Experiment set13IT041 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

200 most important genes:

  gene name fitness t score description  
BWI76_RS18950 -7.2 -4.3 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS18920 -5.5 -3.3 ATP phosphoribosyltransferase compare
BWI76_RS17975 -4.5 -4.4 tail-specific protease compare
BWI76_RS26455 -4.4 -1.9 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS23265 -4.3 -1.9 hypothetical protein compare
BWI76_RS09760 -4.1 -2.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS19840 -4.1 -1.3 hypothetical protein compare
BWI76_RS26460 -4.1 -4.7 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS03010 -4.1 -9.8 ornithine carbamoyltransferase compare
BWI76_RS22755 -4.0 -2.8 phosphoadenosine phosphosulfate reductase compare
BWI76_RS00785 -4.0 -6.6 cystathionine gamma-synthase compare
BWI76_RS04250 -3.9 -6.3 homoserine kinase compare
BWI76_RS00845 -3.9 -8.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS11845 -3.8 -1.3 tryptophan synthase subunit beta compare
BWI76_RS05015 -3.7 -2.3 transcriptional regulator compare
BWI76_RS04255 -3.7 -10.6 threonine synthase compare
BWI76_RS05840 -3.7 -2.6 glutamate 5-kinase compare
BWI76_RS23220 -3.7 -7.7 amino-acid N-acetyltransferase compare
BWI76_RS16965 -3.7 -2.2 murein lipoprotein compare
BWI76_RS00835 -3.7 -14.2 phosphoenolpyruvate carboxylase compare
BWI76_RS25645 -3.6 -5.0 shikimate dehydrogenase compare
BWI76_RS08520 -3.6 -1.9 colicin transporter TolQ compare
BWI76_RS20350 -3.6 -6.9 amidophosphoribosyltransferase compare
BWI76_RS04240 -3.6 -2.0 thr operon leader peptide compare
BWI76_RS01615 -3.6 -9.4 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS09335 -3.6 -1.1 baseplate assembly protein W compare
BWI76_RS00875 -3.5 -4.8 DNA-binding transcriptional regulator FabR compare
BWI76_RS25960 -3.5 -2.4 NUDIX hydrolase compare
BWI76_RS23365 -3.5 -3.0 LysR family transcriptional regulator compare
BWI76_RS17190 -3.5 -2.5 TonB system transport protein TonB compare
BWI76_RS18935 -3.5 -9.3 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS11300 -3.4 -1.0 cupin compare
BWI76_RS20965 -3.4 -3.4 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS00990 -3.4 -9.3 ketol-acid reductoisomerase compare
BWI76_RS07070 -3.4 -4.2 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS08535 -3.3 -1.8 translocation protein TolB compare
BWI76_RS24285 -3.3 -6.8 cystathionine beta-lyase compare
BWI76_RS09645 -3.3 -1.0 thioredoxin-disulfide reductase compare
BWI76_RS11965 -3.3 -3.2 orotidine-5'-phosphate decarboxylase compare
BWI76_RS20750 -3.3 -1.0 carboxysome structural protein EutK compare
BWI76_RS20355 -3.3 -2.9 colicin V production protein compare
BWI76_RS27385 -3.2 -6.8 orotate phosphoribosyltransferase compare
BWI76_RS04675 -3.2 -5.7 3-isopropylmalate dehydrogenase compare
BWI76_RS02995 -3.2 -5.8 aspartate carbamoyltransferase compare
BWI76_RS00855 -3.1 -10.3 argininosuccinate lyase compare
BWI76_RS00975 -3.1 -7.6 dihydroxy-acid dehydratase compare
BWI76_RS25335 -3.1 -1.5 stringent starvation protein A compare
BWI76_RS01610 -3.1 -10.2 phosphoribosylamine--glycine ligase compare
BWI76_RS10990 -3.1 -2.2 dihydroorotase compare
BWI76_RS19375 -3.1 -1.8 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS18955 -3.0 -5.1 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS08530 -3.0 -1.3 protein TolA compare
BWI76_RS17980 -3.0 -3.7 RNA chaperone ProQ compare
BWI76_RS26390 -3.0 -6.7 cell division protein FtsX compare
BWI76_RS04470 -3.0 -8.8 carbamoyl phosphate synthase large subunit compare
BWI76_RS09755 -2.9 -2.0 phosphoserine transaminase compare
BWI76_RS09910 -2.9 -15.3 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS05835 -2.9 -1.8 gamma-glutamyl-phosphate reductase compare
BWI76_RS22760 -2.9 -5.9 sulfite reductase subunit beta compare
BWI76_RS19770 -2.9 -1.2 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS18930 -2.9 -3.2 histidinol-phosphate transaminase compare
BWI76_RS00850 -2.8 -5.6 acetylglutamate kinase compare
BWI76_RS04245 -2.8 -12.3 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS21265 -2.8 -10.1 phosphoribosylformylglycinamidine synthase compare
BWI76_RS20440 -2.8 -2.7 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS24740 -2.8 -2.8 GntR family transcriptional regulator compare
BWI76_RS04465 -2.8 -4.5 carbamoyl-phosphate synthase small subunit compare
BWI76_RS04670 -2.8 -7.3 3-isopropylmalate dehydratase large subunit compare
BWI76_RS00980 -2.7 -9.8 PLP-dependent threonine dehydratase compare
BWI76_RS25115 -2.7 -6.6 argininosuccinate synthase compare
BWI76_RS18925 -2.7 -5.7 histidinol dehydrogenase compare
BWI76_RS01095 -2.7 -2.0 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS07065 -2.7 -5.0 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS26570 -2.7 -1.8 anion permease compare
BWI76_RS13755 -2.7 -1.1 hypothetical protein compare
BWI76_RS22765 -2.6 -8.8 sulfite reductase subunit alpha compare
BWI76_RS21075 -2.6 -1.3 membrane protein compare
BWI76_RS20360 -2.6 -0.8 cell division protein DedD compare
BWI76_RS20895 -2.6 -3.2 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS04665 -2.6 -14.1 3-isopropylmalate dehydratase small subunit compare
BWI76_RS11850 -2.6 -8.3 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS18940 -2.6 -4.6 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS11840 -2.6 -4.7 tryptophan synthase subunit alpha compare
BWI76_RS23360 -2.5 -1.5 diaminopimelate decarboxylase compare
BWI76_RS01800 -2.5 -1.7 glucose-6-phosphate isomerase compare
BWI76_RS00985 -2.5 -6.1 transcriptional regulator IlvY compare
BWI76_RS09970 -2.4 -0.9 porin OmpA compare
BWI76_RS04685 -2.4 -6.1 putative leucine operon leader peptide compare
BWI76_RS21475 -2.4 -3.2 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS05260 -2.4 -1.0 chaperone compare
BWI76_RS15835 -2.3 -2.4 hypothetical protein compare
BWI76_RS01655 -2.3 -4.6 homoserine O-succinyltransferase compare
BWI76_RS11860 -2.3 -6.4 anthranilate synthase component I compare
BWI76_RS12265 -2.3 -5.3 hypothetical protein compare
BWI76_RS21070 -2.3 -1.3 outer membrane protein assembly factor BamB compare
BWI76_RS27390 -2.2 -4.1 ribonuclease PH compare
BWI76_RS06680 -2.2 -1.2 hypothetical protein compare
BWI76_RS04680 -2.2 -8.2 2-isopropylmalate synthase compare
BWI76_RS08525 -2.2 -2.2 colicin transporter compare
BWI76_RS08210 -2.2 -0.9 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS26395 -2.2 -5.9 cell division protein FtsE compare
BWI76_RS01080 -2.2 -5.5 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS16355 -2.1 -2.2 electron transport complex subunit A compare
BWI76_RS00805 -2.1 -2.8 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS11895 -2.1 -2.5 AraC family transcriptional regulator compare
BWI76_RS01210 -2.1 -1.1 tyrosine recombinase XerC compare
BWI76_RS05450 -2.1 -0.8 ribonuclease HI compare
BWI76_RS25065 -2.1 -3.3 polyribonucleotide nucleotidyltransferase compare
BWI76_RS24580 -2.1 -3.6 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS07115 -2.1 -4.9 hypothetical protein compare
BWI76_RS04705 -2.1 -3.1 DNA-binding transcriptional regulator FruR compare
BWI76_RS01115 -2.1 -1.9 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS04645 -2.0 -2.7 3-dehydroquinase compare
BWI76_RS21350 -2.0 -2.0 anti-RNA polymerase sigma factor SigE compare
BWI76_RS24595 -2.0 -2.7 dihydroxyacetone kinase subunit DhaK compare
BWI76_RS01220 -2.0 -4.8 DNA-dependent helicase II compare
BWI76_RS14390 -2.0 -1.2 hypothetical protein compare
BWI76_RS01630 -2.0 -0.8 16S ribosomal RNA compare
BWI76_RS21340 -2.0 -1.3 SoxR reducing system protein RseC compare
BWI76_RS21260 -1.9 -6.0 two-component sensor histidine kinase compare
BWI76_RS24605 -1.9 -4.0 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS26055 -1.9 -6.2 siroheme synthase compare
BWI76_RS27440 -1.9 -1.3 DNA helicase RecG compare
BWI76_RS20280 -1.9 -2.5 phosphodiesterase compare
BWI76_RS09670 -1.9 -2.6 recombination factor protein RarA compare
BWI76_RS26175 -1.9 -3.3 DeoR/GlpR family transcriptional regulator compare
BWI76_RS02735 -1.9 -2.0 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS16275 -1.9 -2.2 fumarate hydratase FumA compare
BWI76_RS25300 -1.9 -2.2 hybrid sensor histidine kinase/response regulator compare
BWI76_RS10935 -1.8 -3.5 glucan biosynthesis glucosyltransferase H compare
BWI76_RS21570 -1.8 -1.6 RnfH family protein compare
BWI76_RS02340 -1.8 -3.2 membrane protein FxsA compare
BWI76_RS24885 -1.8 -0.9 PTS galactitol transporter subunit IIB compare
BWI76_RS00400 -1.8 -0.9 glutamine synthetase compare
BWI76_RS15635 -1.8 -5.0 hypothetical protein compare
BWI76_RS05120 -1.8 -5.7 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS11170 -1.8 -0.9 hypothetical protein compare
BWI76_RS11440 -1.8 -0.9 hypothetical protein compare
BWI76_RS09730 -1.8 -0.8 pyruvate formate lyase 1-activating protein compare
BWI76_RS01885 -1.8 -1.3 CsbD family protein compare
BWI76_RS23480 -1.8 -10.2 EAL domain-containing protein compare
BWI76_RS04160 -1.8 -2.2 phosphoserine phosphatase compare
BWI76_RS09655 -1.8 -4.5 leucine-responsive regulatory protein compare
BWI76_RS11855 -1.7 -4.2 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS08405 -1.7 -2.0 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS16425 -1.7 -3.0 hypothetical protein compare
BWI76_RS20785 -1.7 -0.9 ethanolamine utilization protein EutJ compare
BWI76_RS01090 -1.7 -3.1 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS08395 -1.7 -1.2 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS22805 -1.7 -5.4 GTP diphosphokinase compare
BWI76_RS17720 -1.7 -0.5 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS12170 -1.7 -1.5 hypothetical protein compare
BWI76_RS21115 -1.7 -1.8 3-mercaptopyruvate sulfurtransferase compare
BWI76_RS00240 -1.7 -1.0 FMN-binding protein MioC compare
BWI76_RS08385 -1.7 -0.9 citrate (Si)-synthase compare
BWI76_RS09200 -1.6 -4.0 hypothetical protein compare
BWI76_RS09190 -1.6 -1.1 hypothetical protein compare
BWI76_RS17290 -1.6 -4.2 formyltetrahydrofolate deformylase compare
BWI76_RS03225 -1.6 -4.8 transcriptional regulator compare
BWI76_RS07465 -1.6 -0.9 TetR family transcriptional regulator compare
BWI76_RS15110 -1.6 -2.5 putative excinuclease ABC subunit A compare
BWI76_RS11635 -1.6 -1.1 ABC transporter compare
BWI76_RS12405 -1.6 -4.1 diguanylate phosphodiesterase compare
BWI76_RS09255 -1.6 -2.4 hypothetical protein compare
BWI76_RS10735 -1.6 -1.8 hypothetical protein compare
BWI76_RS08430 -1.6 -3.8 succinate--CoA ligase subunit alpha compare
BWI76_RS21310 -1.6 -0.6 DNA repair protein RecO compare
BWI76_RS16210 -1.6 -1.3 hypothetical protein compare
BWI76_RS26470 -1.5 -2.5 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
BWI76_RS24075 -1.5 -2.8 glutathione synthase compare
BWI76_RS26000 -1.5 -4.1 aspartate aminotransferase family protein compare
BWI76_RS26670 -1.5 -6.3 two-component sensor histidine kinase compare
BWI76_RS12070 -1.5 -0.9 hypothetical protein compare
BWI76_RS25920 -1.5 -1.0 peptidylprolyl isomerase compare
BWI76_RS26635 -1.5 -2.2 hypothetical protein compare
BWI76_RS25060 -1.5 -3.0 lipoprotein NlpI compare
BWI76_RS19700 -1.5 -1.8 deoxyribonuclease IV compare
BWI76_RS15680 -1.5 -2.5 hypothetical protein compare
BWI76_RS16910 -1.4 -1.6 2-keto-4-pentenoate hydratase compare
BWI76_RS23830 -1.4 -4.4 hypothetical protein compare
BWI76_RS14320 -1.4 -1.4 hypothetical protein compare
BWI76_RS00390 -1.4 -3.4 two-component system sensor histidine kinase NtrB compare
BWI76_RS11155 -1.4 -1.7 penicillin-binding protein activator LpoB compare
BWI76_RS01070 -1.4 -5.0 thiol reductase thioredoxin compare
BWI76_RS24900 -1.4 -1.2 DeoR family transcriptional regulator compare
BWI76_RS17675 -1.4 -1.3 hypothetical protein compare
BWI76_RS02775 -1.4 -3.2 outer membrane protein assembly factor compare
BWI76_RS15840 -1.4 -2.9 prophage protein compare
BWI76_RS12895 -1.4 -2.4 hypothetical protein compare
BWI76_RS23490 -1.4 -4.0 fimbrial protein compare
BWI76_RS02855 -1.4 -2.0 cytochrome B562 compare
BWI76_RS12285 -1.4 -1.8 hypothetical protein compare
BWI76_RS08425 -1.4 -2.7 succinyl-CoA ligase subunit beta compare
BWI76_RS02530 -1.4 -0.9 tRNA dimethylallyltransferase compare
BWI76_RS18470 -1.3 -2.0 hypothetical protein compare
BWI76_RS26200 -1.3 -4.3 starch synthase compare
BWI76_RS21580 -1.3 -0.7 SsrA-binding protein compare
BWI76_RS20335 -1.3 -3.8 zinc transporter compare
BWI76_RS12335 -1.3 -4.5 hypothetical protein compare
BWI76_RS09625 -1.3 -0.8 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For mixed community Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella in Klebsiella michiganensis M5al

For mixed community Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella across organisms