Experiment set17IT043 for Pseudomonas stutzeri RCH2

Compare to:

LB with Thallium(I) acetate 0.1 mg/ml

200 most important genes:

  gene name fitness t score description  
Psest_0623 -4.8 -16.3 Arsenite efflux pump ACR3 and related permeases conserved
Psest_1809 -4.3 -14.2 Membrane protein involved in the export of O-antigen and teichoic acid compare
Psest_1496 -4.2 -1.9 Holliday junction DNA helicase, RuvA subunit compare
Psest_3565 -3.9 -2.5 hypothetical protein compare
Psest_1814 -3.9 -20.9 pseudaminic acid biosynthesis N-acetyl transferase compare
Psest_2945 -3.4 -2.0 septum site-determining protein MinC compare
Psest_0725 -3.2 -2.2 Negative regulator of beta-lactamase expression compare
Psest_3960 -3.1 -1.9 3'(2'),5'-bisphosphate nucleotidase, bacterial compare
Psest_1417 -3.0 -1.6 hypothetical protein compare
Psest_2855 -2.9 -2.1 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
Psest_4298 -2.6 -1.2 Response regulator containing a CheY-like receiver domain and a GGDEF domain compare
Psest_4142 -2.5 -1.9 hypothetical protein compare
Psest_3860 -2.5 -3.3 Predicted permeases compare
Psest_2946 -2.4 -2.8 septum site-determining protein MinD compare
Psest_1888 -2.3 -1.2 Sua5/YciO/YrdC/YwlC family protein compare
Psest_1012 -2.3 -5.1 Signal transduction histidine kinase compare
Psest_1510 -2.2 -3.0 Putative Zn-dependent protease, contains TPR repeats compare
Psest_0516 -2.0 -8.1 D-alanyl-D-alanine carboxypeptidase compare
Psest_1306 -1.9 -2.2 hypothetical protein compare
Psest_1466 -1.9 -3.5 transcriptional regulator, Spx/MgsR family compare
Psest_2304 -1.9 -1.2 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family compare
Psest_0028 -1.8 -3.0 Coproporphyrinogen III oxidase compare
Psest_0740 -1.8 -2.2 Transcriptional regulator compare
Psest_3270 -1.8 -1.9 probable S-adenosylmethionine-dependent methyltransferase, YraL family compare
Psest_2285 -1.8 -3.1 ATP-dependent protease La compare
Psest_0514 -1.8 -4.8 lytic murein transglycosylase B compare
Psest_3222 -1.8 -2.5 Putative threonine efflux protein compare
Psest_0401 -1.7 -2.4 isopentenyl-diphosphate delta-isomerase, type 2 compare
Psest_3146 -1.7 -1.6 hypothetical protein compare
Psest_2872 -1.7 -2.1 protein RecA compare
Psest_3938 -1.7 -3.1 Uncharacterized protein conserved in bacteria compare
Psest_1305 -1.7 -3.8 Heat shock protein compare
Psest_0520 -1.7 -0.7 hypothetical protein compare
Psest_2651 -1.7 -4.2 DNA topoisomerase I, bacterial compare
Psest_0958 -1.7 -6.2 Oligoketide cyclase/lipid transport protein compare
Psest_0442 -1.6 -2.5 ATPases of the AAA+ class compare
Psest_1065 -1.6 -2.6 hypothetical protein compare
Psest_3128 -1.6 -4.6 Protein-disulfide isomerase compare
Psest_0872 -1.6 -1.1 Helix-turn-helix. compare
Psest_2434 -1.6 -2.8 Protein of unknown function (DUF2892). compare
Psest_0115 -1.6 -1.4 Predicted integral membrane protein compare
Psest_3070 -1.5 -2.3 3-oxoadipyl-CoA thiolase compare
Psest_3100 -1.5 -1.0 RNA polymerase sigma factor RpoE compare
Psest_3391 -1.5 -2.1 Uncharacterized protein conserved in bacteria compare
Psest_3816 -1.5 -1.1 DNA-directed RNA polymerase, omega subunit compare
Psest_1884 -1.5 -2.2 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_2018 -1.5 -2.7 Uncharacterized conserved protein compare
Psest_0277 -1.5 -1.3 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family compare
Psest_3518 -1.4 -0.7 Transcriptional regulators compare
Psest_1813 -1.4 -5.8 pseudaminic acid biosynthesis-associated protein PseG compare
Psest_0309 -1.4 -1.2 RND family efflux transporter, MFP subunit compare
Psest_2538 -1.4 -1.3 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases compare
Psest_0466 -1.4 -3.6 Lipopolysaccharide kinase (Kdo/WaaP) family. compare
Psest_2757 -1.4 -1.0 hypothetical protein compare
Psest_2775 -1.4 -3.0 Glycerol-3-phosphate dehydrogenase compare
Psest_4001 -1.4 -5.0 acetylornithine deacetylase (ArgE) compare
Psest_1647 -1.3 -4.4 Lhr-like helicases compare
Psest_0719 -1.3 -3.9 Uncharacterized protein conserved in bacteria compare
Psest_0744 -1.3 -0.9 Uncharacterized conserved protein compare
Psest_1804 -1.3 -1.7 Superfamily II DNA and RNA helicases compare
Psest_3316 -1.3 -4.8 Predicted P-loop-containing kinase compare
Psest_3014 -1.3 -1.5 cob(I)alamin adenosyltransferase compare
Psest_2975 -1.3 -2.2 tRNA_Arg_CCT compare
Psest_3155 -1.3 -2.8 hypothetical protein compare
Psest_2850 -1.3 -0.7 Multisubunit Na+/H+ antiporter, MnhC subunit compare
Psest_2278 -1.3 -2.9 coenzyme PQQ biosynthesis protein PqqD compare
Psest_1259 -1.3 -3.1 23S rRNA m2A2503 methyltransferase compare
Psest_4044 -1.3 -1.9 type I site-specific deoxyribonuclease, HsdR family compare
Psest_0759 -1.2 -1.2 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT). compare
Psest_3458 -1.2 -2.6 hypothetical protein compare
Psest_0013 -1.2 -3.9 Lauroyl/myristoyl acyltransferase compare
Psest_2772 -1.2 -3.0 MIP family channel proteins compare
Psest_0515 -1.2 -3.2 rare lipoprotein A compare
Psest_4134 -1.2 -1.5 Uncharacterized protein conserved in bacteria compare
Psest_1354 -1.1 -1.2 Uncharacterized protein conserved in bacteria compare
Psest_4191 -1.1 -2.1 Transcriptional regulator compare
Psest_0414 -1.1 -2.9 biotin biosynthesis protein BioC compare
Psest_4177 -1.1 -1.6 flagellar biosynthetic protein FliP compare
Psest_0558 -1.1 -0.7 urease, beta subunit compare
Psest_1999 -1.1 -0.9 pseudouridine synthase compare
Psest_1013 -1.1 -2.5 phosphoribosylamine--glycine ligase compare
Psest_0592 -1.1 -2.2 hypothetical protein compare
Psest_1663 -1.1 -1.9 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes compare
Psest_2442 -1.1 -1.8 hypothetical protein compare
Psest_2001 -1.1 -1.2 2-phosphoglycolate phosphatase, prokaryotic compare
Psest_1595 -1.1 -1.0 Copper chaperone compare
Psest_3351 -1.1 -4.0 peptide chain release factor 3 compare
Psest_3322 -1.0 -7.3 TIGR02099 family protein compare
Psest_3148 -1.0 -0.8 hypothetical protein compare
Psest_1660 -1.0 -1.3 NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit compare
Psest_0526 -1.0 -1.4 hypothetical protein compare
Psest_2622 -1.0 -2.3 TadE-like protein. compare
Psest_1206 -1.0 -2.5 ABC-type Mn2+/Zn2+ transport systems, permease components compare
Psest_1167 -1.0 -0.8 hypothetical protein compare
Psest_1279 -1.0 -2.1 hypothetical protein compare
Psest_4371 -1.0 -1.7 Multisubunit Na+/H+ antiporter, MnhB subunit compare
Psest_0575 -1.0 -0.7 HrpA-like helicases compare
Psest_3159 -1.0 -3.8 phosphoribosylformylglycinamidine synthase, single chain form compare
Psest_0644 -1.0 -2.0 siderophore ferric iron reductase, AHA_1954 family compare
Psest_3212 -1.0 -2.4 FKBP-type peptidyl-prolyl cis-trans isomerases 2 compare
Psest_1717 -1.0 -2.7 benzoate transporter compare
Psest_3488 -1.0 -1.7 Universal stress protein UspA and related nucleotide-binding proteins compare
Psest_3250 -1.0 -1.9 Rho termination factor, N-terminal domain. compare
Psest_2953 -1.0 -1.1 Histone acetyltransferase compare
Psest_3921 -1.0 -1.9 Uncharacterized protein conserved in bacteria compare
Psest_3338 -0.9 -1.1 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain compare
Psest_1472 -0.9 -4.2 Protein of unknown function (DUF3108). compare
Psest_3810 -0.9 -0.6 orotate phosphoribosyltransferase compare
Psest_0117 -0.9 -4.1 Uncharacterized protein conserved in bacteria (DUF2063). compare
Psest_3301 -0.9 -1.5 Predicted transcriptional regulator, BolA superfamily compare
Psest_4307 -0.9 -1.5 ABC-type Zn2+ transport system, periplasmic component/surface adhesin compare
Psest_1659 -0.9 -1.6 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit compare
Psest_0172 -0.9 -3.8 Uncharacterized protein conserved in bacteria compare
Psest_1471 -0.9 -2.8 Predicted membrane protein compare
Psest_3123 -0.9 -1.5 dihydroorotase, homodimeric type compare
Psest_2448 -0.9 -2.6 AraC-type DNA-binding domain-containing proteins compare
Psest_1657 -0.9 -0.9 NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit compare
Psest_0508 -0.9 -3.1 gamma-glutamyl phosphate reductase compare
Psest_1204 -0.9 -1.3 Transcriptional regulators compare
Psest_3749 -0.9 -4.8 Response regulator of the LytR/AlgR family compare
Psest_1087 -0.9 -0.7 uncharacterized peroxidase-related enzyme compare
Psest_3436 -0.9 -4.2 Domain of unknown function (DUF1987). compare
Psest_2104 -0.9 -0.8 IscR-regulated protein YhgI compare
Psest_1692 -0.9 -4.3 conserved hypothetical protein, YceG family compare
Psest_0212 -0.9 -1.1 exodeoxyribonuclease V, gamma subunit compare
Psest_4099 -0.9 -5.8 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component compare
Psest_2752 -0.9 -1.7 Uncharacterized protein conserved in bacteria compare
Psest_0230 -0.9 -3.6 Uncharacterized BCR, YitT family COG1284. compare
Psest_4151 -0.9 -1.6 Flagellar hook capping protein compare
Psest_0087 -0.9 -2.4 hypothetical protein compare
Psest_3857 -0.9 -2.7 ATPases involved in chromosome partitioning compare
Psest_2138 -0.8 -2.0 RND family efflux transporter, MFP subunit compare
Psest_2646 -0.8 -1.0 SOS regulatory protein LexA compare
Psest_3970 -0.8 -4.0 Transcriptional regulator compare
Psest_0191 -0.8 -0.4 PAS domain S-box compare
Psest_3961 -0.8 -3.4 NTP pyrophosphohydrolases including oxidative damage repair enzymes compare
Psest_1980 -0.8 -1.8 Uncharacterized conserved protein compare
Psest_3499 -0.8 -3.2 acyl-CoA thioesterase II compare
Psest_1242 -0.8 -1.5 tRNA-guanine transglycosylase, queuosine-34-forming compare
Psest_1516 -0.8 -1.3 Uncharacterized lipoprotein compare
Psest_3323 -0.8 -2.1 ribonuclease, Rne/Rng family compare
Psest_4252 -0.8 -1.8 Uncharacterized protein conserved in bacteria compare
Psest_2150 -0.8 -1.4 DNA polymerase LigD, polymerase domain compare
Psest_3005 -0.8 -1.3 Fructose-2,6-bisphosphatase compare
Psest_3697 -0.8 -1.4 Outer membrane lipoprotein carrier protein LolA. compare
Psest_1574 -0.8 -1.8 phenazine biosynthesis protein PhzF family compare
Psest_3862 -0.8 -4.8 phosphoenolpyruvate-protein phosphotransferase compare
Psest_0094 -0.8 -2.2 Uncharacterized enzyme of phosphonate metabolism compare
Psest_1877 -0.8 -1.0 AraC-type DNA-binding domain-containing proteins compare
Psest_2561 -0.8 -0.6 hypothetical protein compare
Psest_4045 -0.8 -2.4 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen compare
Psest_0485 -0.8 -1.5 clan AA aspartic protease, TIGR02281 family compare
Psest_1475 -0.8 -2.1 Uncharacterized protein conserved in bacteria compare
Psest_1292 -0.8 -3.8 monothiol glutaredoxin, Grx4 family compare
Psest_3527 -0.8 -2.1 Pseudouridylate synthases, 23S RNA-specific compare
Psest_0645 -0.8 -5.4 Siderophore synthetase component compare
Psest_3707 -0.8 -2.3 Transcriptional regulator compare
Psest_1768 -0.8 -1.8 thiopurine S-methyltransferase, Se/Te detoxification family compare
Psest_1837 -0.8 -2.7 Endoglucanase compare
Psest_4216 -0.8 -2.4 hypothetical protein compare
Psest_2896 -0.8 -2.3 hypothetical protein compare
Psest_2991 -0.8 -2.2 hypothetical protein compare
Psest_2068 -0.8 -3.5 ABC-type oligopeptide transport system, periplasmic component compare
Psest_0237 -0.8 -1.7 intracellular protease, PfpI family compare
Psest_0492 -0.7 -4.3 hypothetical protein compare
Psest_3926 -0.7 -4.6 GTP-binding protein TypA/BipA compare
Psest_1905 -0.7 -1.1 Uncharacterized conserved protein, contains double-stranded beta-helix domain compare
Psest_1421 -0.7 -1.5 Glutathione S-transferase compare
Psest_3272 -0.7 -2.6 TIGR00252 family protein compare
Psest_4160 -0.7 -1.8 RNA polymerase sigma factor, FliA/WhiG family compare
Psest_0601 -0.7 -1.3 hypothetical protein compare
Psest_3467 -0.7 -1.9 PAP2 (acid phosphatase) superfamily protein compare
Psest_1679 -0.7 -0.6 ribonuclease, Rne/Rng family compare
Psest_0422 -0.7 -3.0 Site-specific recombinase XerD compare
Psest_1327 -0.7 -3.7 Superfamily II DNA/RNA helicases, SNF2 family compare
Psest_1815 -0.7 -4.3 pseudaminic acid synthase compare
Psest_2992 -0.7 -2.2 Uncharacterized conserved protein compare
Psest_0487 -0.7 -1.6 Uncharacterized protein conserved in bacteria compare
Psest_2950 -0.7 -2.8 putative NAD(P)H quinone oxidoreductase, PIG3 family compare
Psest_3497 -0.7 -1.9 Predicted metalloprotease compare
Psest_0400 -0.7 -2.0 Geranylgeranyl pyrophosphate synthase compare
Psest_3540 -0.7 -2.7 hypothetical protein compare
Psest_4338 -0.7 -1.8 Fe2+-dicitrate sensor, membrane component compare
Psest_3180 -0.7 -3.5 Exonuclease I compare
Psest_2566 -0.7 -0.6 Uncharacterized protein conserved in bacteria compare
Psest_4145 -0.7 -1.7 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) compare
Psest_0717 -0.7 -5.1 Protein of unknown function (DUF1631). compare
Psest_0676 -0.7 -3.4 ATP-dependent metalloprotease FtsH compare
Psest_2718 -0.7 -0.6 hypothetical protein compare
Psest_2681 -0.7 -1.6 Uncharacterized protein conserved in bacteria compare
Psest_2643 -0.7 -0.7 Beta-glucosidase-related glycosidases compare
Psest_1782 -0.7 -0.6 Predicted transcriptional regulators compare
Psest_3545 -0.7 -2.4 clan AA aspartic protease, TIGR02281 family compare
Psest_3226 -0.7 -0.6 Predicted membrane protein compare
Psest_1147 -0.7 -1.9 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Psest_1871 -0.7 -3.4 Predicted esterase of the alpha-beta hydrolase superfamily compare
Psest_2892 -0.7 -1.8 Transcriptional regulator compare
Psest_4042 -0.7 -1.5 hypothetical protein compare
Psest_0730 -0.7 -2.1 O-6-methylguanine DNA methyltransferase compare
Psest_3230 -0.7 -2.5 Uncharacterized conserved protein compare


Specific Phenotypes

For 1 genes in this experiment

For stress Thallium(I) acetate in Pseudomonas stutzeri RCH2

For stress Thallium(I) acetate across organisms