Experiment set13IT039 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS27455 +1.8 4.6 DUF805 domain-containing protein compare
BWI76_RS11675 +1.5 2.7 arginine N-succinyltransferase compare
BWI76_RS14770 +1.4 1.4 PTS IIA 2 domain protein compare
BWI76_RS09515 +1.4 2.3 arginine ABC transporter substrate-binding protein compare
BWI76_RS10055 +1.2 2.7 AraC family transcriptional regulator compare
BWI76_RS23895 +1.2 1.9 Xaa-Pro aminopeptidase compare
BWI76_RS07730 +1.2 1.2 iron-enterobactin transporter membrane protein compare
BWI76_RS16360 +1.1 1.1 electron transport complex subunit RsxB compare
BWI76_RS21395 +1.1 3.1 DTW domain-containing protein compare
BWI76_RS13420 +1.1 1.9 ABC transporter permease compare
BWI76_RS13955 +1.0 1.3 hypothetical protein compare
BWI76_RS20375 +1.0 1.7 membrane protein compare
BWI76_RS16080 +1.0 3.0 LysR family transcriptional regulator compare
BWI76_RS27820 +1.0 0.9 ilvB operon leader peptide IvbL compare
BWI76_RS11125 +1.0 1.8 metal-dependent hydrolase compare
BWI76_RS21235 +1.0 0.7 hypothetical protein compare
BWI76_RS15235 +1.0 4.1 hypothetical protein compare
BWI76_RS15290 +1.0 1.0 transcriptional regulator compare
BWI76_RS25375 +1.0 1.4 hypothetical protein compare
BWI76_RS24945 +1.0 1.7 glutamine amidotransferase compare
BWI76_RS23020 +1.0 1.5 cobalamin biosynthesis protein CbiQ compare
BWI76_RS04985 +0.9 2.2 aspartate 1-decarboxylase compare
BWI76_RS06800 +0.9 1.9 DUF2496 domain-containing protein compare
BWI76_RS19865 +0.9 2.2 ecotin compare
BWI76_RS15960 +0.9 1.8 LysR family transcriptional regulator compare
BWI76_RS18385 +0.9 1.5 hypothetical protein compare
BWI76_RS20785 +0.9 1.1 ethanolamine utilization protein EutJ compare
BWI76_RS26185 +0.9 1.8 thiosulfate sulfurtransferase compare
BWI76_RS15035 +0.9 1.4 metal ABC transporter permease compare
BWI76_RS01620 +0.9 2.0 hypothetical protein compare
BWI76_RS14435 +0.9 1.8 glutamine ABC transporter ATP-binding protein compare
BWI76_RS19375 +0.9 1.6 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS14755 +0.9 1.6 SIS domain-containing protein compare
BWI76_RS01585 +0.9 2.6 transcriptional regulator compare
BWI76_RS14840 +0.8 2.1 hypothetical protein compare
BWI76_RS06340 +0.8 2.2 hypothetical protein compare
BWI76_RS15260 +0.8 1.4 hypothetical protein compare
BWI76_RS18605 +0.8 1.1 oxidoreductase molybdopterin-binding protein compare
BWI76_RS17400 +0.8 1.1 transporter compare
BWI76_RS11710 +0.8 2.3 nucleotide excision repair endonuclease compare
BWI76_RS19215 +0.8 1.2 proline-specific peptidase compare
BWI76_RS12665 +0.8 1.7 hypothetical protein compare
BWI76_RS02225 +0.8 1.4 phosphonate C-P lyase system protein PhnG compare
BWI76_RS25425 +0.8 0.6 arginine repressor compare
BWI76_RS20150 +0.8 1.2 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS11350 +0.8 1.4 DeoR family transcriptional regulator compare
BWI76_RS11690 +0.8 3.6 succinylglutamate desuccinylase compare
BWI76_RS05950 +0.8 1.4 polar amino acid ABC transporter inner membrane subunit compare
BWI76_RS02580 +0.8 1.4 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS16400 +0.8 2.2 pyridoxal kinase compare
BWI76_RS19690 +0.8 1.4 LysR family transcriptional regulator compare
BWI76_RS14775 +0.8 1.6 creatinine amidohydrolase compare
BWI76_RS26405 +0.8 1.2 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS21390 +0.8 2.4 thiol disulfide reductase thioredoxin compare
BWI76_RS09530 +0.8 0.9 hypothetical protein compare
BWI76_RS13070 +0.8 2.9 hypothetical protein compare
BWI76_RS09765 +0.8 1.9 metalloprotease compare
BWI76_RS13685 +0.7 1.8 IclR family transcriptional regulator compare
BWI76_RS21210 +0.7 4.1 hypothetical protein compare
BWI76_RS20635 +0.7 2.2 sulfate transporter CysZ compare
BWI76_RS24280 +0.7 2.2 biopolymer transporter ExbB compare
BWI76_RS27610 +0.7 2.6 hydroxyacid dehydrogenase compare
BWI76_RS17920 +0.7 1.8 23S rRNA (guanine(745)-N(1))-methyltransferase compare
BWI76_RS22300 +0.7 1.8 hydrogenase 3 maturation endopeptidase HyCI compare
BWI76_RS11460 +0.7 2.7 DUF441 family protein compare
BWI76_RS07595 +0.7 2.1 putative oxidoreductase compare
BWI76_RS16945 +0.7 1.5 4-hydroxyphenylpyruvate dioxygenase compare
BWI76_RS20945 +0.7 1.7 uracil phosphoribosyltransferase compare
BWI76_RS13170 +0.7 1.4 methyltransferase compare
BWI76_RS04145 +0.7 2.2 purine-nucleoside phosphorylase compare
BWI76_RS10295 +0.7 1.9 short chain dehydrogenase/reductase family oxidoreductase compare
BWI76_RS03140 +0.7 3.3 alcohol dehydrogenase compare
BWI76_RS22270 +0.7 2.3 nickel transporter compare
BWI76_RS25485 +0.7 1.3 septum formation protein Maf compare
BWI76_RS11780 +0.7 2.5 2-deoxyglucose-6-phosphatase compare
BWI76_RS02180 +0.7 1.1 hypothetical protein compare
BWI76_RS07985 +0.7 0.8 fluoride ion transporter CrcB compare
BWI76_RS20390 +0.7 1.2 erythronate-4-phosphate dehydrogenase compare
BWI76_RS09520 +0.7 1.2 arginine ABC transporter ATP-binding protein ArtP compare
BWI76_RS26505 +0.7 1.3 nickel ABC transporter permease subunit NikB compare
BWI76_RS27950 +0.7 2.4 transcriptional regulator compare
BWI76_RS13990 +0.7 3.3 allophanate hydrolase compare
BWI76_RS12965 +0.7 2.6 LysR family transcriptional regulator compare
BWI76_RS07255 +0.7 1.1 hypothetical protein compare
BWI76_RS15305 +0.7 1.7 O-acetylserine/cysteine exporter compare
BWI76_RS11335 +0.7 1.0 tautomerase compare
BWI76_RS00710 +0.7 1.1 6-N-hydroxylaminopurine resistance protein compare
BWI76_RS25000 +0.7 1.1 malonate decarboxylase acyl carrier protein compare
BWI76_RS17470 +0.7 2.8 MerR family transcriptional regulator compare
BWI76_RS07380 +0.7 2.3 hypothetical protein compare
BWI76_RS22185 +0.7 1.4 hypothetical protein compare
BWI76_RS27620 +0.7 1.7 hypothetical protein compare
BWI76_RS24350 +0.7 1.9 quinol monooxygenase compare
BWI76_RS27670 +0.7 2.1 LysR family transcriptional regulator compare
BWI76_RS12465 +0.7 1.1 phage shock protein D compare
BWI76_RS13425 +0.7 2.3 1-pyrroline dehydrogenase compare
BWI76_RS12580 +0.7 2.8 oxidoreductase compare
BWI76_RS05510 +0.7 2.0 NADH:ubiquinone reductase (Na(+)-transporting) subunit E compare
BWI76_RS20775 +0.6 2.3 ethanolamine utilization protein EutH compare
BWI76_RS03825 +0.6 3.8 4-hydroxyphenylacetate 3-monooxygenase compare
BWI76_RS11185 +0.6 2.1 ligand-gated channel protein compare
BWI76_RS24110 +0.6 1.8 YggU family protein compare
BWI76_RS13355 +0.6 2.5 AraC family transcriptional regulator compare
BWI76_RS14935 +0.6 0.8 NIPSNAP family containing protein compare
BWI76_RS08615 +0.6 3.0 galactokinase compare
BWI76_RS18745 +0.6 2.5 adenosylhomocysteinase compare
BWI76_RS01895 +0.6 1.5 cupin compare
BWI76_RS01630 +0.6 0.6 16S ribosomal RNA compare
BWI76_RS26980 +0.6 1.9 cold-shock protein compare
BWI76_RS20940 +0.6 1.9 uracil/xanthine transporter compare
BWI76_RS22310 +0.6 2.3 hydrogenase 3 small subunit compare
BWI76_RS06505 +0.6 2.6 hypothetical protein compare
BWI76_RS05335 +0.6 1.6 copper homeostasis/adhesion lipoprotein NlpE compare
BWI76_RS11055 +0.6 2.0 hydrolase compare
BWI76_RS06280 +0.6 1.9 hypothetical protein compare
BWI76_RS08770 +0.6 1.8 malonyl-ACP O-methyltransferase BioC compare
BWI76_RS15080 +0.6 5.4 hypothetical protein compare
BWI76_RS09445 +0.6 1.7 NADPH-dependent oxidoreductase compare
BWI76_RS15980 +0.6 1.6 lysine transporter LysE compare
BWI76_RS26630 +0.6 2.4 pimeloyl-[acyl-carrier protein] methyl ester esterase compare
BWI76_RS07640 +0.6 1.0 short chain dehydrogenase compare
BWI76_RS16095 +0.6 2.2 thiamine biosynthesis protein ApbE compare
BWI76_RS24035 +0.6 1.8 hypothetical protein compare
BWI76_RS11515 +0.6 1.4 peptide-methionine (R)-S-oxide reductase compare
BWI76_RS26480 +0.6 3.1 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase compare
BWI76_RS11435 +0.6 1.2 hypothetical protein compare
BWI76_RS12575 +0.6 1.8 FAD-dependent oxidoreductase compare
BWI76_RS13060 +0.6 2.0 glutathione S-transferase compare
BWI76_RS09065 +0.6 2.3 sugar phosphatase SupH compare
BWI76_RS20810 +0.6 2.0 ethanolamine utilization cobalamin adenosyltransferase compare
BWI76_RS11810 +0.6 1.4 outer membrane protein OmpW compare
BWI76_RS07970 +0.6 1.7 hypothetical protein compare
BWI76_RS11240 +0.6 2.2 spermidine/putrescine ABC transporter substrate-binding protein PotD compare
BWI76_RS16160 +0.6 1.5 LysR family transcriptional regulator compare
BWI76_RS09450 +0.6 1.3 30S ribosomal protein S6--L-glutamate ligase compare
BWI76_RS15415 +0.6 2.5 LacI family transcriptional regulator compare
BWI76_RS25160 +0.6 1.5 transcription elongation factor GreA compare
BWI76_RS02445 +0.6 1.3 fumarate reductase subunit C compare
BWI76_RS21940 +0.6 1.9 SDR family oxidoreductase compare
BWI76_RS22215 +0.6 2.5 PTS sorbitol transporter subunit IIC compare
BWI76_RS07735 +0.6 2.3 MFS transporter compare
BWI76_RS24215 +0.6 2.3 LysR family transcriptional regulator compare
BWI76_RS11200 +0.6 1.5 transpeptidase compare
BWI76_RS13405 +0.6 1.7 spermidine/putrescine ABC transporter substrate-binding protein compare
BWI76_RS23060 +0.6 2.7 cobalt-precorrin-4 C(11)-methyltransferase compare
BWI76_RS12480 +0.6 2.2 TIGR01620 family protein compare
BWI76_RS05895 +0.6 2.0 phosphonate ABC transporter, permease protein PhnE compare
BWI76_RS19495 +0.6 0.6 ABC transporter, quaternary amine uptake transporter (QAT) family, ATP-binding protein compare
BWI76_RS04545 +0.6 3.2 two-component response regulator for citrate compare
BWI76_RS14230 +0.6 3.3 flavin monoamine oxidase family protein compare
BWI76_RS07810 +0.6 2.2 sugar ABC transporter periplasmic sugar-binding protein compare
BWI76_RS10870 +0.6 2.3 nicotinamidase compare
BWI76_RS11750 +0.6 2.2 chitooligosaccharide deacetylase compare
BWI76_RS04965 +0.6 1.5 ABC transporter ATP-binding protein compare
BWI76_RS15900 +0.6 2.3 hypothetical protein compare
BWI76_RS08640 +0.6 1.2 multidrug efflux pump-associated protein, AcrZ family compare
BWI76_RS27045 +0.6 3.4 XylR family transcriptional regulator compare
BWI76_RS16195 +0.6 1.0 hypothetical protein compare
BWI76_RS12440 +0.6 2.4 MFS transporter compare
BWI76_RS25480 +0.6 2.8 ribonuclease E/G compare
BWI76_RS18855 +0.6 2.6 cysteine desulfurase NifS compare
BWI76_RS15800 +0.6 1.9 transcriptional regulator compare
BWI76_RS21040 +0.6 1.9 peptidase M4 compare
BWI76_RS22280 +0.6 1.2 formate dehydrogenase-H ferredoxin subunit compare
BWI76_RS09285 +0.6 1.6 hypothetical protein compare
BWI76_RS21200 +0.6 2.1 aldose epimerase compare
BWI76_RS27015 +0.5 2.0 hypothetical protein compare
BWI76_RS08220 +0.5 3.8 PTS N-acetyl glucosamine transporter subunit IIABC compare
BWI76_RS26065 +0.5 1.1 phosphoglycolate phosphatase compare
BWI76_RS15075 +0.5 3.6 non-ribosomal peptide synthase compare
BWI76_RS10385 +0.5 1.6 MmgE/PrpD family protein compare
BWI76_RS26380 +0.5 1.4 decarboxylase compare
BWI76_RS22235 +0.5 1.4 transcriptional regulator GutM compare
BWI76_RS01285 +0.5 1.9 amino acid ABC transporter substrate-binding protein compare
BWI76_RS16230 +0.5 1.2 dihydromonapterin reductase compare
BWI76_RS16270 +0.5 2.2 fumarate hydratase, class II compare
BWI76_RS27745 +0.5 1.4 PTS sugar transporter subunit IIB compare
BWI76_RS04575 +0.5 3.1 DNA polymerase II compare
BWI76_RS06935 +0.5 2.6 co-chaperone YbbN compare
BWI76_RS12085 +0.5 1.3 regulatory protein CII from bacteriophage origin compare
BWI76_RS10465 +0.5 1.4 hypothetical protein compare
BWI76_RS03605 +0.5 2.9 BMC domain-containing protein compare
BWI76_RS03005 +0.5 2.2 hypothetical protein compare
BWI76_RS18725 +0.5 1.8 hypothetical protein compare
BWI76_RS23120 +0.5 1.3 propanediol dehydratase medium subunit compare
BWI76_RS10730 +0.5 0.9 bifunctional glucose-1-phosphatase/inositol phosphatase compare
BWI76_RS01995 +0.5 0.8 AraC family transcriptional regulator compare
BWI76_RS19595 +0.5 2.6 hypothetical protein compare
BWI76_RS13220 +0.5 2.0 N-acetyltransferase compare
BWI76_RS20930 +0.5 1.3 arsenate reductase (glutaredoxin) compare
BWI76_RS08350 +0.5 2.7 carboxylase compare
BWI76_RS19320 +0.5 1.9 putative ABC transport system periplasmic binding protein compare
BWI76_RS07540 +0.5 2.2 dipeptide ABC transporter ATP-binding protein DppD compare
BWI76_RS02585 +0.5 1.9 hypothetical protein compare
BWI76_RS21540 +0.5 2.7 membrane protein compare
BWI76_RS18335 +0.5 2.7 DNA-binding response regulator compare
BWI76_RS06945 +0.5 2.2 multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1 compare
BWI76_RS20220 +0.5 2.9 sugar phosphatase compare
BWI76_RS13330 +0.5 0.6 tellurite resistance methyltransferase TehB compare
BWI76_RS09150 +0.5 1.4 DNA-binding transcriptional repressor DeoR compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in mixed community experiments

For mixed community Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella across organisms