Experiment set18S29 for Pseudomonas syringae pv. syringae B728a

Compare to:

no stress control

200 most important genes:

  gene name fitness t score description  
Psyr_5088 -4.7 -8.5 regulatory protein, LuxR:Response regulator receiver compare
Psyr_5091 -4.5 -19.8 Binding-protein-dependent transport systems inner membrane component compare
Psyr_5090 -4.1 -10.3 ABC transporter compare
Psyr_4136 -3.9 -2.6 BolA-like protein compare
Psyr_5089 -3.1 -5.6 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal compare
Psyr_1749 -2.9 -5.8 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 compare
Psyr_2900 -2.9 -5.8 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase compare
Psyr_2139 -2.5 -8.6 Kef-type potassium/proton antiporter, CPA2 family compare
Psyr_0857 -2.2 -3.5 [SSU ribosomal protein S18P]-alanine acetyltransferase compare
Psyr_3698 -2.1 -2.0 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt compare
Psyr_3020 -2.1 -1.3 precorrin-4 C11-methyltransferase compare
Psyr_3678 -2.1 -5.7 adenosylcobinamide-phosphate synthase compare
Psyr_5041 -2.0 -11.0 phosphate ABC transporter substrate-binding protein, PhoT family compare
Psyr_1762 -1.9 -8.8 conserved hypothetical protein compare
Psyr_4115 -1.8 -2.1 phosphoheptose isomerase compare
Psyr_3425 -1.8 -2.7 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp compare
Psyr_4754 -1.8 -1.2 16S rRNA m(2)G-966 methyltransferase compare
Psyr_5040 -1.8 -11.6 Binding-protein-dependent transport systems inner membrane component compare
Psyr_0493 -1.7 -2.1 CheW-like protein compare
Psyr_0033 -1.7 -2.5 tryptophan synthase, alpha chain compare
Psyr_0528 -1.6 -1.8 Carbamoyltransferase compare
Psyr_5039 -1.6 -10.3 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3193 -1.5 -1.0 Transcription factor jumonji, jmjC compare
Psyr_5034 -1.5 -6.8 CBS:Protein of unknown function DUF21:Transporter-associated region compare
Psyr_1400 -1.4 -9.6 outer membrane porin compare
Psyr_1953 -1.3 -2.7 conserved hypothetical protein compare
Psyr_4566 -1.3 -4.4 Peptidase M23B compare
Psyr_2897 -1.3 -3.9 regulatory protein, LuxR:Response regulator receiver compare
Psyr_3262 -1.3 -1.9 dnaK suppressor protein, putative compare
Psyr_0549 -1.3 -2.1 Metallophosphoesterase compare
Psyr_4842 -1.3 -5.0 Phosphoenolpyruvate-protein phosphotransferase compare
Psyr_4418 -1.3 -1.3 Precorrin-6Y C5,15-methyltransferase (decarboxylating) compare
Psyr_3674 -1.2 -1.5 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase compare
Psyr_0215 -1.2 -5.8 Exodeoxyribonuclease III xth compare
Psyr_4839 -1.2 -6.9 hypothetical protein compare
Psyr_3282 -1.2 -4.3 transcriptional regulator, TetR family compare
Psyr_1984 -1.2 -4.4 3-isopropylmalate dehydratase, small subunit compare
Psyr_1249 -1.2 -3.3 histidyl-tRNA synthetase compare
Psyr_0811 -1.2 -4.9 Integral membrane protein TerC compare
Psyr_4093 -1.2 -3.3 glutamate N-acetyltransferase compare
Psyr_1992 -1.2 -2.9 Zinc-containing alcohol dehydrogenase superfamily compare
Psyr_2253 -1.1 -2.4 Phosphonate metabolism compare
Psyr_1613 -1.1 -2.2 septum site-determining protein MinC compare
Psyr_1895 -1.1 -2.3 conserved hypothetical protein compare
Psyr_0176 -1.1 -2.7 conserved hypothetical protein compare
Psyr_3013 -1.1 -1.3 magnesium chelatase subunit ChlD compare
Psyr_3672 -1.1 -1.7 cobalamin-5'-phosphate synthase compare
Psyr_3675 -1.1 -2.2 adenosylcobinamide kinase compare
Psyr_5038 -1.1 -6.3 phosphate ABC transporter ATP-binding protein, PhoT family compare
Psyr_0293 -1.1 -5.5 Polyphosphate kinase compare
Psyr_1329 -1.0 -2.7 conserved hypothetical protein compare
Psyr_2344 -1.0 -3.2 CDS compare
Psyr_4855 -1.0 -4.5 conserved hypothetical protein compare
Psyr_4601 -1.0 -2.6 hypothetical protein compare
Psyr_0524 -1.0 -1.1 Lipopolysaccharide kinase compare
Psyr_0201 -1.0 -4.1 ATP-dependent DNA helicase RecG compare
Psyr_4920 -1.0 -1.8 conserved hypothetical bacteriophage protein compare
Psyr_3835 -1.0 -2.8 hypothetical protein compare
Psyr_3015 -1.0 -3.9 cobaltochelatase CobN subunit compare
Psyr_4335 -1.0 -2.0 transcriptional regulator, AsnC family compare
Psyr_0255 -1.0 -1.3 glutamate-cysteine ligase compare
Psyr_0831 -1.0 -1.3 Two-component response regulator CbrB compare
Psyr_5129 -0.9 -3.0 chromosome segregation DNA-binding protein compare
Psyr_4884 -0.9 -3.5 Rhodanese-like protein compare
Psyr_4567 -0.9 -2.5 Protein of unknown function UPF0075 compare
Psyr_4125 -0.9 -1.0 Protein of unknown function DUF1043 compare
Psyr_4140 -0.9 -1.5 Protein of unknown function DUF140 compare
Psyr_1419 -0.9 -1.7 preQ(0) biosynthesis protein QueC compare
Psyr_1596 -0.9 -2.1 Helix-turn-helix motif protein compare
Psyr_4178 -0.9 -3.0 tRNA pseudouridine synthase B compare
Psyr_0574 -0.9 -2.1 protease FtsH subunit HflK compare
Psyr_4887 -0.9 -4.8 Peptidase S41A, C-terminal protease compare
Psyr_4802 -0.9 -2.5 Secretion protein HlyD compare
Psyr_2030 -0.9 -2.1 Calcium-binding EF-hand compare
Psyr_0849 -0.9 -3.3 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_1973 -0.9 -3.2 Aspartate transaminase compare
Psyr_3626 -0.9 -2.5 transcriptional regulator, MarR family compare
Psyr_4143 -0.8 -2.2 HAD-superfamily hydrolase, subfamily IIIA:Phosphatase YrbI compare
Psyr_3585 -0.8 -1.9 Sua5/YciO/YrdC/YwlC compare
Psyr_3315 -0.8 -2.1 conserved hypothetical protein compare
Psyr_1378 -0.8 -1.2 RecA protein compare
Psyr_2464 -0.8 -3.7 methionine synthase (B12-dependent) compare
Psyr_2327 -0.8 -2.2 GTP cyclohydrolase subunit MoaA compare
Psyr_4843 -0.8 -1.7 NUDIX hydrolase compare
Psyr_0535 -0.8 -1.3 toluene tolerance protein, putative compare
Psyr_1109 -0.8 -3.5 6-phosphogluconate dehydratase compare
Psyr_1806 -0.8 -2.0 Ureidoglycolate hydrolase compare
Psyr_2987 -0.8 -2.7 Cof protein:HAD-superfamily hydrolase, subfamily IIB compare
Psyr_4158 -0.8 -3.7 conserved hypothetical protein compare
Psyr_1410 -0.8 -1.8 Holliday junction DNA helicase RuvB compare
Psyr_0291 -0.8 -1.8 DedA compare
Psyr_4407 -0.8 -1.1 phosphoribosylamine--glycine ligase compare
Psyr_1811 -0.8 -2.3 transcriptional regulator, GntR family compare
Psyr_4788 -0.8 -1.2 lipoprotein, putative compare
Psyr_4750 -0.7 -2.2 cell division ATP-binding protein FtsE compare
Psyr_3954 -0.7 -2.3 GTP-binding protein LepA compare
Psyr_2947 -0.7 -2.4 hypothetical protein compare
Psyr_0485 -0.7 -3.3 Protein of unknown function DUF179 compare
Psyr_0838 -0.7 -2.2 Rieske [2Fe-2S] region compare
Psyr_0579 -0.7 -3.9 RNAse R compare
Psyr_0395 -0.7 -1.5 HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B compare
Psyr_2069 -0.7 -1.2 conserved hypothetical protein compare
Psyr_1160 -0.7 -5.1 Uncharacterized protein conserved in bacteria-like protein compare
Psyr_4838 -0.7 -1.7 transcriptional regulator, MerR family compare
Psyr_4089 -0.7 -2.0 PAS compare
Psyr_3791 -0.7 -1.6 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal compare
Psyr_1850 -0.7 -2.5 [LSU ribosomal protein L3P]-glutamine N5-methyltransferase compare
Psyr_5067 -0.7 -1.5 conserved hypothetical protein compare
Psyr_1530 -0.7 -1.7 hypothetical protein compare
Psyr_2134 -0.7 -1.4 protein of unknown function DUF903 compare
Psyr_1852 -0.7 -2.0 conserved hypothetical protein compare
Psyr_2851 -0.7 -1.7 conserved hypothetical protein compare
Psyr_4100 -0.7 -3.7 D-alanine--D-alanine ligase compare
Psyr_3906 -0.7 -1.4 regulatory protein, DeoR compare
Psyr_1255 -0.7 -2.2 conserved hypothetical protein compare
Psyr_4623 -0.7 -3.4 Aminoglycoside phosphotransferase compare
Psyr_2201 -0.7 -2.4 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family compare
Psyr_2059 -0.7 -2.6 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer compare
Psyr_0060 -0.7 -2.2 Protein of unknown function DUF513 compare
Psyr_4138 -0.7 -1.9 Toluene tolerance compare
Psyr_4350 -0.7 -1.7 Protein of unknown function DUF218 compare
Psyr_4139 -0.7 -2.0 Mce4/Rv3499c/MTV023.06c protein compare
Psyr_1127 -0.7 -2.4 Heavy metal response regulator compare
Psyr_1455 -0.7 -2.9 conserved hypothetical protein compare
Psyr_1980 -0.7 -2.0 Heat shock protein Hsp20 compare
Psyr_0393 -0.7 -1.9 Protein of unknown function DUF971 compare
Psyr_3135 -0.7 -1.5 transcriptional regulator, GntR family compare
Psyr_1638 -0.7 -1.1 RNAse E compare
Psyr_2112 -0.6 -1.8 Protein with unknown function DUF469 compare
Psyr_1614 -0.6 -0.6 lipid A biosynthesis acyltransferase compare
Psyr_0268 -0.6 -1.4 DSBA oxidoreductase compare
Psyr_3094 -0.6 -2.8 Periplasmic binding protein compare
Psyr_1594 -0.6 -2.7 FKBP-type peptidyl-prolyl isomerase, N-terminal:Peptidylprolyl isomerase, FKBP-type compare
Psyr_4346 -0.6 -2.8 PhoH-like protein compare
Psyr_0281 -0.6 -1.8 ABC transporter compare
Psyr_2779 -0.6 -1.5 Phage minor tail compare
Psyr_3637 -0.6 -3.7 Glycosyl transferase, family 4 compare
Psyr_3620 -0.6 -0.7 hypothetical protein compare
Psyr_4408 -0.6 -2.8 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_0364 -0.6 -2.3 sodium/proton antiporter, NhaA family compare
Psyr_3459 -0.6 -1.8 Helix-turn-helix, Fis-type compare
Psyr_3841 -0.6 -1.7 conserved hypothetical protein compare
Psyr_0884 -0.6 -3.3 conserved hypothetical protein compare
Psyr_3779 -0.6 -2.0 GCN5-related N-acetyltransferase compare
Psyr_3848 -0.6 -2.0 L-valine ABC transporter ATP-binding protein / L-isoleucine ABC transporter ATP-binding protein / L-leucine ABC transporter ATP-binding protein compare
Psyr_0148 -0.6 -1.8 hypothetical protein compare
Psyr_1832 -0.6 -1.4 Exonuclease compare
Psyr_3179 -0.6 -1.1 DNA translocase FtsK compare
Psyr_4404 -0.6 -1.1 tRNA-U20-dihydrouridine synthase compare
Psyr_1942 -0.6 -2.5 conserved hypothetical protein compare
Psyr_2487 -0.6 -1.8 Short-chain dehydrogenase/reductase SDR compare
Psyr_5102 -0.6 -1.5 ABC transporter compare
Psyr_0573 -0.6 -2.4 GTP-binding protein HflX compare
Psyr_0519 -0.6 -3.5 Glutamate-ammonia-ligase adenylyltransferase compare
Psyr_4789 -0.6 -1.9 lipoprotein, putative compare
Psyr_0017 -0.6 -1.6 16S rRNA m(5)C-967 methyltransferase compare
Psyr_2774 -0.6 -1.2 Bacteriophage lambda tail assembly I compare
Psyr_3512 -0.6 -2.2 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal compare
Psyr_0137 -0.6 -0.8 outer membrane transport energization protein ExbD compare
Psyr_2467 -0.6 -2.0 3-methylcrotonoyl-CoA carboxylase, alpha subunit compare
Psyr_2469 -0.6 -2.8 Propionyl-CoA carboxylase compare
Psyr_3611 -0.6 -2.0 Protein of unknown function DUF815 compare
Psyr_0171 -0.6 -2.4 EAL compare
Psyr_2628 -0.6 -2.2 ABC transporter compare
Psyr_3395 -0.6 -2.5 FlhB domain protein compare
Psyr_1008 -0.6 -1.9 conserved hypothetical protein compare
Psyr_0275 -0.5 -2.5 Periplasmic solute binding protein compare
Psyr_4882 -0.5 -2.4 protein translocase subunit secB compare
Psyr_2152 -0.5 -3.0 monosaccharide ABC transporter ATP-binding protein, CUT2 family compare
Psyr_4683 -0.5 -1.8 dethiobiotin synthase compare
Psyr_3095 -0.5 -1.4 transport system permease protein compare
Psyr_4415 -0.5 -2.5 cobalt-factor II C20-methyltransferase / precorrin-2 C20-methyltransferase compare
Psyr_0099 -0.5 -1.6 Conserved hypothetical protein compare
Psyr_0680 -0.5 -1.9 DNA helicase/exodeoxyribonuclease V, gamma subunit compare
Psyr_2154 -0.5 -3.0 transcriptional regulator, LacI family compare
Psyr_0497 -0.5 -1.3 LamB/YcsF compare
Psyr_4051 -0.5 -1.6 transcriptional regulator, ArsR family compare
Psyr_2254 -0.5 -1.7 Phosphonate metabolism PhnJ compare
Psyr_1094 -0.5 -1.0 cold-shock DNA-binding protein family compare
Psyr_5132 -0.5 -0.5 Glucose-inhibited division protein A subfamily compare
Psyr_0348 -0.5 -1.9 conserved hypothetical protein compare
Psyr_0435 -0.5 -1.0 membrane protein, putative compare
Psyr_4944 -0.5 -2.4 transcriptional regulator, LysR family compare
Psyr_2256 -0.5 -1.6 ABC transporter compare
Psyr_2151 -0.5 -1.2 monosaccharide ABC transporter substrate-binding protein, CUT2 family compare
Psyr_4019 -0.5 -1.7 H-NS family protein MvaT compare
Psyr_2528 -0.5 -1.9 Polysaccharide deacetylase compare
Psyr_2915 -0.5 -2.2 transcriptional regulator, AraC family with amidase-like domain protein compare
Psyr_4270 -0.5 -1.9 serine hydroxymethyltransferase compare
Psyr_4144 -0.5 -1.1 Protein of unknown function DUF1239 compare
Psyr_2226 -0.5 -2.0 formyltetrahydrofolate deformylase compare
Psyr_2128 -0.5 -1.5 Protein of unknown function DUF6 compare
Psyr_0734 -0.5 -2.0 Protein of unknown function DUF159 compare
Psyr_0907 -0.5 -0.9 conserved hypothetical protein compare
Psyr_0936 -0.5 -3.4 Glycosyl transferase, group 1 compare
Psyr_4837 -0.5 -3.5 Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase:Heavy metal translocating P-type ATPase compare
Psyr_2522 -0.5 -2.2 conserved hypothetical protein compare
Psyr_3028 -0.5 -0.7 Protein of unknown function DUF28 compare
Psyr_4900 -0.5 -2.6 AsmA compare
Psyr_0642 -0.5 -2.0 conserved hypothetical protein compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in no stress control experiments