Experiment set13IT011 for Ralstonia sp. UNC404CL21Col

Compare to:

Acanthamoeba sp., muxed culture-1

200 most important genes:

  gene name fitness t score description  
ABZR87_RS10610 -3.2 -2.2 inositol monophosphatase family protein compare
ABZR87_RS05350 -2.9 -6.7 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
ABZR87_RS16180 -2.8 -4.6 arginine/lysine/ornithine decarboxylase compare
ABZR87_RS02480 -2.8 -4.5 imidazole glycerol phosphate synthase subunit HisH compare
ABZR87_RS09635 -2.5 -2.9 ribosome small subunit-dependent GTPase A compare
ABZR87_RS04125 -2.5 -7.5 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
ABZR87_RS09615 -2.4 -2.1 50S ribosomal protein L19 compare
ABZR87_RS01285 -2.4 -2.5 preprotein translocase subunit YajC compare
ABZR87_RS04945 -2.4 -2.7 DUF4390 domain-containing protein compare
ABZR87_RS07510 -2.2 -4.6 LysR family transcriptional regulator compare
ABZR87_RS06495 -2.2 -2.5 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
ABZR87_RS05170 -2.0 -4.0 acetylglutamate kinase compare
ABZR87_RS21940 -2.0 -1.1 hypothetical protein compare
ABZR87_RS11790 -2.0 -2.9 cell division protein ZipA C-terminal FtsZ-binding domain-containing protein compare
ABZR87_RS04995 -2.0 -2.6 DNA topoisomerase III compare
ABZR87_RS15440 -1.9 -3.7 ribonuclease G compare
ABZR87_RS14330 -1.8 -1.3 hypothetical protein compare
ABZR87_RS07035 -1.8 -8.4 RNase adapter RapZ compare
ABZR87_RS00385 -1.7 -1.8 response regulator transcription factor compare
ABZR87_RS02160 -1.7 -5.1 indole-3-glycerol phosphate synthase TrpC compare
ABZR87_RS10120 -1.7 -1.8 YceD family protein compare
ABZR87_RS07635 -1.6 -3.0 crossover junction endodeoxyribonuclease RuvC compare
ABZR87_RS11170 -1.6 -0.9 FixH family protein compare
ABZR87_RS16860 -1.6 -2.8 response regulator compare
ABZR87_RS08695 -1.5 -7.6 capsular polysaccharide biosynthesis protein CapF compare
ABZR87_RS07730 -1.5 -2.2 lysophospholipid acyltransferase family protein compare
ABZR87_RS07005 -1.5 -2.4 lipoprotein insertase outer membrane protein LolB compare
ABZR87_RS10240 -1.5 -1.7 elongation factor P maturation arginine rhamnosyltransferase EarP compare
ABZR87_RS11015 -1.5 -4.4 amino-acid N-acetyltransferase compare
ABZR87_RS05015 -1.4 -4.8 penicillin-binding protein 2 compare
ABZR87_RS13300 -1.4 -6.4 class I poly(R)-hydroxyalkanoic acid synthase compare
ABZR87_RS04940 -1.4 -4.5 PAS domain-containing sensor histidine kinase compare
ABZR87_RS04975 -1.4 -2.0 peptide deformylase compare
ABZR87_RS05130 -1.4 -1.1 CsbD family protein compare
ABZR87_RS00970 -1.4 -1.6 molecular chaperone DnaJ compare
ABZR87_RS13290 -1.4 -3.6 3-ketoacyl-ACP reductase compare
ABZR87_RS02155 -1.3 -5.0 anthranilate phosphoribosyltransferase compare
ABZR87_RS08655 -1.3 -3.6 glucose-1-phosphate thymidylyltransferase RfbA compare
ABZR87_RS08700 -1.3 -3.9 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
ABZR87_RS22875 -1.3 -2.7 chorismate mutase compare
ABZR87_RS09895 -1.3 -1.0 DUF1841 family protein compare
ABZR87_RS05965 -1.2 -2.2 hemerythrin domain-containing protein compare
ABZR87_RS16270 -1.2 -1.6 cold-shock protein compare
ABZR87_RS13175 -1.2 -1.4 tRNA-Leu compare
ABZR87_RS01615 -1.2 -1.8 RNB domain-containing ribonuclease compare
ABZR87_RS12785 -1.2 -3.6 endopeptidase La compare
ABZR87_RS20075 -1.2 -1.8 DUF2892 domain-containing protein compare
ABZR87_RS12790 -1.1 -3.0 ATP-dependent Clp protease ATP-binding subunit ClpX compare
ABZR87_RS16250 -1.1 -2.5 iron-sulfur cluster carrier protein ApbC compare
ABZR87_RS08795 -1.1 -2.3 undecaprenyl-diphosphate phosphatase compare
ABZR87_RS02850 -1.1 -2.8 elongation factor Tu compare
ABZR87_RS07430 -1.1 -1.7 FmdB family zinc ribbon protein compare
ABZR87_RS21190 -1.1 -2.8 transporter substrate-binding domain-containing protein compare
ABZR87_RS18440 -1.1 -2.7 VOC family protein compare
ABZR87_RS23250 -1.1 -2.6 hypothetical protein compare
ABZR87_RS14505 -1.1 -3.7 phosphoribosylanthranilate isomerase compare
ABZR87_RS00005 -1.0 -2.5 hypothetical protein compare
ABZR87_RS06405 -1.0 -1.3 hypothetical protein compare
ABZR87_RS22385 -1.0 -4.2 cation-translocating P-type ATPase conserved
ABZR87_RS06745 -1.0 -3.6 S41 family peptidase compare
ABZR87_RS04295 -1.0 -3.4 HU family DNA-binding protein compare
ABZR87_RS04725 -1.0 -1.5 universal stress protein compare
ABZR87_RS15505 -1.0 -1.0 DNA polymerase III subunit alpha compare
ABZR87_RS16185 -1.0 -1.1 dCTP deaminase compare
ABZR87_RS09440 -1.0 -3.1 DUF2059 domain-containing protein compare
ABZR87_RS22015 -1.0 -2.1 hypothetical protein compare
ABZR87_RS22000 -1.0 -1.4 hypothetical protein compare
ABZR87_RS05145 -0.9 -1.0 copper chaperone PCu(A)C compare
ABZR87_RS06770 -0.9 -4.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
ABZR87_RS02325 -0.9 -3.2 cytochrome o ubiquinol oxidase subunit III compare
ABZR87_RS02340 -0.9 -7.0 Nramp family divalent metal transporter compare
ABZR87_RS07215 -0.9 -2.3 hotdog family protein compare
ABZR87_RS13400 -0.9 -0.9 hypothetical protein compare
ABZR87_RS17935 -0.9 -4.2 flagellar transcriptional regulator FlhC compare
ABZR87_RS01980 -0.9 -1.8 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
ABZR87_RS02320 -0.9 -2.1 cytochrome o ubiquinol oxidase subunit IV compare
ABZR87_RS11675 -0.9 -1.5 disulfide bond formation protein B compare
ABZR87_RS00625 -0.9 -1.6 hypothetical protein compare
ABZR87_RS07060 -0.9 -6.4 RNA polymerase factor sigma-54 compare
ABZR87_RS22220 -0.9 -4.5 flagellar biosynthetic protein FliR compare
ABZR87_RS00285 -0.9 -1.5 acetylornithine transaminase compare
ABZR87_RS22190 -0.9 -3.4 flagellar basal body-associated protein FliL compare
ABZR87_RS18730 -0.8 -1.9 redoxin domain-containing protein compare
ABZR87_RS18835 -0.8 -4.5 cytochrome d ubiquinol oxidase subunit II compare
ABZR87_RS10700 -0.8 -3.6 C40 family peptidase compare
ABZR87_RS06715 -0.8 -1.5 PTS sugar transporter subunit IIA compare
ABZR87_RS10400 -0.8 -2.3 hypothetical protein compare
ABZR87_RS21550 -0.8 -2.2 glyoxylate/hydroxypyruvate reductase A compare
ABZR87_RS07705 -0.8 -1.7 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
ABZR87_RS18000 -0.8 -1.0 protein phosphatase CheZ compare
ABZR87_RS14500 -0.8 -5.8 tryptophan synthase subunit beta compare
ABZR87_RS02590 -0.8 -3.9 3-dehydroquinate synthase compare
ABZR87_RS10565 -0.8 -2.5 cupin domain-containing protein compare
ABZR87_RS18140 -0.8 -2.0 type III secretion system export apparatus subunit SctR compare
ABZR87_RS05100 -0.8 -2.7 RNA polymerase-binding protein DksA compare
ABZR87_RS22260 -0.8 -1.7 flagellar basal body L-ring protein FlgH compare
ABZR87_RS07620 -0.8 -2.2 Holliday junction branch migration DNA helicase RuvB compare
ABZR87_RS20140 -0.8 -1.8 PAAR domain-containing protein compare
ABZR87_RS07880 -0.8 -1.4 hypothetical protein compare
ABZR87_RS14080 -0.8 -2.2 phosphate signaling complex protein PhoU compare
ABZR87_RS14965 -0.8 -2.0 DUF3619 family protein compare
ABZR87_RS22255 -0.8 -2.3 flagellar basal body P-ring protein FlgI compare
ABZR87_RS10910 -0.8 -1.5 RodZ family helix-turn-helix domain-containing protein compare
ABZR87_RS01485 -0.8 -2.5 2-dehydro-3-deoxygalactonokinase compare
ABZR87_RS19720 -0.8 -3.1 efflux RND transporter periplasmic adaptor subunit compare
ABZR87_RS17145 -0.8 -5.8 AMP nucleosidase compare
ABZR87_RS14970 -0.8 -1.7 DUF3106 domain-containing protein compare
ABZR87_RS16170 -0.7 -2.3 argininosuccinate lyase compare
ABZR87_RS04500 -0.7 -1.1 hypothetical protein compare
ABZR87_RS20730 -0.7 -0.8 hypothetical protein compare
ABZR87_RS10875 -0.7 -5.9 RNA polymerase sigma factor RpoS compare
ABZR87_RS19170 -0.7 -2.6 DMT family transporter compare
ABZR87_RS01430 -0.7 -5.7 LysR family transcriptional regulator compare
ABZR87_RS19320 -0.7 -0.8 hypothetical protein compare
ABZR87_RS13085 -0.7 -2.5 hypothetical protein compare
ABZR87_RS18025 -0.7 -3.6 flagellar biosynthesis protein FlhA compare
ABZR87_RS21795 -0.7 -3.0 NUDIX domain-containing protein compare
ABZR87_RS22520 -0.7 -1.5 ABATE domain-containing protein compare
ABZR87_RS14680 -0.7 -1.3 SDR family oxidoreductase compare
ABZR87_RS16885 -0.7 -1.5 hypothetical protein compare
ABZR87_RS07470 -0.7 -3.9 TetR/AcrR family transcriptional regulator compare
ABZR87_RS22890 -0.7 -3.3 response regulator transcription factor compare
ABZR87_RS14340 -0.7 -2.2 methyl-accepting chemotaxis protein compare
ABZR87_RS07805 -0.7 -2.8 AMP-binding protein compare
ABZR87_RS19715 -0.7 -5.5 CusA/CzcA family heavy metal efflux RND transporter compare
ABZR87_RS14540 -0.7 -2.7 3-isopropylmalate dehydratase large subunit compare
ABZR87_RS19535 -0.7 -4.7 type II and III secretion system protein family protein compare
ABZR87_RS13250 -0.7 -1.8 phosphoserine phosphatase SerB compare
ABZR87_RS22175 -0.7 -4.2 flagellin compare
ABZR87_RS02140 -0.7 -5.3 anthranilate synthase component I compare
ABZR87_RS17085 -0.7 -2.8 hypothetical protein compare
ABZR87_RS22105 -0.7 -2.8 dTDP-4-dehydrorhamnose 3,5-epimerase compare
ABZR87_RS20880 -0.7 -3.2 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
ABZR87_RS18465 -0.7 -2.3 YdeI/OmpD-associated family protein compare
ABZR87_RS21365 -0.7 -0.7 ligase-associated DNA damage response endonuclease PdeM compare
ABZR87_RS01085 -0.7 -2.4 rhombosortase compare
ABZR87_RS22340 -0.7 -0.9 hypothetical protein compare
ABZR87_RS11125 -0.7 -2.3 cell division protein ZapE compare
ABZR87_RS13145 -0.7 -1.8 hypothetical protein compare
ABZR87_RS19540 -0.7 -3.6 CpaE family protein compare
ABZR87_RS20395 -0.7 -1.9 acyl-CoA dehydrogenase family protein compare
ABZR87_RS05010 -0.7 -1.9 rod shape-determining protein RodA compare
ABZR87_RS19675 -0.7 -0.7 cold-shock protein compare
ABZR87_RS18335 -0.7 -1.3 GntR family transcriptional regulator compare
ABZR87_RS14615 -0.7 -3.7 DUF2863 family protein compare
ABZR87_RS22830 -0.7 -1.2 Crp/Fnr family transcriptional regulator compare
ABZR87_RS13205 -0.7 -1.1 hypothetical protein compare
ABZR87_RS01540 -0.7 -2.5 arabinose ABC transporter substrate-binding protein compare
ABZR87_RS08410 -0.7 -1.5 hypothetical protein compare
ABZR87_RS00875 -0.7 -1.6 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
ABZR87_RS02515 -0.7 -1.5 BolA family protein compare
ABZR87_RS05140 -0.7 -1.2 ATP-binding protein compare
ABZR87_RS19575 -0.6 -4.5 sigma-54-dependent Fis family transcriptional regulator compare
ABZR87_RS18840 -0.6 -3.6 cytochrome ubiquinol oxidase subunit I compare
ABZR87_RS20665 -0.6 -1.5 IclR family transcriptional regulator compare
ABZR87_RS10085 -0.6 -0.9 Rne/Rng family ribonuclease compare
ABZR87_RS09465 -0.6 -2.1 3-phosphoshikimate 1-carboxyvinyltransferase compare
ABZR87_RS19555 -0.6 -3.0 type II secretion system F family protein compare
ABZR87_RS17235 -0.6 -2.8 alkyl hydroperoxide reductase subunit C compare
ABZR87_RS16055 -0.6 -2.7 outer membrane lipoprotein chaperone LolA compare
ABZR87_RS01810 -0.6 -1.8 glutamate 5-kinase compare
ABZR87_RS19725 -0.6 -4.3 TolC family protein compare
ABZR87_RS00990 -0.6 -2.4 thioredoxin family protein compare
ABZR87_RS23180 -0.6 -0.9 ABC transporter ATP-binding protein compare
ABZR87_RS10190 -0.6 -3.2 translation elongation factor 4 compare
ABZR87_RS08440 -0.6 -2.2 hypothetical protein compare
ABZR87_RS19165 -0.6 -1.8 TerC family protein compare
ABZR87_RS18040 -0.6 -3.6 RNA polymerase sigma factor FliA compare
ABZR87_RS19510 -0.6 -3.2 collagen-like triple helix repeat-containing protein compare
ABZR87_RS05060 -0.6 -2.0 DUF484 family protein compare
ABZR87_RS03785 -0.6 -1.6 c-type cytochrome compare
ABZR87_RS23305 -0.6 -3.7 PepSY-associated TM helix domain-containing protein compare
ABZR87_RS13390 -0.6 -2.5 hypothetical protein compare
ABZR87_RS12735 -0.6 -3.4 winged helix DNA-binding protein compare
ABZR87_RS09445 -0.6 -3.2 3-phosphoserine/phosphohydroxythreonine transaminase compare
ABZR87_RS08640 -0.6 -2.1 symmetrical bis(5'-nucleosyl)-tetraphosphatase compare
ABZR87_RS14980 -0.6 -1.6 alpha/beta fold hydrolase compare
ABZR87_RS00390 -0.6 -3.9 hybrid sensor histidine kinase/response regulator compare
ABZR87_RS16820 -0.6 -3.1 TetR/AcrR family transcriptional regulator compare
ABZR87_RS01630 -0.6 -3.7 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
ABZR87_RS17710 -0.6 -2.1 DUF488 family protein compare
ABZR87_RS10350 -0.6 -1.3 3-isopropylmalate dehydratase small subunit compare
ABZR87_RS18620 -0.6 -1.3 adenosylmethionine decarboxylase compare
ABZR87_RS20930 -0.6 -1.7 DUF2520 domain-containing protein compare
ABZR87_RS14010 -0.6 -0.9 avidin/streptavidin family protein compare
ABZR87_RS04865 -0.6 -2.1 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABZR87_RS19560 -0.6 -2.4 lipoprotein compare
ABZR87_RS23415 -0.6 -0.8 metalloregulator ArsR/SmtB family transcription factor compare
ABZR87_RS16960 -0.6 -1.7 HAMP domain-containing sensor histidine kinase compare
ABZR87_RS22055 -0.6 -1.3 flagellar hook-length control protein FliK compare
ABZR87_RS21045 -0.6 -2.7 cyclopropane-fatty-acyl-phospholipid synthase family protein compare
ABZR87_RS18290 -0.6 -1.7 glycine zipper 2TM domain-containing protein compare
ABZR87_RS03455 -0.6 -3.5 type II secretion system ATPase GspE compare
ABZR87_RS19520 -0.6 -3.5 prepilin peptidase compare
ABZR87_RS12615 -0.6 -1.9 branched-chain amino acid ABC transporter permease compare
ABZR87_RS13130 -0.6 -2.8 ogr/Delta-like zinc finger family protein compare
ABZR87_RS13350 -0.6 -2.0 potassium transporter Kup compare
ABZR87_RS22430 -0.6 -2.9 PadR family transcriptional regulator compare
ABZR87_RS07675 -0.6 -3.0 N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU compare
ABZR87_RS22280 -0.6 -1.6 flagellar hook assembly protein FlgD compare


Specific Phenotypes

For 1 genes in this experiment

For micoeukaryotes Pelleted after growth overnight in LB+Kan50 in Ralstonia sp. UNC404CL21Col

For micoeukaryotes Pelleted after growth overnight in LB+Kan50 across organisms