Experiment set14IT056 for Klebsiella michiganensis M5al

Compare to:

LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS08380 +2.5 2.5 endonuclease VIII compare
BWI76_RS23895 +2.4 2.2 Xaa-Pro aminopeptidase compare
BWI76_RS01325 +2.0 2.9 twin-arginine translocase subunit TatB compare
BWI76_RS00345 +1.9 4.6 protein disulfide oxidoreductase DsbA compare
BWI76_RS09645 +1.9 1.0 thioredoxin-disulfide reductase compare
BWI76_RS02745 +1.8 1.8 hypothetical protein compare
BWI76_RS04715 +1.7 1.7 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS11815 +1.7 1.7 hypothetical protein compare
BWI76_RS01195 +1.7 1.9 membrane protein compare
BWI76_RS23520 +1.7 2.1 hypothetical protein compare
BWI76_RS08585 +1.7 2.5 nicotinamide riboside transporter PnuC compare
BWI76_RS19330 +1.6 1.1 HAD family hydrolase compare
BWI76_RS17390 +1.6 2.4 DsrE family protein compare
BWI76_RS21675 +1.6 0.9 hypothetical protein compare
BWI76_RS03045 +1.6 2.1 hypothetical protein compare
BWI76_RS00965 +1.6 0.9 acetolactate synthase 2 small subunit compare
BWI76_RS20785 +1.5 1.5 ethanolamine utilization protein EutJ compare
BWI76_RS03105 +1.5 1.2 myo-inosose-2 dehydratase compare
BWI76_RS14805 +1.5 2.4 hypothetical protein compare
BWI76_RS22095 +1.4 3.9 multidrug export protein EmrA compare
BWI76_RS12145 +1.4 0.9 hypothetical protein compare
BWI76_RS07725 +1.4 1.3 iron-enterobactin transporter permease compare
BWI76_RS16480 +1.4 1.5 lactoylglutathione lyase compare
BWI76_RS14075 +1.4 1.1 TetR family transcriptional regulator compare
BWI76_RS04515 +1.4 1.2 Co2+/Mg2+ efflux protein ApaG compare
BWI76_RS11700 +1.4 1.7 hypothetical protein compare
BWI76_RS17400 +1.3 1.3 transporter compare
BWI76_RS14925 +1.3 2.5 ABC transporter substrate-binding protein compare
BWI76_RS15800 +1.3 3.2 transcriptional regulator compare
BWI76_RS13800 +1.3 2.4 zinc-dependent alcohol dehydrogenase compare
BWI76_RS01205 +1.3 1.8 DUF484 family protein compare
BWI76_RS08260 +1.3 2.2 LysR family transcriptional regulator compare
BWI76_RS07165 +1.3 2.6 hypothetical protein compare
BWI76_RS11515 +1.3 1.1 peptide-methionine (R)-S-oxide reductase compare
BWI76_RS12545 +1.2 1.6 hypothetical protein compare
BWI76_RS05955 +1.2 2.6 ABC transporter compare
BWI76_RS20810 +1.2 3.3 ethanolamine utilization cobalamin adenosyltransferase compare
BWI76_RS05235 +1.2 0.9 hypothetical protein compare
BWI76_RS21325 +1.2 2.1 hypothetical protein compare
BWI76_RS01545 +1.2 2.0 thiamine biosynthesis protein ThiS compare
BWI76_RS18270 +1.2 2.3 hypothetical protein compare
BWI76_RS19585 +1.2 1.3 gentisate 1,2-dioxygenase compare
BWI76_RS23480 +1.2 6.1 EAL domain-containing protein compare
BWI76_RS19390 +1.2 2.0 LysR family transcriptional regulator compare
BWI76_RS10530 +1.2 1.7 GntR family transcriptional regulator with compare
BWI76_RS13155 +1.2 2.4 hypothetical protein compare
BWI76_RS17795 +1.2 2.4 ribonuclease D compare
BWI76_RS09450 +1.2 1.1 30S ribosomal protein S6--L-glutamate ligase compare
BWI76_RS19375 +1.1 1.0 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS17190 +1.1 1.4 TonB system transport protein TonB compare
BWI76_RS15975 +1.1 0.7 hypothetical protein compare
BWI76_RS01995 +1.1 1.3 AraC family transcriptional regulator compare
BWI76_RS07475 +1.1 1.3 DNA-binding transcriptional regulator RamA compare
BWI76_RS23580 +1.1 1.6 hypothetical protein compare
BWI76_RS24100 +1.1 1.7 YggS family pyridoxal phosphate enzyme compare
BWI76_RS23015 +1.1 1.4 cobalt transporter ATP-binding subunit compare
BWI76_RS00640 +1.1 2.3 L-rhamnose mutarotase compare
BWI76_RS24920 +1.1 1.0 YraN family protein compare
BWI76_RS09625 +1.1 0.8 hypothetical protein compare
BWI76_RS01650 +1.1 1.7 acetyltransferase compare
BWI76_RS11150 +1.1 1.1 membrane protein compare
BWI76_RS23705 +1.1 2.6 2-deoxy-D-ribonyl-CoA 3-dehydrogenase (from data) compare
BWI76_RS12470 +1.1 1.4 thiosulfate sulfurtransferase PspE compare
BWI76_RS23285 +1.1 1.6 hypothetical protein compare
BWI76_RS17675 +1.1 1.1 hypothetical protein compare
BWI76_RS15440 +1.1 2.5 hypothetical protein compare
BWI76_RS22450 +1.1 1.8 selenoprotein W-related protein compare
BWI76_RS16920 +1.1 1.0 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS24350 +1.0 1.9 quinol monooxygenase compare
BWI76_RS15940 +1.0 1.4 DMSO reductase maturation protein DsmD compare
BWI76_RS26875 +1.0 3.0 dipeptide ABC transporter permease DppC compare
BWI76_RS14020 +1.0 2.3 aspartate aminotransferase family protein compare
BWI76_RS08765 +1.0 1.3 8-amino-7-oxononanoate synthase compare
BWI76_RS18605 +1.0 1.3 oxidoreductase molybdopterin-binding protein compare
BWI76_RS25870 +1.0 1.0 elongation factor Tu compare
BWI76_RS13325 +1.0 2.1 dicarboxylate transporter/tellurite-resistance protein TehA compare
BWI76_RS19670 +1.0 1.6 S-formylglutathione hydrolase compare
BWI76_RS19360 +1.0 2.9 glucose dehydrogenase compare
BWI76_RS19310 +1.0 2.1 ABC transporter permease compare
BWI76_RS08545 +1.0 1.0 cell division protein CpoB compare
BWI76_RS01905 +1.0 0.8 envelope stress response protein PspG compare
BWI76_RS09540 +1.0 2.2 hypothetical protein compare
BWI76_RS20375 +1.0 1.2 membrane protein compare
BWI76_RS22040 +1.0 2.6 carboxymuconolactone decarboxylase family protein compare
BWI76_RS11950 +1.0 1.9 phosphatidylglycerophosphatase B compare
BWI76_RS23320 +1.0 1.0 hypothetical protein compare
BWI76_RS12755 +1.0 1.9 hypothetical protein compare
BWI76_RS21200 +1.0 1.7 aldose epimerase compare
BWI76_RS07545 +1.0 2.3 amidase compare
BWI76_RS23690 +1.0 1.0 putative glyoxalase/bleomycin resistance protein/dioxygenase compare
BWI76_RS11755 +1.0 2.2 catalase HPII compare
BWI76_RS11390 +1.0 1.5 iron dicitrate transport regulator FecR compare
BWI76_RS10400 +0.9 1.4 hypothetical protein compare
BWI76_RS19480 +0.9 1.1 transcriptional regulator compare
BWI76_RS05465 +0.9 0.8 amidohydrolase compare
BWI76_RS18800 +0.9 2.9 transcriptional regulator compare
BWI76_RS16295 +0.9 3.9 bifunctional PTS system maltose and glucose-specific transporter subunits IICB compare
BWI76_RS16760 +0.9 2.7 lipase compare
BWI76_RS04525 +0.9 1.0 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS11235 +0.9 1.0 hypothetical protein compare
BWI76_RS22625 +0.9 0.8 transcriptional regulator compare
BWI76_RS08975 +0.9 2.0 amino acid ABC transporter substrate-binding protein compare
BWI76_RS14625 +0.9 1.1 protein TolA compare
BWI76_RS01235 +0.9 1.8 hypothetical protein compare
BWI76_RS13380 +0.9 1.2 hypothetical protein compare
BWI76_RS25915 +0.9 1.8 protein SlyX compare
BWI76_RS20230 +0.9 0.9 hypothetical protein compare
BWI76_RS06070 +0.9 2.8 taurine transporter ATP-binding subunit compare
BWI76_RS21275 +0.9 3.1 lytic transglycosylase F compare
BWI76_RS13220 +0.9 1.9 N-acetyltransferase compare
BWI76_RS01935 +0.9 1.1 thiamin phosphate synthase compare
BWI76_RS07985 +0.9 0.7 fluoride ion transporter CrcB compare
BWI76_RS03665 +0.9 1.2 ABC transporter ATP-binding protein compare
BWI76_RS17830 +0.9 2.2 ABC transporter ATP-binding protein compare
BWI76_RS07645 +0.9 1.0 short-chain dehydrogenase/reductase compare
BWI76_RS14820 +0.9 1.3 LysR family transcriptional regulator compare
BWI76_RS06470 +0.9 1.6 hypothetical protein compare
BWI76_RS11640 +0.9 2.8 ABC transporter membrane protein compare
BWI76_RS23195 +0.9 1.5 ethanolamine utilization protein EutP compare
BWI76_RS06200 +0.9 1.7 hypothetical protein compare
BWI76_RS21685 +0.9 0.6 hypothetical protein compare
BWI76_RS18670 +0.9 2.4 hypothetical protein compare
BWI76_RS16300 +0.9 1.5 bifunctional beta-cystathionase/maltose regulon regulatory protein compare
BWI76_RS15895 +0.9 3.2 starvation-sensing protein RspA compare
BWI76_RS20795 +0.9 0.9 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS23820 +0.9 1.6 flavodoxin FldB compare
BWI76_RS10275 +0.9 3.5 ABC transporter compare
BWI76_RS16570 +0.9 1.4 catalase compare
BWI76_RS12465 +0.9 0.9 phage shock protein D compare
BWI76_RS10840 +0.9 1.6 membrane protein compare
BWI76_RS17970 +0.9 1.8 zinc metalloprotease HtpX compare
BWI76_RS11865 +0.8 1.2 phosphatase compare
BWI76_RS16160 +0.8 1.3 LysR family transcriptional regulator compare
BWI76_RS13930 +0.8 3.2 putative LysR-family transcriptional regulator compare
BWI76_RS18615 +0.8 2.8 glutathione S-transferase domain protein compare
BWI76_RS13685 +0.8 1.3 IclR family transcriptional regulator compare
BWI76_RS19240 +0.8 1.0 ABC transporter substrate-binding protein compare
BWI76_RS16015 +0.8 1.6 pheromone autoinducer 2 transporter compare
BWI76_RS12100 +0.8 2.2 replication protein P compare
BWI76_RS13785 +0.8 0.8 ABC transporter permease compare
BWI76_RS19205 +0.8 1.8 putative proline iminopeptidase compare
BWI76_RS21380 +0.8 1.7 uracil-DNA glycosylase compare
BWI76_RS19700 +0.8 0.4 deoxyribonuclease IV compare
BWI76_RS21795 +0.8 1.1 EAL domain-containing protein compare
BWI76_RS00325 +0.8 3.3 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
BWI76_RS05060 +0.8 1.7 type II secretion system protein GspJ compare
BWI76_RS17805 +0.8 0.6 membrane protein compare
BWI76_RS17765 +0.8 1.0 hypothetical protein compare
BWI76_RS23860 +0.8 1.3 protein disulfide oxidoreductase compare
BWI76_RS06815 +0.8 1.7 adenine phosphoribosyltransferase compare
BWI76_RS09750 +0.8 3.3 DUF421 domain-containing protein compare
BWI76_RS12780 +0.8 1.1 hypothetical protein compare
BWI76_RS24955 +0.8 1.4 hypothetical protein compare
BWI76_RS25485 +0.8 1.0 septum formation protein Maf compare
BWI76_RS00355 +0.8 1.0 DNA polymerase I compare
BWI76_RS06540 +0.8 1.5 DNA-binding protein HU-beta compare
BWI76_RS15295 +0.8 1.9 MDR efflux pump AcrAB transcriptional activator MarA compare
BWI76_RS20900 +0.8 0.6 outer membrane protein assembly factor BamC compare
BWI76_RS27735 +0.8 2.4 hypothetical protein compare
BWI76_RS24240 +0.8 1.6 hypothetical protein compare
BWI76_RS11610 +0.8 0.7 glutamate dehydrogenase compare
BWI76_RS14735 +0.8 2.1 type 11 methyltransferase compare
BWI76_RS18580 +0.8 0.7 hypothetical protein compare
BWI76_RS06880 +0.8 2.0 biopolymer transport protein ExbD/TolR compare
BWI76_RS08510 +0.8 1.8 cyd operon protein YbgE compare
BWI76_RS27505 +0.8 1.2 septal ring assembly protein ZapB compare
BWI76_RS19215 +0.8 0.8 proline-specific peptidase compare
BWI76_RS15725 +0.8 1.3 hypothetical protein compare
BWI76_RS16220 +0.8 0.9 hypothetical protein compare
BWI76_RS02655 +0.8 1.5 hypothetical protein compare
BWI76_RS13890 +0.8 1.2 LysR family transcriptional regulator compare
BWI76_RS25545 +0.8 1.6 hypothetical protein compare
BWI76_RS04155 +0.8 2.8 membrane protein compare
BWI76_RS06180 +0.8 1.6 hypothetical protein compare
BWI76_RS04175 +0.8 1.1 energy-dependent translational throttle protein EttA compare
BWI76_RS04840 +0.8 1.6 prepilin peptidase-dependent pilin compare
BWI76_RS24680 +0.8 2.4 23S rRNA (guanine(1835)-N(2))-methyltransferase compare
BWI76_RS00825 +0.7 2.8 AraC family transcriptional regulator compare
BWI76_RS05800 +0.7 1.2 phage transcriptional activator, Ogr/delta compare
BWI76_RS19465 +0.7 1.0 hypothetical protein compare
BWI76_RS10835 +0.7 0.6 hypothetical protein compare
BWI76_RS25220 +0.7 1.1 outer membrane lipid asymmetry maintenance protein MlaD compare
BWI76_RS02595 +0.7 1.4 hypothetical protein compare
BWI76_RS11790 +0.7 1.2 acyl-CoA thioesterase compare
BWI76_RS19785 +0.7 1.4 microcin C ABC transporter permease YejB compare
BWI76_RS02860 +0.7 1.8 glycine dehydrogenase compare
BWI76_RS21130 +0.7 1.0 Fe-S assembly protein IscX compare
BWI76_RS06425 +0.7 2.6 MFS transporter compare
BWI76_RS04200 +0.7 1.4 phosphoglycerate mutase GpmB compare
BWI76_RS16915 +0.7 1.8 alpha/beta hydrolase fold protein compare
BWI76_RS06335 +0.7 1.1 nucleoside-specific channel-forming protein Tsx compare
BWI76_RS14670 +0.7 0.8 hypothetical protein compare
BWI76_RS26120 +0.7 2.0 hypothetical protein compare
BWI76_RS27175 +0.7 1.2 hypothetical protein compare
BWI76_RS05700 +0.7 1.5 coenzyme F420-dependent NADP oxidoreductase compare
BWI76_RS08615 +0.7 2.6 galactokinase compare
BWI76_RS12095 +0.7 2.7 hypothetical protein compare
BWI76_RS15290 +0.7 0.6 transcriptional regulator compare
BWI76_RS24075 +0.7 1.1 glutathione synthase compare
BWI76_RS20050 +0.7 0.9 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in mixed community experiments

For mixed community Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL across organisms