Experiment set14IT027 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS07985 +3.4 3.9 fluoride ion transporter CrcB compare
BWI76_RS20750 +1.8 1.2 carboxysome structural protein EutK compare
BWI76_RS20375 +1.8 2.6 membrane protein compare
BWI76_RS15975 +1.8 1.4 hypothetical protein compare
BWI76_RS02180 +1.7 2.5 hypothetical protein compare
BWI76_RS21340 +1.7 2.3 SoxR reducing system protein RseC compare
BWI76_RS23895 +1.6 1.6 Xaa-Pro aminopeptidase compare
BWI76_RS04715 +1.6 2.6 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS19375 +1.6 1.8 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS03045 +1.6 2.5 hypothetical protein compare
BWI76_RS16095 +1.6 2.3 thiamine biosynthesis protein ApbE compare
BWI76_RS26440 +1.5 1.7 hypothetical protein compare
BWI76_RS25285 +1.5 1.5 HPr family phosphocarrier protein compare
BWI76_RS08605 +1.5 1.8 phosphoglyceromutase compare
BWI76_RS11680 +1.4 3.3 succinylglutamate-semialdehyde dehydrogenase compare
BWI76_RS07740 +1.4 1.7 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS11675 +1.4 2.7 arginine N-succinyltransferase compare
BWI76_RS06745 +1.4 2.9 N-acetyltransferase GCN5 compare
BWI76_RS00025 +1.3 1.3 hypothetical protein compare
BWI76_RS02745 +1.3 1.5 hypothetical protein compare
BWI76_RS16035 +1.3 2.8 biotin-independent malonate decarboxylase subunit beta compare
BWI76_RS15940 +1.3 2.3 DMSO reductase maturation protein DsmD compare
BWI76_RS18605 +1.3 1.3 oxidoreductase molybdopterin-binding protein compare
BWI76_RS14435 +1.3 1.8 glutamine ABC transporter ATP-binding protein compare
BWI76_RS07865 +1.3 3.2 methylthioribulose 1-phosphate dehydratase compare
BWI76_RS20360 +1.3 0.9 cell division protein DedD compare
BWI76_RS06880 +1.3 2.8 biopolymer transport protein ExbD/TolR compare
BWI76_RS23690 +1.2 1.7 putative glyoxalase/bleomycin resistance protein/dioxygenase compare
BWI76_RS15360 +1.2 2.7 hypothetical protein compare
BWI76_RS00690 +1.2 3.0 transcriptional activator RhaS compare
BWI76_RS15035 +1.1 1.2 metal ABC transporter permease compare
BWI76_RS24925 +1.1 1.9 DnaA initiator-associating protein DiaA compare
BWI76_RS23970 +1.1 1.5 mechanosensitive ion channel protein MscS compare
BWI76_RS20925 +1.1 3.3 peptidase M48 compare
BWI76_RS26665 +1.1 2.1 DNA-binding response regulator compare
BWI76_RS15775 +1.1 2.0 replication protein compare
BWI76_RS16315 +1.1 1.2 SirA-like protein compare
BWI76_RS01585 +1.1 4.9 transcriptional regulator compare
BWI76_RS17615 +1.1 2.9 RNA pseudouridine synthase compare
BWI76_RS16360 +1.1 1.0 electron transport complex subunit RsxB compare
BWI76_RS15980 +1.0 2.2 lysine transporter LysE compare
BWI76_RS10295 +1.0 3.0 short chain dehydrogenase/reductase family oxidoreductase compare
BWI76_RS14680 +1.0 1.9 SefF compare
BWI76_RS22450 +1.0 2.1 selenoprotein W-related protein compare
BWI76_RS07255 +1.0 2.0 hypothetical protein compare
BWI76_RS12420 +1.0 1.0 peptide ABC transporter substrate-binding protein SapA compare
BWI76_RS10725 +1.0 2.8 hypothetical protein compare
BWI76_RS14775 +1.0 2.3 creatinine amidohydrolase compare
BWI76_RS11790 +1.0 2.1 acyl-CoA thioesterase compare
BWI76_RS19495 +1.0 0.9 ABC transporter, quaternary amine uptake transporter (QAT) family, ATP-binding protein compare
BWI76_RS25600 +1.0 0.7 tRNA-Thr compare
BWI76_RS20800 +1.0 1.8 carboxysome shell protein compare
BWI76_RS04875 +1.0 4.8 transcriptional regulator PdhR compare
BWI76_RS01330 +1.0 3.6 twin-arginine translocase subunit TatC compare
BWI76_RS20340 +1.0 1.5 histidine ABC transporter substrate-binding protein HisJ compare
BWI76_RS16160 +1.0 1.9 LysR family transcriptional regulator compare
BWI76_RS04850 +1.0 1.8 N-acetylmuramoyl-L-alanine amidase compare
BWI76_RS03845 +1.0 4.5 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase compare
BWI76_RS17735 +1.0 2.8 D-amino acid dehydrogenase small subunit compare
BWI76_RS15925 +1.0 2.7 dimethyl sulfoxide reductase subunit A compare
BWI76_RS09515 +1.0 2.3 arginine ABC transporter substrate-binding protein compare
BWI76_RS10500 +1.0 1.6 flavoprotein monooxygenase compare
BWI76_RS03040 +1.0 2.5 leucyl aminopeptidase compare
BWI76_RS17970 +1.0 2.3 zinc metalloprotease HtpX compare
BWI76_RS13685 +1.0 1.9 IclR family transcriptional regulator compare
BWI76_RS03595 +1.0 1.2 ethanolamine utilization protein EutM compare
BWI76_RS17190 +1.0 1.0 TonB system transport protein TonB compare
BWI76_RS14540 +1.0 1.3 yersiniabactin biosynthetic protein YbtU compare
BWI76_RS19540 +1.0 4.9 multidrug transporter permease compare
BWI76_RS12235 +1.0 2.1 hypothetical protein compare
BWI76_RS16290 +1.0 2.3 Mal regulon transcriptional regulator MalI compare
BWI76_RS12825 +1.0 2.1 hypothetical protein compare
BWI76_RS16760 +0.9 2.2 lipase compare
BWI76_RS09710 +0.9 1.8 transketolase compare
BWI76_RS08840 +0.9 1.7 hypothetical protein compare
BWI76_RS14825 +0.9 1.1 dienelactone hydrolase family protein compare
BWI76_RS10890 +0.9 2.8 glyoxylate/hydroxypyruvate reductase A compare
BWI76_RS08515 +0.9 1.5 acyl-CoA thioesterase YbgC compare
BWI76_RS17200 +0.9 1.9 hypothetical protein compare
BWI76_RS09195 +0.9 0.9 N-acetyltransferase compare
BWI76_RS06080 +0.9 1.7 taurine dioxygenase compare
BWI76_RS23195 +0.9 2.4 ethanolamine utilization protein EutP compare
BWI76_RS11805 +0.9 1.8 hypothetical protein compare
BWI76_RS01205 +0.9 1.4 DUF484 family protein compare
BWI76_RS12735 +0.9 2.4 phage repressor protein compare
BWI76_RS04050 +0.9 2.5 hydroxamate siderophore iron reductase FhuF compare
BWI76_RS12520 +0.9 2.4 hypothetical protein compare
BWI76_RS23250 +0.9 1.4 hypothetical protein compare
BWI76_RS10815 +0.9 2.5 iron permease compare
BWI76_RS09540 +0.9 2.2 hypothetical protein compare
BWI76_RS13320 +0.9 1.2 putative LpxA-like enzyme compare
BWI76_RS26965 +0.9 2.8 hypothetical protein compare
BWI76_RS15295 +0.9 2.4 MDR efflux pump AcrAB transcriptional activator MarA compare
BWI76_RS10530 +0.9 1.5 GntR family transcriptional regulator with compare
BWI76_RS19530 +0.9 2.5 YIP1 family protein compare
BWI76_RS05965 +0.9 1.5 hypothetical protein compare
BWI76_RS22650 +0.9 3.6 lipoprotein NlpD compare
BWI76_RS27450 +0.9 3.3 ferredoxin--NADP(+) reductase compare
BWI76_RS01995 +0.9 1.2 AraC family transcriptional regulator compare
BWI76_RS19465 +0.9 1.3 hypothetical protein compare
BWI76_RS07725 +0.9 0.9 iron-enterobactin transporter permease compare
BWI76_RS17045 +0.9 1.1 hypothetical protein compare
BWI76_RS14805 +0.9 1.4 hypothetical protein compare
BWI76_RS22215 +0.9 2.7 PTS sorbitol transporter subunit IIC compare
BWI76_RS17500 +0.9 2.0 knotted carbamoyltransferase YgeW compare
BWI76_RS11255 +0.8 0.8 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS06740 +0.8 2.6 50S ribosomal protein L36 compare
BWI76_RS11820 +0.8 1.1 short-chain dehydrogenase/reductase SDR compare
BWI76_RS15015 +0.8 0.8 DUF2132 domain-containing protein compare
BWI76_RS03610 +0.8 1.5 hypothetical protein compare
BWI76_RS01285 +0.8 2.7 amino acid ABC transporter substrate-binding protein compare
BWI76_RS20730 +0.8 1.1 hypothetical protein compare
BWI76_RS22300 +0.8 1.6 hydrogenase 3 maturation endopeptidase HyCI compare
BWI76_RS03105 +0.8 0.7 myo-inosose-2 dehydratase compare
BWI76_RS22200 +0.8 3.0 iron ABC transporter compare
BWI76_RS14770 +0.8 0.8 PTS IIA 2 domain protein compare
BWI76_RS19480 +0.8 2.4 transcriptional regulator compare
BWI76_RS25000 +0.8 1.0 malonate decarboxylase acyl carrier protein compare
BWI76_RS11150 +0.8 1.0 membrane protein compare
BWI76_RS12975 +0.8 3.1 type I glyceraldehyde-3-phosphate dehydrogenase compare
BWI76_RS05235 +0.8 0.6 hypothetical protein compare
BWI76_RS08780 +0.8 1.6 ABC transporter compare
BWI76_RS25980 +0.8 2.2 hypothetical protein compare
BWI76_RS23050 +0.8 1.4 cobalt-precorrin-3B C(17)-methyltransferase compare
BWI76_RS20050 +0.8 1.3 hypothetical protein compare
BWI76_RS18550 +0.8 1.1 tRNA-Asn compare
BWI76_RS27240 +0.8 4.1 hypothetical protein compare
BWI76_RS06280 +0.8 3.3 hypothetical protein compare
BWI76_RS05430 +0.8 2.3 UbiE/COQ5 family methyltransferase compare
BWI76_RS06225 +0.8 2.6 exonuclease sbcCD subunit D compare
BWI76_RS05010 +0.8 1.4 tRNA glutamyl-Q synthetase compare
BWI76_RS24585 +0.8 1.9 glycerol dehydrogenase compare
BWI76_RS10585 +0.8 2.2 amino acid ABC transporter ATP-binding protein compare
BWI76_RS22110 +0.8 3.2 putative helix-turn-helix AraC-type transcriptional regulator compare
BWI76_RS11645 +0.8 2.5 ABC transporter substrate-binding protein compare
BWI76_RS16055 +0.8 2.5 malonate decarboxylase subunit epsilon compare
BWI76_RS04060 +0.8 1.3 hypothetical protein compare
BWI76_RS04770 +0.8 2.2 D-alanine--D-alanine ligase compare
BWI76_RS08250 +0.8 2.0 tricarballylate utilization protein B compare
BWI76_RS24825 +0.8 1.7 2-hydroxy-3-oxopropionate reductase compare
BWI76_RS27235 +0.8 3.8 murein hydrolase activator EnvC compare
BWI76_RS02725 +0.8 0.6 HxlR family transcriptional regulator compare
BWI76_RS09475 +0.8 1.9 putrescine ABC transporter permease PotI compare
BWI76_RS11920 +0.8 2.0 hypothetical protein compare
BWI76_RS10680 +0.8 2.6 tartrate dehydrogenase compare
BWI76_RS12545 +0.7 1.0 hypothetical protein compare
BWI76_RS23965 +0.7 2.3 arginine exporter protein compare
BWI76_RS12755 +0.7 1.7 hypothetical protein compare
BWI76_RS02625 +0.7 1.8 PTS ascorbate transporter subunit IIB compare
BWI76_RS19610 +0.7 2.2 Cytidine deaminase (EC 3.5.4.5) (from data) compare
BWI76_RS26095 +0.7 0.4 shikimate kinase compare
BWI76_RS00725 +0.7 0.7 periplasmic repressor CpxP compare
BWI76_RS25225 +0.7 3.0 ABC transporter permease compare
BWI76_RS24260 +0.7 2.0 hypothetical protein compare
BWI76_RS00335 +0.7 1.7 hypothetical protein compare
BWI76_RS12910 +0.7 2.3 3,4-dihydroxyphenylacetate 2,3-dioxygenase compare
BWI76_RS05445 +0.7 2.2 type 11 methyltransferase compare
BWI76_RS04515 +0.7 0.7 Co2+/Mg2+ efflux protein ApaG compare
BWI76_RS09115 +0.7 1.9 30S ribosomal protein S12 methylthiotransferase RimO compare
BWI76_RS00825 +0.7 3.4 AraC family transcriptional regulator compare
BWI76_RS10750 +0.7 2.4 pyrimidine utilization transport protein G compare
BWI76_RS21945 +0.7 1.1 LysR family transcriptional regulator compare
BWI76_RS21885 +0.7 3.3 AP endonuclease, family 2 compare
BWI76_RS00140 +0.7 0.8 phosphate transport system regulator PhoU compare
BWI76_RS25365 +0.7 3.8 serine endoprotease DegQ compare
BWI76_RS00760 +0.7 1.4 cell division protein FtsN compare
BWI76_RS16025 +0.7 1.5 triphosphoribosyl-dephospho-CoA synthase compare
BWI76_RS10070 +0.7 1.7 BAX inhibitor protein compare
BWI76_RS03760 +0.7 2.0 hypothetical protein compare
BWI76_RS23255 +0.7 2.5 prepilin-type cleavage/methylation domain-containing protein compare
BWI76_RS21195 +0.7 2.8 3-phenylpropionic acid transporter compare
BWI76_RS19935 +0.7 0.9 hypothetical protein compare
BWI76_RS05790 +0.7 0.7 phage DNA-binding protein compare
BWI76_RS12615 +0.7 2.5 LysR family transcriptional regulator compare
BWI76_RS24110 +0.7 0.8 YggU family protein compare
BWI76_RS10855 +0.7 2.0 RND family efflux transporter MFP subunit compare
BWI76_RS15790 +0.7 1.4 replication protein compare
BWI76_RS21755 +0.7 3.0 hypothetical protein compare
BWI76_RS19700 +0.7 0.9 deoxyribonuclease IV compare
BWI76_RS06015 +0.7 0.8 hypothetical protein compare
BWI76_RS08315 +0.7 1.9 K+-transporting ATPase subunit B compare
BWI76_RS24945 +0.7 1.0 glutamine amidotransferase compare
BWI76_RS18830 +0.7 1.9 protein NifY compare
BWI76_RS01600 +0.7 2.5 sensor protein ZraS compare
BWI76_RS16475 +0.7 1.8 alkene reductase compare
BWI76_RS16630 +0.7 2.4 MBL fold metallo-hydrolase compare
BWI76_RS14225 +0.7 1.9 anti-ECF sigma factor ChrR compare
BWI76_RS14975 +0.7 2.6 glyoxalase-like domain protein compare
BWI76_RS23915 +0.7 0.4 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS03560 +0.7 1.4 propanediol utilization phosphotransacylase compare
BWI76_RS13415 +0.7 1.6 spermidine/putrescine ABC transporter permease compare
BWI76_RS13980 +0.7 0.8 hypothetical protein compare
BWI76_RS04565 +0.7 1.7 bifunctional tRNA pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase RluA compare
BWI76_RS14035 +0.7 2.3 ABC transporter ATPase compare
BWI76_RS01675 +0.7 1.5 putative cytoplasmic protein compare
BWI76_RS13630 +0.7 2.3 ABC transporter compare
BWI76_RS20985 +0.7 1.7 glycosyl hydrolase family protein compare
BWI76_RS13245 +0.7 1.0 DNA-damage-inducible protein I compare
BWI76_RS18800 +0.7 2.4 transcriptional regulator compare
BWI76_RS11400 +0.7 2.7 SAM-dependent methyltransferase compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in mixed community experiments

For mixed community Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella across organisms