -0.9 -1.3 hypothetical protein compare
Atu2184 -0.9 -3.3 transcriptional regulator, AsnC family compare
Atu4540 -0.9 -2.1 protocatechuate 3,4-dioxygenase subunit beta compare
Atu3010 -0.9 -5.2 hypothetical protein compare
Atu1307 -0.9 -3.1 dihydroorotase compare
Atu8096 -0.9 -1.4 hypothetical protein compare
Atu1129 -0.9 -4.4 excinuclease ABC chain C compare
Atu0923 -0.9 -3.3 hypothetical protein compare
Atu1705 -0.9 -2.7 SEC-independent protein translocase protein compare
Atu3517 -0.9 -3.3 acetyltransferase compare
Atu2057 -0.9 -1.3 DNA helicase II compare
Atu1513 -0.9 -2.8 ABC excinuclease subunit A compare
Atu0978 -0.9 -3.1 two component response regulator compare
Atu0368 -0.9 -3.1 tRNA pseudouridine synthase I compare
Atu1364 -0.8 -2.8 ATP-dependent Clp protease, ATP-binding subunit compare
Atu3249 -0.8 -3.1 septum formation inhibitor compare
Atu8191 -0.8 -1.1 hypothetical protein compare
Atu0044 -0.8 -4.0 heat shock protein hslV compare
Atu1327 -0.8 -2.1 NADH-ubiquinone oxidoreductase compare
Atu0479 -0.8 -4.5 ABC transporter, substrate binding protein (amino acid) compare
Atu2692 -0.8 -2.6 intracellular septation protein compare
Atu4711 -0.8 -3.5 two component sensor kinase compare
Atu5164 -0.8 -0.9 type IV secretion protein AvhB3 compare
Atu1534 -0.8 -3.5 cytochrome-c oxidase, FixP chain compare
Atu0298 -0.8 -3.6 orotidine 5 compare
Atu1354 -0.8 -0.8 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu3014 -0.8 -1.9 hypothetical protein compare
Atu4893 -0.8 -3.1 hypothetical protein compare
Atu2824 -0.8 -2.0 hypothetical protein compare
Atu4407 -0.8 -1.9 periplasmic nitrate reductase, NapD protein compare
Atu2722 -0.8 -3.1 porin compare
Atu3017 -0.8 -1.1 phosphoglyceromutase compare
Atu2235 -0.8 -1.9 hypothetical protein compare
Atu2376 -0.8 -2.1 hypothetical protein compare
Atu2286 -0.8 -1.4 hypothetical protein compare
Atu4894 -0.8 -3.9 transposase compare
Atu8167 -0.7 -4.2 putative transmembrane protein compare
Atu2464 -0.7 -1.7 formyltetrahydrofolate deformylase compare
Atu0101 -0.7 -1.7 cytochrome c compare
Atu3628 -0.7 -2.5 hypothetical protein compare
Atu1308 -0.7 -2.9 aspartate carbamoyl transferase catalytic subunit compare
Atu1581 -0.7 -1.4 hypothetical protein compare
Atu1970 -0.7 -2.1 hypothetical protein compare
Atu2304 -0.7 -4.4 bacteroid development protein compare
Atu5146 -0.7 -1.7 hypothetical protein compare
Atu3647 -0.7 -1.7 hypothetical protein compare
Atu2379 -0.7 -4.5 phosphomannomutase compare
Atu8169 -0.7 -2.5 hypothetical protein compare
Atu2682 -0.7 -1.9 hypothetical protein compare
Atu4342 -0.7 -2.1 hypothetical protein compare
Atu3460 -0.7 -2.9 RhtB family transporter compare
Atu1439 -0.7 -1.1 hypothetical protein compare
Atu2267 -0.7 -3.8 hypothetical protein compare
Atu0237 -0.7 -2.8 hypothetical protein compare
Atu1204 -0.7 -3.5 potassium uptake protein compare
Atu0973 -0.7 -4.1 cycH protein compare
Atu1952 -0.7 -1.2 hypothetical protein compare
Atu0572 -0.6 -0.7 hypothetical protein compare
Atu4889 -0.6 -2.5 hypothetical protein compare
Atu2620 -0.6 -1.0 hypothetical protein compare
Atu0533 -0.6 -1.0 putative inhibitor of septum formation compare
Atu0280 -0.6 -1.7 hypothetical protein compare
Atu0135 -0.6 -1.0 uracil phosphoribosyltransferase compare
Atu3657 -0.6 -2.0 hypothetical protein compare
Atu4892 -0.6 -4.5 hypothetical protein compare
Atu3712 -0.6 -0.9 hypothetical protein compare
Atu4177 -0.6 -4.6 ATP-dependent Clp protease, ATP-binding subunit compare
Atu1147 -0.6 -2.0 hypothetical protein compare
Atu3006 -0.6 -2.5 hypothetical protein compare
Atu3121 -0.6 -0.8 cold shock protein compare
Atu5489 -0.6 -1.8 hypothetical protein compare
Atu3603 -0.6 -1.6 two component response regulator compare
Atu1836 -0.6 -1.0 hypothetical protein compare
Atu0499 -0.6 -3.2 hypothetical protein compare
Atu3015 -0.6 -3.2 hypothetical protein compare
Atu4502 -0.6 -3.1 cobalamin synthesis protein compare
Atu3604 -0.6 -1.3 hypoxanthine phosphoribosyltransferase compare
Atu3999 -0.6 -1.5 dithiobiotin synthetase compare
Atu1793 -0.6 -3.2 phosphatidylcholine synthase compare
Atu2832 -0.6 -1.9 tRNA modification GTPase compare
Atu3912 -0.6 -3.6 hypothetical protein compare
Atu8117 -0.6 -1.1 hypothetical protein compare
Atu1921 -0.6 -1.4 hypothetical protein compare
Atu3013 -0.6 -2.5 hypothetical protein compare
Atu3465 -0.6 -1.8 metallo-beta-lactamase superfamily protein compare
Atu4756 -0.6 -2.9 hypothetical protein compare
Atu4072 -0.6 -0.7 nodulation protein N compare
Atu2640 -0.6 -1.7 hypothetical protein compare
Atu2077 -0.6 -2.1 DNA polymerase III, epsilon subunit compare
Atu0635 -0.6 -1.9 hypothetical protein compare
Atu3732 -0.6 -4.0 hemolysin compare
Atu2650 -0.6 -3.1 glycerol-3-phosphate dehydrogenase compare
Atu4393 -0.6 -2.2 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
Atu3429 -0.6 -0.8 hypothetical protein compare
Atu1182 -0.6 -1.2 hypothetical protein compare
Atu0837 -0.6 -2.2 transcriptional regulator, MarR family compare
Atu1904 -0.5 -1.3 transcriptional regulator compare
Atu0153 -0.5 -2.2 transcriptional regulator, Fur family compare
Atu1601 -0.5 -3.5 oxygen-independent coproporphyrinogen III oxidase compare
Atu4040 -0.5 -1.6 hypothetical protein compare
Atu3518 -0.5 -2.5 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu1838 -0.5 -1.2 ABC transporter, substrate binding protein (amino acid) compare
Atu4888 -0.5 -2.8 hypothetical protein compare
Atu1030 -0.5 -0.5 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu3763 -0.5 -0.3 hypothetical protein compare
Atu2083 -0.5 -1.7 DNA repair protein RecN compare
Atu1677 -0.5 -1.7 queuine tRNA-ribosyltransferase compare
Atu2585 -0.5 -2.1 hypothetical protein compare
Atu3423 -0.5 -1.2 hypothetical protein compare
Atu8202 -0.5 -2.5 hypothetical protein compare
Atu4773 -0.5 -0.5 two component response regulator compare
Atu3739 -0.5 -1.7 phosphoglycerate kinase compare
Atu2808 -0.5 -2.9 cobyric acid synthase compare
Atu8052 -0.5 -0.5 hypothetical protein compare
Atu3095 -0.5 -1.3 hypothetical protein compare
Atu3009 -0.5 -0.4 exopolysaccharide production protein compare
Atu8143 -0.5 -1.3 hypothetical protein compare
Atu8041 -0.5 -1.5 hypothetical protein compare
Atu2831 -0.5 -2.0 glucose inhibited division protein A compare


Specific Phenotypes

For 1 genes in this experiment

For lb_arabidopsis_root LB_Arabidopsis_root in Agrobacterium fabrum C58

For lb_arabidopsis_root LB_Arabidopsis_root across organisms