Experiment set14S227 for Enterobacter sp. TBS_079

Compare to:

LB plate, 1:1 coculture with Bacillus_zanthoxyli_TBS_055

200 most important genes:

  gene name fitness t score description  
MPMX20_03986 -5.6 -2.9 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_03364 -5.2 -1.9 hypothetical protein compare
MPMX20_03095 -5.0 -1.8 hypothetical protein compare
MPMX20_04427 -4.4 -0.9 5S ribosomal RNA compare
MPMX20_03390 -4.1 -6.3 Outer membrane protein assembly factor BamB compare
MPMX20_03756 -4.0 -2.7 FAD assembly factor SdhE compare
MPMX20_01353 -4.0 -4.7 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_01570 -3.8 -1.8 Integration host factor subunit beta compare
MPMX20_02344 -3.7 -1.3 hypothetical protein compare
MPMX20_01354 -3.6 -1.9 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_01369 -3.6 -3.5 Tol-Pal system protein TolB compare
MPMX20_00998 -3.5 -2.8 Sec translocon accessory complex subunit YajC compare
MPMX20_01958 -3.4 -0.7 Fumarase D compare
MPMX20_01366 -3.4 -2.2 Tol-Pal system protein TolQ compare
MPMX20_01370 -3.4 -3.1 Peptidoglycan-associated lipoprotein compare
MPMX20_00419 -3.3 -7.8 Aspartate ammonia-lyase compare
MPMX20_01368 -3.3 -3.5 hypothetical protein compare
MPMX20_01349 -3.2 -5.4 Citrate synthase compare
MPMX20_01350 -3.2 -3.7 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_04504 -3.2 -2.0 hypothetical protein compare
MPMX20_04484 -3.1 -7.1 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
MPMX20_00107 -3.1 -5.9 Lipopolysaccharide core heptosyltransferase RfaQ compare
MPMX20_00825 -3.1 -1.1 Aspartate 1-decarboxylase compare
MPMX20_01357 -3.0 -4.6 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_04140 -3.0 -4.1 Malate dehydrogenase compare
MPMX20_03686 -3.0 -1.2 hypothetical protein compare
MPMX20_00722 -3.0 -7.6 Na(+)/H(+) antiporter NhaA compare
MPMX20_01356 -2.9 -7.6 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_02672 -2.9 -12.5 hypothetical protein compare
MPMX20_03754 -2.9 -3.5 Flavodoxin 2 compare
MPMX20_00480 -2.9 -2.5 50S ribosomal protein L9 compare
MPMX20_04301 -2.9 -2.4 Fe/S biogenesis protein NfuA compare
MPMX20_04137 -2.9 -2.0 Inner membrane protein YhcB compare
MPMX20_04556 -2.9 -7.0 Transcriptional regulatory protein CpxR compare
MPMX20_04639 -2.8 -1.0 Phosphate-binding protein PstS compare
MPMX20_03153 -2.8 -1.0 hypothetical protein compare
MPMX20_01334 -2.8 -6.8 Phosphoglucomutase compare
MPMX20_00441 -2.8 -1.2 Phosphatidylserine decarboxylase proenzyme compare
MPMX20_03264 -2.8 -3.3 Chorismate synthase compare
MPMX20_00197 -2.8 -1.0 tRNA-Tyr compare
MPMX20_04253 -2.8 -0.8 Malonate decarboxylase acyl carrier protein compare
MPMX20_02393 -2.8 -0.8 hypothetical protein compare
MPMX20_01333 -2.8 -3.8 Negative modulator of initiation of replication compare
MPMX20_03209 -2.8 -2.4 NADH-quinone oxidoreductase subunit K compare
MPMX20_02913 -2.8 -1.4 hypothetical protein compare
MPMX20_00241 -2.8 -6.1 Glucose-6-phosphate isomerase compare
MPMX20_00708 -2.7 -3.3 Aerobic respiration control protein ArcA compare
MPMX20_04374 -2.7 -1.5 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_00108 -2.7 -12.7 hypothetical protein compare
MPMX20_02635 -2.7 -1.5 Release factor glutamine methyltransferase compare
MPMX20_01866 -2.7 -2.6 Arginine N-succinyltransferase compare
MPMX20_04482 -2.7 -7.5 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase compare
MPMX20_03509 -2.6 -0.8 hypothetical protein compare
MPMX20_01901 -2.6 -1.2 Integration host factor subunit alpha compare
MPMX20_03253 -2.6 -4.0 tRNA pseudouridine synthase A compare
MPMX20_03208 -2.6 -5.5 NADH-quinone oxidoreductase subunit L compare
MPMX20_02668 -2.6 -2.7 hypothetical protein compare
MPMX20_04491 -2.6 -3.9 Thioredoxin 1 compare
MPMX20_01734 -2.5 -4.2 Lipid A biosynthesis lauroyltransferase compare
MPMX20_01355 -2.5 -0.5 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_03334 -2.5 -0.7 hypothetical protein compare
MPMX20_01967 -2.5 -2.1 hypothetical protein compare
MPMX20_00110 -2.5 -6.2 hypothetical protein compare
MPMX20_03580 -2.5 -2.4 Protein RecA compare
MPMX20_04279 -2.5 -2.6 Shikimate kinase 1 compare
MPMX20_04079 -2.5 -1.4 Protein-export membrane protein SecG compare
MPMX20_01972 -2.4 -0.7 tRNA-Val compare
MPMX20_03487 -2.4 -4.1 Outer membrane protein assembly factor BamE compare
MPMX20_03396 -2.4 -4.4 Nucleoside diphosphate kinase compare
MPMX20_00831 -2.4 -1.6 RNA polymerase-binding transcription factor DksA compare
MPMX20_04058 -2.4 -2.9 hypothetical protein compare
MPMX20_04306 -2.4 -4.5 Glycerol-3-phosphate regulon repressor compare
MPMX20_00105 -2.4 -10.5 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_03769 -2.4 -3.0 Cell division protein ZapA compare
MPMX20_01367 -2.4 -3.7 Tol-Pal system protein TolR compare
MPMX20_00801 -2.4 -2.8 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
MPMX20_01156 -2.4 -3.1 hypothetical protein compare
MPMX20_02591 -2.4 -2.8 DNA-binding protein H-NS compare
MPMX20_01030 -2.4 -4.3 Lon protease compare
MPMX20_04768 -2.4 -1.6 hypothetical protein compare
MPMX20_03386 -2.4 -0.7 putative protein YfgJ compare
MPMX20_01352 -2.3 -6.0 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_01286 -2.3 -0.8 Sec-independent protein translocase protein TatE compare
MPMX20_03090 -2.3 -0.9 Methionine--tRNA ligase compare
MPMX20_04377 -2.3 -5.5 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD compare
MPMX20_04585 -2.3 -4.4 HTH-type transcriptional repressor CsqR compare
MPMX20_00258 -2.3 -3.8 Diacylglycerol kinase compare
MPMX20_04532 -2.3 -1.8 Met repressor compare
MPMX20_00720 -2.3 -0.8 Chaperone protein DnaK compare
MPMX20_03753 -2.3 -2.7 Tyrosine recombinase XerD compare
MPMX20_01351 -2.2 -2.8 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_03012 -2.2 -4.4 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_01969 -2.2 -1.5 Carbonic anhydrase 1 compare
MPMX20_02696 -2.2 -5.8 Murein tetrapeptide carboxypeptidase compare
MPMX20_03218 -2.1 -3.2 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_04442 -2.1 -2.1 Sec-independent protein translocase protein TatC compare
MPMX20_03440 -2.1 -2.9 Elongation factor 4 compare
MPMX20_03215 -2.1 -2.3 NADH-quinone oxidoreductase subunit E compare
MPMX20_03805 -2.1 -9.5 Glutathione synthetase compare
MPMX20_00773 -2.1 -8.9 Catabolite repressor/activator compare
MPMX20_03154 -2.1 -7.6 Inner membrane protein YejM compare
MPMX20_04552 -2.1 -4.6 ATP-dependent 6-phosphofructokinase isozyme 1 compare
MPMX20_00693 -2.1 -6.1 Phosphoserine phosphatase compare
MPMX20_04443 -2.1 -1.5 Sec-independent protein translocase protein TatB compare
MPMX20_04486 -2.1 -6.3 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MPMX20_04275 -2.1 -1.3 Ribulose-phosphate 3-epimerase compare
MPMX20_03214 -2.0 -5.6 NADH-quinone oxidoreductase subunit F compare
MPMX20_01550 -2.0 -2.3 Thioredoxin reductase compare
MPMX20_02021 -2.0 -5.2 Fumarate hydratase class I, aerobic compare
MPMX20_04171 -2.0 -2.0 hypothetical protein compare
MPMX20_00109 -2.0 -9.8 hypothetical protein compare
MPMX20_02738 -2.0 -3.4 RNA chaperone ProQ compare
MPMX20_04489 -2.0 -7.3 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_04104 -2.0 -4.0 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC compare
MPMX20_01019 -2.0 -3.3 Protoheme IX farnesyltransferase compare
MPMX20_04099 -2.0 -3.6 Intermembrane phospholipid transport system binding protein MlaD compare
MPMX20_03660 -2.0 -3.2 hypothetical protein compare
MPMX20_01364 -2.0 -3.0 hypothetical protein compare
MPMX20_00134 -2.0 -5.1 Mannitol-1-phosphate 5-dehydrogenase compare
MPMX20_02295 -2.0 -0.8 hypothetical protein compare
MPMX20_04519 -2.0 -4.5 Hydrogen peroxide-inducible genes activator compare
MPMX20_03571 -2.0 -1.1 tRNA-Arg compare
MPMX20_02770 -2.0 -2.4 Dihydroneopterin triphosphate diphosphatase compare
MPMX20_03301 -1.9 -1.6 hypothetical protein compare
MPMX20_00453 -1.9 -0.9 RNA-binding protein Hfq compare
MPMX20_03780 -1.9 -1.9 Transketolase 1 compare
MPMX20_02776 -1.9 -4.9 tRNA U34 carboxymethyltransferase compare
MPMX20_00816 -1.9 -3.3 hypothetical protein compare
MPMX20_02693 -1.9 -2.1 hypothetical protein compare
MPMX20_01984 -1.9 -1.0 Ribonuclease T compare
MPMX20_00452 -1.9 -5.2 tRNA dimethylallyltransferase compare
MPMX20_04200 -1.9 -4.0 HTH-type transcriptional regulator ZntR compare
MPMX20_00749 -1.9 -3.1 Chaperone SurA compare
MPMX20_03443 -1.9 -4.0 Anti-sigma-E factor RseA compare
MPMX20_03998 -1.9 -7.9 Putative membrane-bound redox modulator Alx compare
MPMX20_04517 -1.8 -5.6 HTH-type transcriptional repressor FabR compare
MPMX20_03013 -1.8 -2.2 dTDP-glucose 4,6-dehydratase compare
MPMX20_03227 -1.8 -2.5 Phosphate acetyltransferase compare
MPMX20_00262 -1.8 -2.2 Zinc uptake regulation protein compare
MPMX20_04110 -1.8 -3.6 Nitrogen regulatory protein compare
MPMX20_04276 -1.8 -3.6 DNA adenine methylase compare
MPMX20_04670 -1.8 -1.6 hypothetical protein compare
MPMX20_00456 -1.8 -3.4 Modulator of FtsH protease HflC compare
MPMX20_00745 -1.8 -2.9 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_03767 -1.8 -3.7 Xaa-Pro aminopeptidase compare
MPMX20_01073 -1.8 -0.9 Nucleoid-associated protein YbaB compare
MPMX20_03490 -1.8 -2.4 SsrA-binding protein compare
MPMX20_00086 -1.8 -2.9 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_04278 -1.8 -2.1 3-dehydroquinate synthase compare
MPMX20_04465 -1.8 -1.7 Tyrosine recombinase XerC compare
MPMX20_01005 -1.8 -2.2 Transcriptional repressor NrdR compare
MPMX20_03017 -1.8 -6.3 hypothetical protein compare
MPMX20_02732 -1.8 -2.2 PhoP/PhoQ regulator MgrB compare
MPMX20_03213 -1.7 -7.0 NADH-quinone oxidoreductase subunit G compare
MPMX20_01810 -1.7 -6.4 Virulence sensor histidine kinase PhoQ compare
MPMX20_04641 -1.7 -1.9 Phosphate transport system permease protein PstA compare
MPMX20_02953 -1.7 -2.0 hypothetical protein compare
MPMX20_01974 -1.7 -1.3 Riboflavin synthase compare
MPMX20_03323 -1.7 -2.3 Oxygen-dependent coproporphyrinogen-III oxidase compare
MPMX20_01135 -1.7 -2.6 HTH-type transcriptional regulator BetI compare
MPMX20_03641 -1.7 -4.4 Phosphoadenosine phosphosulfate reductase compare
MPMX20_04346 -1.7 -6.7 Zinc/cadmium/lead-transporting P-type ATPase compare
MPMX20_00385 -1.7 -5.0 hypothetical protein compare
MPMX20_03407 -1.7 -1.6 Chaperone protein HscA compare
MPMX20_04668 -1.7 -1.6 hypothetical protein compare
MPMX20_02748 -1.7 -3.2 Protein YobA compare
MPMX20_03742 -1.7 -4.4 HTH-type transcriptional regulator GalR compare
MPMX20_03309 -1.7 -1.6 Phosphocarrier protein HPr compare
MPMX20_04467 -1.7 -4.0 Diaminopimelate epimerase compare
MPMX20_01869 -1.7 -5.4 Succinylglutamate desuccinylase compare
MPMX20_02657 -1.7 -10.6 hypothetical protein compare
MPMX20_00455 -1.7 -6.6 Modulator of FtsH protease HflK compare
MPMX20_03020 -1.7 -4.0 hypothetical protein compare
MPMX20_02912 -1.6 -0.6 hypothetical protein compare
MPMX20_04730 -1.6 -2.9 hypothetical protein compare
MPMX20_03341 -1.6 -5.7 Glycine cleavage system transcriptional repressor compare
MPMX20_00746 -1.6 -2.4 Protein ApaG compare
MPMX20_00222 -1.6 -2.1 hypothetical protein compare
MPMX20_00106 -1.6 -1.1 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_00807 -1.6 -1.1 Pyruvate dehydrogenase E1 component compare
MPMX20_02475 -1.6 -2.4 Putrescine export system permease protein SapB compare
MPMX20_04385 -1.6 -4.3 hypothetical protein compare
MPMX20_04375 -1.6 -3.0 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_02885 -1.6 -3.5 hypothetical protein compare
MPMX20_01943 -1.6 -3.2 Protein SufA compare
MPMX20_01029 -1.6 -2.6 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_01950 -1.6 -1.1 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_04466 -1.6 -2.2 hypothetical protein compare
MPMX20_04115 -1.6 -6.0 Aerobic respiration control sensor protein ArcB compare
MPMX20_02020 -1.6 -4.4 Mannose-6-phosphate isomerase compare
MPMX20_02645 -1.6 -3.4 Ribosome-binding ATPase YchF compare
MPMX20_03752 -1.5 -5.1 Thiol:disulfide interchange protein DsbC compare
MPMX20_02766 -1.5 -1.5 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_02128 -1.5 -4.0 hypothetical protein compare
MPMX20_01065 -1.5 -3.5 Multidrug efflux pump subunit AcrA compare
MPMX20_01775 -1.5 -3.9 3-oxoacyl-[acyl-carrier-protein] synthase 2 compare
MPMX20_04399 -1.5 -4.6 Glutathione reductase compare
MPMX20_02307 -1.5 -1.5 hypothetical protein compare
MPMX20_01291 -1.5 -4.9 D-alanyl-D-alanine carboxypeptidase DacA compare
MPMX20_04480 -1.5 -5.2 UDP-N-acetyl-D-mannosaminuronic acid transferase compare


Specific Phenotypes

For 4 genes in this experiment

For mixed community LB plate, 1:1 coculture with Bacillus_zanthoxyli_TBS_055 in Enterobacter sp. TBS_079

For mixed community LB plate, 1:1 coculture with Bacillus_zanthoxyli_TBS_055 across organisms