Experiment set11IT078 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Xanthyletin 10 mM

200 most detrimental genes:

  gene name fitness t score description  
Psyr_2767 +1.2 3.3 Glycoside hydrolase, family 19 compare
Psyr_2196 +1.0 2.7 Urease accessory protein UreG compare
Psyr_2487 +0.9 3.1 Short-chain dehydrogenase/reductase SDR compare
Psyr_4224 +0.9 2.4 conserved hypothetical protein compare
Psyr_3692 +0.8 0.9 conserved hypothetical protein compare
Psyr_2340 +0.8 2.9 Peptidylprolyl isomerase, FKBP-type compare
Psyr_5036 +0.7 2.3 Response regulator receiver compare
Psyr_3459 +0.7 1.7 Helix-turn-helix, Fis-type compare
Psyr_3882 +0.7 2.1 conserved hypothetical protein compare
Psyr_3081 +0.7 2.1 Secretion protein HlyD compare
Psyr_3135 +0.7 2.0 transcriptional regulator, GntR family compare
Psyr_0153 +0.7 2.6 conserved hypothetical protein compare
Psyr_1955 +0.7 1.9 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix compare
Psyr_2223 +0.7 0.7 sarcosine oxidase, delta subunit compare
Psyr_3673 +0.7 1.0 Phosphoglycerate/bisphosphoglycerate mutase compare
Psyr_4336 +0.7 2.2 ribosomal large subunit pseudouridine synthase E compare
Psyr_2057 +0.6 2.0 acyl-CoA thioesterase II, putative compare
Psyr_4335 +0.6 1.5 transcriptional regulator, AsnC family compare
Psyr_4730 +0.6 1.8 FecR protein compare
Psyr_1616 +0.6 1.0 Rieske [2Fe-2S] region compare
Psyr_1852 +0.6 1.9 conserved hypothetical protein compare
Psyr_2538 +0.6 1.5 Binding-protein-dependent transport systems inner membrane component compare
Psyr_2557 +0.6 1.5 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase-like protein compare
Psyr_1755 +0.6 2.6 ABC transporter compare
Psyr_4143 +0.6 1.8 HAD-superfamily hydrolase, subfamily IIIA:Phosphatase YrbI compare
Psyr_2866 +0.6 2.8 Secretion protein HlyD compare
Psyr_0070 +0.6 1.4 hypothetical protein compare
Psyr_4161 +0.6 1.8 Rod shape-determining protein MreD compare
Psyr_0099 +0.6 1.4 Conserved hypothetical protein compare
Psyr_3591 +0.6 2.5 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal compare
Psyr_3791 +0.6 1.2 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal compare
Psyr_1719 +0.5 1.8 conserved hypothetical protein compare
Psyr_1811 +0.5 0.9 transcriptional regulator, GntR family compare
Psyr_1780 +0.5 1.6 transcriptional regulator, TetR family compare
Psyr_4487 +0.5 1.9 Carbohydrate kinase, PfkB compare
Psyr_0735 +0.5 1.6 Peptidase S24, S26A and S26B compare
Psyr_0385 +0.5 1.5 phosphoribosyl-ATP pyrophosphatase compare
Psyr_3938 +0.5 1.8 Amidase compare
Psyr_4673 +0.5 1.8 Coenzyme PQQ synthesis D compare
Psyr_1642 +0.5 1.5 Maf-like protein compare
Psyr_4285 +0.5 1.8 Ferredoxin:[2Fe-2S]-binding protein compare
Psyr_3558 +0.5 1.6 6,7-dimethyl-8-ribityllumazine synthase compare
Psyr_1294 +0.5 2.1 regulatory protein, LuxR:Response regulator receiver compare
Psyr_2310 +0.5 1.6 lipoprotein, putative compare
Psyr_4169 +0.5 1.5 4-carboxymuconolactone decarboxylase compare
Psyr_3006 +0.5 2.1 Protein of unknown function DUF419 compare
Psyr_1946 +0.5 1.4 diaminobutyrate aminotransferase apoenzyme compare
Psyr_0436 +0.5 1.6 Phosphopantetheine-binding protein compare
Psyr_0746 +0.5 2.1 IS66 Orf2 like protein compare
Psyr_2514 +0.5 2.1 ABC transporter compare
Psyr_2998 +0.5 2.1 conserved hypothetical protein compare
Psyr_1304 +0.5 1.5 CheW-like protein compare
Psyr_2890 +0.5 1.6 amino acid ABC transporter ATP-binding protein, PAAT family compare
Psyr_4092 +0.5 2.2 Glutathione S-transferase, N-terminal compare
Psyr_4086 +0.5 2.4 MscS Mechanosensitive ion channel compare
Psyr_3480 +0.5 1.9 Flagellar basal-body rod protein FlgC compare
Psyr_1317 +0.5 0.9 conserved hypothetical protein compare
Psyr_0176 +0.5 0.8 conserved hypothetical protein compare
Psyr_3058 +0.5 1.6 Amidase compare
Psyr_0674 +0.5 1.1 Protein of unknown function UPF0029 compare
Psyr_4682 +0.5 1.5 conserved hypothetical protein compare
Psyr_2501 +0.5 0.8 Hemerythrin compare
Psyr_0167 +0.5 1.6 hypothetical protein compare
Psyr_4077 +0.5 1.8 Methylated-DNA-[protein]-cysteine S-methyltransferase compare
Psyr_2277 +0.5 1.9 ammonium transporter compare
Psyr_1222 +0.5 1.1 CDS compare
Psyr_3446 +0.5 1.5 Surface presentation of antigens (SPOA) protein compare
Psyr_3545 +0.5 1.3 Short-chain dehydrogenase/reductase SDR compare
Psyr_3915 +0.4 1.7 Alpha/beta hydrolase fold protein compare
Psyr_3596 +0.4 1.6 Selenoprotein W-related protein compare
Psyr_2358 +0.4 2.3 acetylornithine aminotransferase apoenzyme compare
Psyr_2597 +0.4 2.0 diguanylate cyclase/phosphodiesterase compare
Psyr_2675 +0.4 1.6 transcriptional regulator, GntR family compare
Psyr_1633 +0.4 0.8 MotA/TolQ/ExbB proton channel compare
Psyr_2074 +0.4 1.9 ketopantoate reductase compare
Psyr_3117 +0.4 1.8 lipoprotein, putative compare
Psyr_2266 +0.4 1.0 Binding-protein-dependent transport systems inner membrane component compare
Psyr_1585 +0.4 2.8 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal compare
Psyr_2014 +0.4 1.3 conserved hypothetical protein compare
Psyr_3755 +0.4 1.0 conserved hypothetical protein compare
Psyr_2292 +0.4 1.1 L-glutaminase compare
Psyr_4440 +0.4 2.3 Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_3676 +0.4 1.3 adenosylcobyric acid synthase (glutamine-hydrolysing) compare
Psyr_1988 +0.4 1.6 2-keto-3-deoxy-phosphogalactonate aldolase compare
Psyr_1449 +0.4 1.5 hypothetical protein compare
Psyr_2434 +0.4 1.8 Carbohydrate kinase, PfkB compare
Psyr_3224 +0.4 2.0 Low molecular weight phosphotyrosine protein phosphatase compare
Psyr_2829 +0.4 0.9 conserved hypothetical protein compare
Psyr_1938 +0.4 1.9 Response regulator receiver compare
Psyr_1881 +0.4 1.4 conserved hypothetical protein compare
Psyr_4113 +0.4 3.1 LppC putative lipoprotein compare
Psyr_2124 +0.4 1.8 Benzoate transport compare
Psyr_1576 +0.4 1.7 Glutamine amidotransferase, class-II compare
Psyr_3394 +0.4 1.7 conserved hypothetical protein compare
Psyr_3230 +0.4 2.8 Glycosyl transferase, group 1 compare
Psyr_4417 +0.4 1.1 Ferredoxin--nitrite reductase compare
Psyr_2402 +0.4 1.6 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_3601 +0.4 0.9 conserved hypothetical protein compare
Psyr_2478 +0.4 2.1 surface antigen (D15):Surface antigen variable number compare
Psyr_2411 +0.4 1.1 Short-chain dehydrogenase/reductase SDR compare
Psyr_4842 +0.4 2.3 Phosphoenolpyruvate-protein phosphotransferase compare
Psyr_2533 +0.4 2.8 FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal compare
Psyr_0437 +0.4 1.2 acyl carrier protein, putative compare
Psyr_0445 +0.4 1.3 malonate decarboxylase, beta subunit compare
Psyr_1546 +0.4 1.3 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen compare
Psyr_2314 +0.4 1.7 pyruvate dehydrogenase (cytochrome) compare
Psyr_1871 +0.4 2.0 Transglutaminase-like protein compare
Psyr_3529 +0.4 1.6 Asp/Glu racemase compare
Psyr_0447 +0.4 1.3 malonate decarboxylase subunit, putative compare
Psyr_2927 +0.4 0.7 transcriptional regulator, TetR family compare
Psyr_0831 +0.4 0.8 Two-component response regulator CbrB compare
Psyr_2737 +0.4 1.2 hypothetical protein compare
Psyr_1888 +0.4 1.6 CDS compare
Psyr_0402 +0.4 3.4 Peptidoglycan glycosyltransferase compare
Psyr_1632 +0.4 2.1 ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2 compare
Psyr_3741 +0.4 1.7 Polyphosphate:AMP phosphotransferase compare
Psyr_2134 +0.4 0.8 protein of unknown function DUF903 compare
Psyr_2929 +0.4 1.2 transcriptional regulator, LysR family compare
Psyr_2051 +0.4 1.4 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_2529 +0.4 1.9 Amidohydrolase compare
Psyr_2202 +0.4 1.1 ABC transporter compare
Psyr_3262 +0.4 0.9 dnaK suppressor protein, putative compare
Psyr_1080 +0.4 2.2 Excinuclease ABC, C subunit, N-terminal compare
Psyr_2646 +0.4 2.6 Radical SAM compare
Psyr_2098 +0.4 1.3 uroporphyrinogen-III C-methyltransferase compare
Psyr_3452 +0.4 2.4 Sulfate transporter/antisigma-factor antagonist STAS compare
Psyr_1499 +0.4 1.4 Protein of unknown function DUF compare
Psyr_1381 +0.4 1.8 conserved hypothetical protein compare
Psyr_1728 +0.4 1.4 tRNA--hydroxylase compare
Psyr_2118 +0.4 1.2 protein of unknown function DUF883 compare
Psyr_2247 +0.4 1.5 ABC transporter compare
Psyr_4831 +0.4 1.3 ABC transporter compare
Psyr_1807 +0.4 1.1 Allantoicase compare
Psyr_4750 +0.4 1.1 cell division ATP-binding protein FtsE compare
Psyr_2554 +0.4 1.0 Fatty acid desaturase compare
Psyr_2443 +0.4 1.7 conserved domain protein compare
Psyr_3784 +0.4 1.8 conserved hypothetical protein compare
Psyr_0623 +0.4 1.0 Peptidase S24, S26A and S26B compare
Psyr_2870 +0.4 1.0 CDS compare
Psyr_2852 +0.4 1.3 conserved hypothetical protein compare
Psyr_2757 +0.4 0.9 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3050 +0.4 1.5 Aldo/keto reductase compare
Psyr_4874 +0.4 1.2 ABC transporter compare
Psyr_4630 +0.4 1.5 thiosulfate sulfurtransferase compare
Psyr_2344 +0.4 1.4 CDS compare
Psyr_3399 +0.4 1.5 Endoribonuclease L-PSP compare
Psyr_1335 +0.4 1.8 Aminotransferase, class V compare
Psyr_2244 +0.4 0.7 DNA topoisomerase III compare
Psyr_1002 +0.3 1.4 nucleoside ABC transporter ATP-binding protein compare
Psyr_2091 +0.3 1.6 esterase/lipase/thioesterase family protein compare
Psyr_0214 +0.3 1.3 conserved hypothetical protein compare
Psyr_5006 +0.3 2.4 HAD-superfamily hydrolase, subfamily IA, variant 3 compare
Psyr_4916 +0.3 1.5 conserved hypothetical protein compare
Psyr_0635 +0.3 0.8 MaoC-like dehydratase compare
Psyr_3597 +0.3 0.7 ABC transporter compare
Psyr_2923 +0.3 2.0 Carbohydrate kinase, PfkB compare
Psyr_2379 +0.3 2.0 amino acid/polyamine/organocation transporter, APC superfamily compare
Psyr_2524 +0.3 1.4 conserved hypothetical protein compare
Psyr_2192 +0.3 1.4 transcriptional regulator, TetR family compare
Psyr_1235 +0.3 1.4 serine O-acetyltransferase compare
Psyr_4498 +0.3 1.0 outer membrane transport energization protein ExbD compare
Psyr_0432 +0.3 1.2 conserved hypothetical protein compare
Psyr_3296 +0.3 0.9 MOSC:MOSC, N-terminal beta barrel compare
Psyr_3777 +0.3 1.0 conserved hypothetical protein compare
Psyr_4293 +0.3 1.9 Acyl-CoA thioesterase compare
Psyr_2147 +0.3 2.0 conserved hypothetical protein compare
Psyr_2497 +0.3 1.1 lipoprotein, putative compare
Psyr_3043 +0.3 1.3 Paraquat-inducible protein A compare
Psyr_3548 +0.3 1.2 Glutathione S-transferase, N-terminal compare
Psyr_2039 +0.3 1.0 Fimbrial protein compare
Psyr_2067 +0.3 0.9 ABC transporter compare
Psyr_4393 +0.3 1.8 type II secretion system protein E compare
Psyr_1893 +0.3 1.5 Isochorismatase hydrolase compare
Psyr_3195 +0.3 1.1 NolW-like protein compare
Psyr_3929 +0.3 1.6 conserved hypothetical protein compare
Psyr_3064 +0.3 1.5 luciferase compare
Psyr_3331 +0.3 1.5 Glycolate oxidase subunit GlcD compare
Psyr_1395 +0.3 1.8 virulence compare
Psyr_2605 +0.3 1.3 transposase, putative compare
Psyr_0361 +0.3 1.6 conserved hypothetical protein compare
Psyr_0142 +0.3 1.7 ABC transporter compare
Psyr_1939 +0.3 1.7 PAS compare
Psyr_3395 +0.3 1.1 FlhB domain protein compare
Psyr_3377 +0.3 1.0 transcriptional regulator, MarR family compare
Psyr_1933 +0.3 1.3 hypothetical protein compare
Psyr_3220 +0.3 1.9 Aminotransferase, class V compare
Psyr_0666 +0.3 1.5 transport system permease protein compare
Psyr_5071 +0.3 1.1 conserved hypothetical protein compare
Psyr_2741 +0.3 1.4 Beta-lactamase compare
Psyr_3095 +0.3 1.2 transport system permease protein compare
Psyr_3483 +0.3 1.9 Cyanase compare
Psyr_3567 +0.3 0.6 L-arginine ABC transporter ATP-binding protein / L-ornithine ABC transporter ATP-binding protein compare
Psyr_1507 +0.3 1.0 hypothetical protein compare
Psyr_3484 +0.3 1.3 regulatory protein, LysR:LysR, substrate-binding protein compare
Psyr_4877 +0.3 1.8 1-Cys peroxiredoxin compare
Psyr_0453 +0.3 1.4 16S rRNA m(3)U-1498 methyltransferase compare
Psyr_2974 +0.3 1.6 FAD-dependent pyridine nucleotide-disulfide oxidoreductase compare
Psyr_1154 +0.3 1.0 Copper/Zinc superoxide dismutase compare
Psyr_1993 +0.3 1.6 transcriptional regulator, AraC family compare
Psyr_4576 +0.3 1.3 OsmC-like protein compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Xanthyletin across organisms