Experiment set18IT045 for Klebsiella michiganensis M5al

Compare to:

D-Glucose carbon source and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS08395 +2.6 11.5 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS08390 +2.4 11.1 hypothetical protein compare
BWI76_RS08405 +2.4 9.8 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS21245 +2.4 11.7 nitrogen regulatory protein P-II compare
BWI76_RS01350 +2.0 4.0 NAD(P)H-flavin reductase compare
BWI76_RS21505 +1.9 3.9 hypothetical protein compare
BWI76_RS23885 +1.7 6.2 2-octaprenylphenol hydroxylase compare
BWI76_RS21500 +1.7 7.8 membrane protein compare
BWI76_RS19935 +1.6 4.0 hypothetical protein compare
BWI76_RS00240 +1.6 4.8 FMN-binding protein MioC compare
BWI76_RS13400 +1.6 4.4 GntR family transcriptional regulator compare
BWI76_RS01385 +1.5 5.0 potassium transporter compare
BWI76_RS06475 +1.5 2.8 protoheme IX farnesyltransferase compare
BWI76_RS05235 +1.4 3.3 hypothetical protein compare
BWI76_RS21130 +1.4 4.6 Fe-S assembly protein IscX compare
BWI76_RS20170 +1.4 7.6 NADH-quinone oxidoreductase subunit F compare
BWI76_RS24925 +1.4 2.0 DnaA initiator-associating protein DiaA compare
BWI76_RS06490 +1.3 9.9 cytochrome ubiquinol oxidase subunit I compare
BWI76_RS06495 +1.3 7.9 cytochrome ubiquinol oxidase subunit II compare
BWI76_RS20135 +1.3 8.3 NADH-quinone oxidoreductase subunit M compare
BWI76_RS20165 +1.2 6.4 NADH-quinone oxidoreductase subunit G compare
BWI76_RS20160 +1.2 5.6 NADH-quinone oxidoreductase subunit H compare
BWI76_RS06755 +1.2 9.5 sigma factor YlaC compare
BWI76_RS20145 +1.2 3.6 NADH-quinone oxidoreductase subunit K compare
BWI76_RS18140 +1.2 3.9 zinc ABC transporter permease compare
BWI76_RS17420 +1.1 3.0 hypothetical protein compare
BWI76_RS21460 +1.1 2.8 translation inhibitor protein RaiA compare
BWI76_RS13895 +1.1 1.6 LysR family transcriptional regulator compare
BWI76_RS14835 +1.1 1.8 hypothetical protein compare
BWI76_RS15260 +1.0 2.4 hypothetical protein compare
BWI76_RS18130 +1.0 3.1 zinc ABC transporter substrate-binding protein compare
BWI76_RS20130 +1.0 6.9 NADH-quinone oxidoreductase subunit N compare
BWI76_RS06485 +1.0 4.7 cytochrome o ubiquinol oxidase subunit III compare
BWI76_RS25485 +1.0 2.0 septum formation protein Maf compare
BWI76_RS02785 +1.0 5.0 AIG2 family protein compare
BWI76_RS20190 +1.0 6.5 NADH-quinone oxidoreductase subunit A compare
BWI76_RS20140 +1.0 5.0 NADH-quinone oxidoreductase subunit L compare
BWI76_RS04200 +0.9 3.5 phosphoglycerate mutase GpmB compare
BWI76_RS02180 +0.9 1.4 hypothetical protein compare
BWI76_RS21275 +0.9 3.9 lytic transglycosylase F compare
BWI76_RS20180 +0.9 5.4 NADH-quinone oxidoreductase subunit C/D compare
BWI76_RS12420 +0.9 1.5 peptide ABC transporter substrate-binding protein SapA compare
BWI76_RS24485 +0.9 2.6 bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase compare
BWI76_RS08425 +0.9 5.9 succinyl-CoA ligase subunit beta compare
BWI76_RS01185 +0.9 2.0 adenylate cyclase compare
BWI76_RS08430 +0.9 5.4 succinate--CoA ligase subunit alpha compare
BWI76_RS03105 +0.9 1.5 myo-inosose-2 dehydratase compare
BWI76_RS14615 +0.9 1.8 hypothetical protein compare
BWI76_RS21325 +0.9 3.1 hypothetical protein compare
BWI76_RS17075 +0.8 3.0 3-deoxy-7-phosphoheptulonate synthase compare
BWI76_RS16510 +0.8 4.5 transcriptional repressor PurR compare
BWI76_RS09050 +0.8 3.1 MFS transporter compare
BWI76_RS01855 +0.8 1.5 chorismate lyase compare
BWI76_RS23820 +0.8 3.3 flavodoxin FldB compare
BWI76_RS19025 +0.8 5.4 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) compare
BWI76_RS01885 +0.8 1.4 CsbD family protein compare
BWI76_RS07385 +0.8 1.8 short-chain dehydrogenase/reductase SDR compare
BWI76_RS15980 +0.8 2.3 lysine transporter LysE compare
BWI76_RS04980 +0.8 2.4 hypothetical protein compare
BWI76_RS10575 +0.8 1.5 polar amino acid ABC transporter permease compare
BWI76_RS06465 +0.7 1.3 IclR family transcriptional regulator compare
BWI76_RS19420 +0.7 4.9 Fe-S-binding ATPase compare
BWI76_RS07350 +0.7 2.0 alcohol dehydrogenase compare
BWI76_RS13215 +0.7 1.5 type I glyceraldehyde-3-phosphate dehydrogenase compare
BWI76_RS11900 +0.7 1.1 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
BWI76_RS13980 +0.7 1.1 hypothetical protein compare
BWI76_RS01870 +0.7 4.3 diacylglycerol kinase compare
BWI76_RS27820 +0.7 1.9 ilvB operon leader peptide IvbL compare
BWI76_RS15590 +0.7 3.0 hypothetical protein compare
BWI76_RS18565 +0.7 2.4 pemk protein compare
BWI76_RS22850 +0.7 1.9 tRNA pseudouridine synthase TruC compare
BWI76_RS20155 +0.7 1.2 NADH-quinone oxidoreductase subunit I compare
BWI76_RS21395 +0.7 2.2 DTW domain-containing protein compare
BWI76_RS22815 +0.7 5.7 hybrid sensor histidine kinase/response regulator compare
BWI76_RS03295 +0.7 2.0 transposase compare
BWI76_RS18605 +0.7 1.5 oxidoreductase molybdopterin-binding protein compare
BWI76_RS17915 +0.7 3.4 membrane protein compare
BWI76_RS04605 +0.6 1.2 thiamine ABC transporter ATP-binding protein compare
BWI76_RS16095 +0.6 2.3 thiamine biosynthesis protein ApbE compare
BWI76_RS11700 +0.6 1.2 hypothetical protein compare
BWI76_RS19865 +0.6 1.8 ecotin compare
BWI76_RS17155 +0.6 1.7 hypothetical protein compare
BWI76_RS24950 +0.6 2.7 hypothetical protein compare
BWI76_RS13050 +0.6 1.5 transcriptional regulator compare
BWI76_RS06810 +0.6 1.6 hypothetical protein compare
BWI76_RS01190 +0.6 2.7 iron donor protein CyaY compare
BWI76_RS26095 +0.6 1.6 shikimate kinase compare
BWI76_RS23325 +0.6 1.6 hypothetical protein compare
BWI76_RS26185 +0.6 2.7 thiosulfate sulfurtransferase compare
BWI76_RS23460 +0.6 3.6 hypothetical protein compare
BWI76_RS07475 +0.6 0.9 DNA-binding transcriptional regulator RamA compare
BWI76_RS24825 +0.6 2.0 2-hydroxy-3-oxopropionate reductase compare
BWI76_RS19735 +0.6 3.8 bifunctional PTS fructose transporter subunit IIA/HPr protein compare
BWI76_RS05880 +0.6 1.0 AraC-type DNA-binding domain-containing protein compare
BWI76_RS18360 +0.6 0.8 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS13330 +0.6 1.5 tellurite resistance methyltransferase TehB compare
BWI76_RS16160 +0.6 1.8 LysR family transcriptional regulator compare
BWI76_RS10530 +0.6 1.1 GntR family transcriptional regulator with compare
BWI76_RS12040 +0.6 1.2 hypothetical protein compare
BWI76_RS15195 +0.6 1.5 DUF4186 domain-containing protein compare
BWI76_RS08500 +0.6 2.1 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS17400 +0.6 1.1 transporter compare
BWI76_RS06320 +0.6 2.3 Xaa-Pro aminopeptidase compare
BWI76_RS04955 +0.6 0.9 hypoxanthine phosphoribosyltransferase compare
BWI76_RS06190 +0.6 1.9 hypothetical protein compare
BWI76_RS23260 +0.6 2.8 prepilin-type cleavage/methylation domain-containing protein compare
BWI76_RS13220 +0.6 2.2 N-acetyltransferase compare
BWI76_RS12270 +0.6 1.9 hypothetical protein compare
BWI76_RS08735 +0.6 3.4 Urocanate hydratase (EC 4.2.1.49) (from data) compare
BWI76_RS18135 +0.6 3.3 zinc ABC transporter ATP-binding protein ZnuC compare
BWI76_RS20150 +0.6 1.8 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS08215 +0.6 1.3 glucosamine-6-phosphate deaminase compare
BWI76_RS17610 +0.6 3.9 LysR family transcriptional regulator compare
BWI76_RS17985 +0.6 2.9 hypothetical protein compare
BWI76_RS09860 +0.6 2.0 hypothetical protein compare
BWI76_RS26105 +0.6 2.1 hypothetical protein compare
BWI76_RS04975 +0.6 2.9 PTS fructose subfamily transporter subunit IIA compare
BWI76_RS12735 +0.6 2.5 phage repressor protein compare
BWI76_RS17935 +0.6 1.6 DUF2627 domain-containing protein compare
BWI76_RS17605 +0.6 4.7 phosphoenolpyruvate carboxykinase (ATP) compare
BWI76_RS19205 +0.6 1.9 putative proline iminopeptidase compare
BWI76_RS09725 +0.6 1.9 MurR/RpiR family transcriptional regulator compare
BWI76_RS05515 +0.6 1.6 NADH:ubiquinone reductase (Na(+)-transporting) subunit F compare
BWI76_RS20740 +0.6 1.8 coproporphyrinogen III oxidase compare
BWI76_RS16805 +0.6 1.5 basic amino acid ABC transporter substrate-binding protein compare
BWI76_RS07730 +0.6 1.1 iron-enterobactin transporter membrane protein compare
BWI76_RS19310 +0.6 1.6 ABC transporter permease compare
BWI76_RS22185 +0.6 2.2 hypothetical protein compare
BWI76_RS08985 +0.6 2.3 threonine/homoserine exporter RhtA compare
BWI76_RS10500 +0.6 1.1 flavoprotein monooxygenase compare
BWI76_RS12985 +0.6 1.4 transcriptional regulator compare
BWI76_RS11035 +0.6 2.1 putative LysR-family transcriptional regulator compare
BWI76_RS00140 +0.6 1.1 phosphate transport system regulator PhoU compare
BWI76_RS18780 +0.6 1.1 D-alanyl-D-alanine carboxypeptidase compare
BWI76_RS12940 +0.6 1.7 AraC family transcriptional regulator compare
BWI76_RS11805 +0.5 1.9 hypothetical protein compare
BWI76_RS15620 +0.5 1.3 hypothetical protein compare
BWI76_RS24500 +0.5 1.3 urease subunit gamma compare
BWI76_RS15740 +0.5 1.7 HNH endonuclease compare
BWI76_RS23735 +0.5 1.9 sugar diacid utilization regulator compare
BWI76_RS15795 +0.5 2.1 bacteriophage CII family protein compare
BWI76_RS18580 +0.5 1.5 hypothetical protein compare
BWI76_RS15035 +0.5 1.4 metal ABC transporter permease compare
BWI76_RS17525 +0.5 0.9 XshC-Cox1-family protein compare
BWI76_RS24345 +0.5 1.8 NADPH quinone reductase MdaB compare
BWI76_RS27065 +0.5 4.1 valine--pyruvate transaminase compare
BWI76_RS09520 +0.5 1.6 arginine ABC transporter ATP-binding protein ArtP compare
BWI76_RS11990 +0.5 3.6 exoribonuclease II compare
BWI76_RS09505 +0.5 1.3 arginine transporter permease subunit ArtM compare
BWI76_RS08275 +0.5 1.4 LexA regulated protein compare
BWI76_RS00765 +0.5 2.2 DNA-binding transcriptional regulator CytR compare
BWI76_RS16455 +0.5 1.6 superoxide dismutase compare
BWI76_RS22120 +0.5 3.4 glutamate--cysteine ligase compare
BWI76_RS21560 +0.5 1.9 DNA repair protein RecN compare
BWI76_RS07985 +0.5 0.9 fluoride ion transporter CrcB compare
BWI76_RS06420 +0.5 3.7 oxidoreductase compare
BWI76_RS07970 +0.5 1.4 hypothetical protein compare
BWI76_RS17920 +0.5 0.7 23S rRNA (guanine(745)-N(1))-methyltransferase compare
BWI76_RS11155 +0.5 1.7 penicillin-binding protein activator LpoB compare
BWI76_RS14170 +0.5 1.7 hypothetical protein compare
BWI76_RS05465 +0.5 0.9 amidohydrolase compare
BWI76_RS06560 +0.5 1.9 7-cyano-7-deazaguanine synthase QueC compare
BWI76_RS03500 +0.5 4.3 hypothetical protein compare
BWI76_RS07305 +0.5 2.3 sucrose operon repressor compare
BWI76_RS14845 +0.5 3.2 hypothetical protein compare
BWI76_RS01260 +0.5 3.7 lysophospholipase L2 compare
BWI76_RS13275 +0.5 1.3 hypothetical protein compare
BWI76_RS05885 +0.5 2.1 anion permease compare
BWI76_RS24915 +0.5 3.9 penicillin-binding protein activator compare
BWI76_RS09115 +0.5 2.1 30S ribosomal protein S12 methylthiotransferase RimO compare
BWI76_RS05800 +0.5 1.5 phage transcriptional activator, Ogr/delta compare
BWI76_RS14000 +0.5 1.6 glutamine amidotransferase compare
BWI76_RS14970 +0.5 1.2 pyrroline-5-carboxylate reductase compare
BWI76_RS06835 +0.5 3.5 molecular chaperone HtpG compare
BWI76_RS22125 +0.5 1.0 membrane protein compare
BWI76_RS09820 +0.5 2.4 hypothetical protein compare
BWI76_RS19470 +0.5 1.5 DNA-binding response regulator compare
BWI76_RS16390 +0.5 3.1 dipeptide/tripeptide permease A compare
BWI76_RS24270 +0.5 2.2 membrane protein compare
BWI76_RS02940 +0.5 1.8 RpiR family transcriptional regulator compare
BWI76_RS19580 +0.5 1.3 FAA-hydrolase compare
BWI76_RS07765 +0.5 2.0 thioesterase compare
BWI76_RS15280 +0.5 1.4 sugar transporter compare
BWI76_RS16935 +0.5 0.9 shikimate dehydrogenase compare
BWI76_RS06640 +0.5 2.6 hypothetical protein compare
BWI76_RS15845 +0.5 0.7 hypothetical protein compare
BWI76_RS04845 +0.5 2.4 nicotinate-nucleotide pyrophosphorylase compare
BWI76_RS19835 +0.5 2.3 nucleoid-associated protein YejK compare
BWI76_RS14950 +0.5 1.7 glycosylasparaginase compare
BWI76_RS19210 +0.5 2.3 LuxR family transcriptional regulator compare
BWI76_RS08370 +0.5 1.4 membrane protein compare
BWI76_RS02320 +0.5 1.6 divalent ion tolerance protein CutA compare
BWI76_RS15445 +0.5 1.6 hypothetical protein compare
BWI76_RS22450 +0.5 1.4 selenoprotein W-related protein compare
BWI76_RS14575 +0.5 1.4 TENA/THI-4 family protein compare
BWI76_RS07740 +0.5 0.9 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS01895 +0.5 1.2 cupin compare
BWI76_RS12275 +0.5 3.2 hypothetical protein compare
BWI76_RS25935 +0.5 1.3 glutathione-regulated potassium-efflux system ancillary protein KefG compare
BWI76_RS26190 +0.5 1.6 glycerol-3-phosphate dehydrogenase compare


Specific Phenotypes

For 15 genes in this experiment

For nitrogen fixation D-Glucose in Klebsiella michiganensis M5al

For nitrogen fixation D-Glucose across organisms