Experiment set11IT064 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with 2',5'-Dihydroxy-4-Methoxychalcone 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_1544 -4.4 -3.0 SirA-like protein compare
Psyr_0951 -4.4 -4.2 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_4340 -4.3 -6.6 phosphomethylpyrimidine kinase, putative compare
Psyr_3008 -3.2 -8.7 Undecaprenyl-diphosphatase compare
Psyr_4740 -3.1 -7.2 thiazole-phosphate synthase compare
Psyr_1613 -3.1 -5.2 septum site-determining protein MinC compare
Psyr_2347 -2.9 -3.2 hypothetical protein compare
Psyr_4991 -2.9 -3.3 hypothetical protein compare
Psyr_3808 -2.8 -2.1 hypothetical protein compare
Psyr_0849 -2.7 -9.9 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_4341 -2.7 -6.8 thiamine-phosphate diphosphorylase compare
Psyr_0454 -2.6 -6.0 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_0917 -2.6 -12.8 ABC-2 compare
Psyr_4686 -2.5 -6.4 8-amino-7-oxononanoate synthase compare
Psyr_4684 -2.5 -3.6 biotin synthesis protein BioC compare
Psyr_4687 -2.4 -6.9 biotin synthase compare
Psyr_0475 -2.3 -3.1 Protein of unknown function YGGT compare
Psyr_1556 -2.3 -3.4 hypothetical protein compare
Psyr_0259 -2.3 -4.5 Osmolarity sensor protein envZ compare
Psyr_4581 -2.1 -3.5 anthranilate synthase, component II compare
Psyr_4203 -2.1 -2.8 SsrA-binding protein compare
Psyr_4683 -2.1 -4.4 dethiobiotin synthase compare
Psyr_0487 -2.0 -3.0 glutathione synthase compare
Psyr_4091 -2.0 -4.1 8-oxo-dGTPase compare
Psyr_1663 -1.9 -3.3 phosphoribosylanthranilate isomerase compare
Psyr_0918 -1.9 -9.8 ABC transporter compare
Psyr_0565 -1.9 -7.1 Protein of unknown function UPF0126 compare
Psyr_4362 -1.9 -2.9 Rare lipoprotein A compare
Psyr_0826 -1.8 -7.4 glucose-6-phosphate isomerase compare
Psyr_0574 -1.8 -5.4 protease FtsH subunit HflK compare
Psyr_2112 -1.8 -2.8 Protein with unknown function DUF469 compare
Psyr_1907 -1.8 -3.2 GTP cyclohydrolase I compare
Psyr_0255 -1.7 -2.2 glutamate-cysteine ligase compare
Psyr_0383 -1.7 -1.6 Twin-arginine translocation protein TatB compare
Psyr_1419 -1.7 -3.4 preQ(0) biosynthesis protein QueC compare
Psyr_5132 -1.6 -3.7 Glucose-inhibited division protein A subfamily compare
Psyr_3287 -1.6 -2.3 DNA topoisomerase I compare
Psyr_1408 -1.6 -3.0 Holliday junction endonuclease RuvC compare
Psyr_2807 -1.6 -2.0 NinB compare
Psyr_2071 -1.5 -1.3 outer membrane lipoprotein OprI compare
Psyr_RNA61 -1.4 -3.3 tRNA-Gly compare
Psyr_3554 -1.4 -2.2 Carbon storage regulator compare
Psyr_1751 -1.4 -4.2 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_1418 -1.4 -3.1 Radical SAM compare
Psyr_0464 -1.3 -2.8 hypothetical protein compare
Psyr_1588 -1.3 -3.4 Putative exonuclease, RdgC compare
Psyr_4884 -1.3 -4.9 Rhodanese-like protein compare
Psyr_1404 -1.3 -7.7 Ferritin and Dps compare
Psyr_1747 -1.3 -3.8 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_3179 -1.3 -2.1 DNA translocase FtsK compare
Psyr_1930 -1.3 -3.3 hypothetical protein compare
Psyr_1931 -1.3 -4.3 hypothetical protein compare
Psyr_4580 -1.3 -2.2 anthranilate phosphoribosyltransferase compare
Psyr_4089 -1.2 -4.9 PAS compare
Psyr_1688 -1.2 -2.8 Protein of unknown function DUF1315 compare
Psyr_5133 -1.2 -3.4 tRNA modification GTPase trmE compare
Psyr_0282 -1.2 -4.8 Binding-protein-dependent transport systems inner membrane component compare
Psyr_0838 -1.2 -2.1 Rieske [2Fe-2S] region compare
Psyr_3728 -1.2 -3.7 hypothetical protein compare
Psyr_2346 -1.1 -3.8 conserved hypothetical protein compare
Psyr_5135 -1.1 -2.0 Protein of unknown function DUF37 compare
Psyr_3954 -1.1 -3.8 GTP-binding protein LepA compare
Psyr_2769 -1.1 -4.2 conserved hypothetical protein compare
Psyr_2980 -1.1 -2.7 UDP-glucose pyrophosphorylase compare
Psyr_1748 -1.1 -3.7 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_1935 -1.1 -4.1 Protein of unknown function DUF796 compare
Psyr_1373 -1.1 -2.2 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_2332 -1.1 -3.1 conserved hypothetical protein compare
Psyr_0034 -1.1 -1.0 tryptophan synthase, beta chain compare
Psyr_4309 -1.1 -4.6 hypothetical protein compare
Psyr_2520 -1.1 -1.8 SOS-response transcriptional repressor, LexA compare
Psyr_0215 -1.0 -6.4 Exodeoxyribonuclease III xth compare
Psyr_1555 -1.0 -2.6 Cobyrinic acid a,c-diamide synthase compare
Psyr_1843 -1.0 -2.3 Protein of unknown function DUF1311 compare
Psyr_1885 -1.0 -1.6 hypothetical protein compare
Psyr_3581 -1.0 -4.2 ribosomal large subunit pseudouridine synthase B compare
Psyr_4519 -1.0 -5.6 General substrate transporter:Major facilitator superfamily compare
Psyr_1929 -1.0 -4.1 hypothetical protein compare
Psyr_4093 -1.0 -3.8 glutamate N-acetyltransferase compare
Psyr_2428 -1.0 -3.5 GCN5-related N-acetyltransferase compare
Psyr_2069 -1.0 -2.0 conserved hypothetical protein compare
Psyr_1460 -1.0 -3.8 hypothetical protein compare
Psyr_4051 -1.0 -2.2 transcriptional regulator, ArsR family compare
Psyr_2642 -1.0 -3.0 hypothetical protein compare
Psyr_1378 -1.0 -1.9 RecA protein compare
Psyr_3084 -1.0 -2.8 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_0550 -0.9 -3.2 Protein of unknown function UPF0227 compare
Psyr_2471 -0.9 -1.9 hydroxymethylglutaryl-CoA lyase compare
Psyr_3807 -0.9 -3.8 hypothetical protein compare
Psyr_3665 -0.9 -2.8 conserved hypothetical protein compare
Psyr_4115 -0.9 -1.6 phosphoheptose isomerase compare
Psyr_3090 -0.9 -2.5 hypothetical protein compare
Psyr_0927 -0.9 -2.3 hypothetical protein compare
Psyr_1372 -0.9 -3.4 Protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
Psyr_3005 -0.9 -1.3 3-oxoadipate enol-lactonase compare
Psyr_0281 -0.9 -2.1 ABC transporter compare
Psyr_1802 -0.9 -1.4 transcriptional regulator, AsnC family compare
Psyr_0831 -0.9 -1.6 Two-component response regulator CbrB compare
Psyr_3806 -0.9 -3.2 hypothetical protein compare
Psyr_0575 -0.9 -2.4 protease FtsH subunit HflC compare
Psyr_1350 -0.9 -1.6 site-2 protease, Metallo peptidase, MEROPS family M50B compare
Psyr_2838 -0.9 -1.3 conserved hypothetical protein compare
Psyr_1410 -0.9 -2.6 Holliday junction DNA helicase RuvB compare
Psyr_3305 -0.9 -3.7 Glycosyl transferase, group 1 compare
Psyr_4627 -0.9 -1.4 dimethyladenosine transferase compare
Psyr_4822 -0.9 -1.9 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_4566 -0.9 -5.5 Peptidase M23B compare
Psyr_0535 -0.9 -1.6 toluene tolerance protein, putative compare
Psyr_1505 -0.9 -2.3 Protein of unknown function DUF156 compare
Psyr_2854 -0.9 -2.8 conserved hypothetical protein compare
Psyr_4464 -0.8 -1.2 lipoprotein, putative compare
Psyr_5129 -0.8 -2.9 chromosome segregation DNA-binding protein compare
Psyr_2848 -0.8 -2.2 hypothetical protein compare
Psyr_3677 -0.8 -2.4 Aminotransferase, class I and II compare
Psyr_1050 -0.8 -2.8 conserved hypothetical protein compare
Psyr_0817 -0.8 -3.4 N-acetylmuramoyl-L-alanine amidase, family 2 compare
Psyr_0941 -0.8 -3.9 Conserved hypothetical protein 92 compare
Psyr_2990 -0.8 -2.5 conserved hypothetical protein compare
Psyr_2899 -0.8 -2.8 conserved hypothetical protein compare
Psyr_2823 -0.8 -1.0 hypothetical protein compare
Psyr_1667 -0.8 -3.1 Colicin V production protein compare
Psyr_3127 -0.8 -2.5 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_0377 -0.8 -4.2 Periplasmic glucan biosynthesis protein, MdoG compare
Psyr_1975 -0.8 -2.4 Integrase, catalytic region compare
Psyr_1121 -0.8 -1.6 6-phosphogluconolactonase compare
Psyr_3958 -0.8 -5.2 RNA polymerase, sigma-24 subunit, RpoE compare
Psyr_2973 -0.8 -1.5 Glyoxalase I compare
Psyr_3020 -0.8 -1.6 precorrin-4 C11-methyltransferase compare
Psyr_2285 -0.8 -1.4 Twin-arginine translocation pathway signal compare
Psyr_0916 -0.8 -5.2 GDP-mannose 4,6-dehydratase compare
Psyr_2137 -0.8 -1.1 molybdopterin molybdochelatase compare
Psyr_3107 -0.8 -2.2 conserved hypothetical protein compare
Psyr_0033 -0.8 -0.7 tryptophan synthase, alpha chain compare
Psyr_2770 -0.8 -3.6 tail fiber domain protein compare
Psyr_4920 -0.7 -1.6 conserved hypothetical bacteriophage protein compare
Psyr_2842 -0.7 -3.9 hypothetical protein compare
Psyr_3640 -0.7 -1.3 conserved hypothetical protein compare
Psyr_1094 -0.7 -1.5 cold-shock DNA-binding protein family compare
Psyr_3601 -0.7 -1.6 conserved hypothetical protein compare
Psyr_4112 -0.7 -4.6 Protein of unknown function UPF0011 compare
Psyr_4622 -0.7 -2.6 Nucleotidyl transferase compare
Psyr_3208 -0.7 -1.6 NADH dehydrogenase subunit M compare
Psyr_3368 -0.7 -2.9 Protein of unknown function DUF451 compare
Psyr_2039 -0.7 -1.7 Fimbrial protein compare
Psyr_4194 -0.7 -2.2 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_0202 -0.7 -4.2 transcriptional regulator, LysR family compare
Psyr_1458 -0.7 -2.2 hypothetical protein compare
Psyr_0137 -0.7 -1.5 outer membrane transport energization protein ExbD compare
Psyr_0493 -0.7 -2.1 CheW-like protein compare
Psyr_0529 -0.7 -2.9 Glycosyl transferase, group 1 compare
Psyr_2143 -0.7 -1.5 delta1-piperideine 2-carboxylate reductase compare
Psyr_4609 -0.7 -5.1 anthranilate synthase, component I compare
Psyr_4490 -0.7 -1.6 transcriptional regulator, DeoR family compare
Psyr_0919 -0.7 -4.8 Chromosome segregation ATPase-like protein compare
Psyr_4879 -0.7 -2.0 hypothetical protein compare
Psyr_0014 -0.7 -2.1 lipid A biosynthesis acyltransferase compare
Psyr_3644 -0.7 -1.8 prephenate dehydrogenase compare
Psyr_1924 -0.7 -2.3 hypothetical protein compare
Psyr_3013 -0.7 -1.0 magnesium chelatase subunit ChlD compare
Psyr_1686 -0.7 -2.4 Metallophosphoesterase compare
Psyr_3585 -0.7 -2.3 Sua5/YciO/YrdC/YwlC compare
Psyr_1389 -0.7 -2.6 Protein of unknown function DUF1456 compare
Psyr_1749 -0.7 -3.7 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 compare
Psyr_1097 -0.7 -1.0 glycine cleavage system H protein compare
Psyr_2855 -0.7 -1.7 methionine synthase (B12-independent) compare
Psyr_3720 -0.7 -3.4 Filamentation induced by cAMP protein Fic compare
Psyr_3597 -0.7 -1.0 ABC transporter compare
Psyr_2552 -0.7 -1.9 cyclase/dehydrase compare
Psyr_2787 -0.7 -1.6 hypothetical protein compare
Psyr_0920 -0.7 -5.7 Glycosyl transferase, group 1 compare
Psyr_4460 -0.7 -1.0 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_0378 -0.7 -4.1 Glycosyl transferase, family 2 compare
Psyr_4786 -0.7 -1.1 hypothetical protein compare
Psyr_2345 -0.7 -3.0 ea59 protein compare
Psyr_1190 -0.7 -2.8 type III transcriptional regulator HrpR compare
Psyr_4978 -0.7 -2.4 hypothetical protein compare
Psyr_1324 -0.7 -2.1 conserved hypothetical protein compare
Psyr_2664 -0.7 -3.1 hypothetical protein compare
Psyr_1227 -0.7 -1.8 Queuosine biosynthesis protein compare
Psyr_3193 -0.7 -1.4 Transcription factor jumonji, jmjC compare
Psyr_3039 -0.7 -1.3 protein of unknown function DUF883 compare
Psyr_4055 -0.7 -1.7 conserved domain protein compare
Psyr_0579 -0.6 -4.6 RNAse R compare
Psyr_4424 -0.6 -3.5 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix compare
Psyr_0276 -0.6 -1.8 zinc uptake regulation protein, putative compare
Psyr_2462 -0.6 -2.1 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_1594 -0.6 -1.9 FKBP-type peptidyl-prolyl isomerase, N-terminal:Peptidylprolyl isomerase, FKBP-type compare
Psyr_3637 -0.6 -5.0 Glycosyl transferase, family 4 compare
Psyr_2601 -0.6 -3.8 regulatory protein, LuxR compare
Psyr_3246 -0.6 -2.0 Ku compare
Psyr_0490 -0.6 -2.6 CheW-like protein compare
Psyr_4361 -0.6 -2.1 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 compare
Psyr_4804 -0.6 -2.0 conserved hypothetical protein compare
Psyr_1779 -0.6 -1.8 hypothetical protein compare
Psyr_4830 -0.6 -1.6 Binding-protein-dependent transport systems inner membrane component compare
Psyr_2694 -0.6 -1.8 conserved hypothetical protein compare
Psyr_2060 -0.6 -2.1 Sec-independent protein translocase TatD compare
Psyr_0524 -0.6 -1.6 Lipopolysaccharide kinase compare
Psyr_0350 -0.6 -1.5 ABC transporter compare
Psyr_2629 -0.6 -3.6 von Willebrand factor, type A compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress 2',5'-Dihydroxy-4-Methoxychalcone across organisms