Experiment set11H26 for Pseudomonas stutzeri RCH2

Compare to:

LB with Phosphomycin disodium salt 0.012 mg/ml

200 most important genes:

  gene name fitness t score description  
Psest_2333 -5.1 -1.4 Protein of unknown function (DUF3359). compare
Psest_3648 -4.6 -9.4 anthranilate phosphoribosyltransferase compare
Psest_3647 -4.3 -8.3 Indole-3-glycerol phosphate synthase compare
Psest_1492 -4.3 -4.2 DNA-binding ferritin-like protein (oxidative damage protectant) compare
Psest_3301 -4.1 -3.3 Predicted transcriptional regulator, BolA superfamily compare
Psest_2584 -4.1 -6.6 Phosphoribosylanthranilate isomerase compare
Psest_0063 -3.8 -13.6 tryptophan synthase, beta subunit compare
Psest_0062 -3.6 -13.7 tryptophan synthase, alpha subunit compare
Psest_1496 -3.6 -1.6 Holliday junction DNA helicase, RuvA subunit compare
Psest_1824 -3.4 -4.0 Sugar transferases involved in lipopolysaccharide synthesis compare
Psest_3650 -3.2 -13.4 anthranilate synthase component I, non-proteobacterial lineages compare
Psest_0725 -2.9 -1.9 Negative regulator of beta-lactamase expression compare
Psest_0013 -2.8 -7.3 Lauroyl/myristoyl acyltransferase compare
Psest_3649 -2.7 -9.8 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase compare
Psest_3351 -2.7 -3.2 peptide chain release factor 3 compare
Psest_4219 -2.6 -1.8 DNA polymerase I compare
Psest_1920 -2.6 -1.2 Uncharacterized protein conserved in bacteria compare
Psest_0718 -2.5 -5.0 nicotinate-nucleotide pyrophosphorylase compare
Psest_2756 -2.5 -1.6 hypothetical protein compare
Psest_1870 -2.4 -1.5 Transcriptional regulators compare
Psest_0186 -2.2 -7.3 Protein-disulfide isomerase compare
Psest_4010 -2.2 -1.1 peroxiredoxin, OsmC subfamily compare
Psest_1724 -2.1 -3.2 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) compare
Psest_1532 -2.1 -4.6 DNA recombination-dependent growth factor C compare
Psest_3988 -2.1 -7.7 phosphoenolpyruvate carboxykinase (ATP) compare
Psest_3546 -2.1 -1.5 Phosphatidylglycerophosphatase A and related proteins compare
Psest_0259 -2.0 -1.4 cell division ATP-binding protein FtsE compare
Psest_2945 -2.0 -1.5 septum site-determining protein MinC compare
Psest_0113 -2.0 -3.6 Uncharacterized protein conserved in bacteria compare
Psest_1516 -2.0 -3.2 Uncharacterized lipoprotein compare
Psest_1505 -1.9 -2.6 Organic radical activating enzymes compare
Psest_3322 -1.9 -13.9 TIGR02099 family protein compare
Psest_0547 -1.9 -3.4 Urease accessory protein UreF compare
Psest_2718 -1.9 -1.6 hypothetical protein compare
Psest_2997 -1.9 -10.1 Long-chain fatty acid transport protein compare
Psest_3803 -1.9 -1.4 DNA repair protein radc compare
Psest_0515 -1.8 -4.3 rare lipoprotein A compare
Psest_2651 -1.8 -3.7 DNA topoisomerase I, bacterial compare
Psest_2454 -1.7 -2.6 Rhodanese-related sulfurtransferase compare
Psest_2872 -1.7 -1.1 protein RecA compare
Psest_1012 -1.7 -4.7 Signal transduction histidine kinase compare
Psest_3031 -1.7 -1.0 hypothetical protein compare
Psest_1480 -1.7 -2.6 arsenate reductase (glutaredoxin) compare
Psest_2726 -1.7 -1.9 Rhodanese-related sulfurtransferase compare
Psest_3862 -1.7 -11.2 phosphoenolpyruvate-protein phosphotransferase compare
Psest_3767 -1.7 -3.9 tyrosine recombinase XerC compare
Psest_2646 -1.7 -2.1 SOS regulatory protein LexA compare
Psest_3377 -1.6 -1.0 FKBP-type peptidyl-prolyl cis-trans isomerases 2 compare
Psest_2766 -1.6 -1.1 hypothetical protein compare
Psest_3816 -1.6 -1.3 DNA-directed RNA polymerase, omega subunit compare
Psest_2025 -1.6 -1.1 cold shock domain protein CspD compare
Psest_1871 -1.5 -7.2 Predicted esterase of the alpha-beta hydrolase superfamily compare
Psest_0482 -1.5 -4.9 yqiA-like hydrolase, affects the cell envelope (from data) compare
Psest_4405 -1.5 -2.0 hypothetical protein compare
Psest_3399 -1.4 -0.8 Uncharacterized protein conserved in bacteria compare
Psest_3810 -1.4 -1.0 orotate phosphoribosyltransferase compare
Psest_2775 -1.4 -2.7 Glycerol-3-phosphate dehydrogenase compare
Psest_2643 -1.4 -1.0 Beta-glucosidase-related glycosidases compare
Psest_0520 -1.4 -0.8 hypothetical protein compare
Psest_0313 -1.4 -4.5 5,10-methylenetetrahydrofolate reductase, prokaryotic form compare
Psest_1823 -1.4 -6.7 Nucleoside-diphosphate-sugar epimerases compare
Psest_2630 -1.4 -2.7 hypothetical protein compare
Psest_3039 -1.3 -1.4 periplasmic nitrate reductase, NapE protein compare
Psest_1656 -1.3 -1.8 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit compare
Psest_3910 -1.3 -1.3 Uncharacterized protein conserved in bacteria compare
Psest_0844 -1.3 -2.8 High-affinity Fe2+/Pb2+ permease compare
Psest_0182 -1.3 -4.4 glycine cleavage system H protein compare
Psest_2946 -1.3 -1.7 septum site-determining protein MinD compare
Psest_2791 -1.3 -2.4 hypothetical protein compare
Psest_1167 -1.3 -1.0 hypothetical protein compare
Psest_2864 -1.3 -2.7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Psest_2285 -1.3 -2.8 ATP-dependent protease La compare
Psest_4307 -1.3 -1.8 ABC-type Zn2+ transport system, periplasmic component/surface adhesin compare
Psest_1814 -1.2 -7.9 pseudaminic acid biosynthesis N-acetyl transferase compare
Psest_2566 -1.2 -1.0 Uncharacterized protein conserved in bacteria compare
Psest_3419 -1.2 -5.0 Predicted transcriptional regulators compare
Psest_0066 -1.2 -1.4 Protein of unknown function (DUF3060). compare
Psest_0673 -1.2 -3.6 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase compare
Psest_3505 -1.2 -5.2 Superfamily II DNA and RNA helicases compare
Psest_0846 -1.2 -3.1 Uncharacterized protein probably involved in high-affinity Fe2+ transport compare
Psest_3189 -1.2 -2.3 hypothetical protein compare
Psest_4370 -1.2 -2.5 Multisubunit Na+/H+ antiporter, MnhC subunit compare
Psest_4076 -1.2 -7.1 hypothetical protein compare
Psest_2101 -1.2 -1.5 hypothetical protein compare
Psest_1428 -1.2 -2.9 Threonine dehydrogenase and related Zn-dependent dehydrogenases compare
Psest_1692 -1.2 -4.5 conserved hypothetical protein, YceG family compare
Psest_3247 -1.2 -1.3 Uncharacterized membrane protein compare
Psest_4310 -1.2 -1.4 ABC-type Mn2+/Zn2+ transport systems, permease components compare
Psest_3129 -1.1 -1.0 tyrosine recombinase XerD compare
Psest_0542 -1.1 -6.2 AMP nucleosidase compare
Psest_0516 -1.1 -5.4 D-alanyl-D-alanine carboxypeptidase compare
Psest_0743 -1.1 -4.4 adenosine deaminase compare
Psest_0831 -1.1 -0.9 hypothetical protein compare
Psest_1535 -1.1 -2.6 FKBP-type peptidyl-prolyl cis-trans isomerases 1 compare
Psest_3212 -1.1 -2.6 FKBP-type peptidyl-prolyl cis-trans isomerases 2 compare
Psest_3645 -1.1 -5.8 Predicted redox protein, regulator of disulfide bond formation compare
Psest_3954 -1.1 -1.9 Small protein A (tmRNA-binding) compare
Psest_2764 -1.1 -1.0 hypothetical protein compare
Psest_4077 -1.1 -5.9 amino acid carrier protein compare
Psest_0842 -1.1 -1.5 anaerobic ribonucleoside-triphosphate reductase activating protein compare
Psest_3788 -1.1 -2.1 xanthine phosphoribosyltransferase compare
Psest_4151 -1.1 -1.9 Flagellar hook capping protein compare
Psest_0030 -1.1 -3.0 Putative NADH-flavin reductase compare
Psest_2757 -1.1 -0.9 hypothetical protein compare
Psest_1999 -1.1 -0.9 pseudouridine synthase compare
Psest_2730 -1.1 -2.3 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_0843 -1.0 -5.7 hypothetical protein compare
Psest_0845 -1.0 -0.6 hypothetical protein compare
Psest_1491 -1.0 -2.1 Cold shock proteins compare
Psest_3565 -1.0 -1.2 hypothetical protein compare
Psest_0744 -1.0 -0.8 Uncharacterized conserved protein compare
Psest_3070 -1.0 -1.6 3-oxoadipyl-CoA thiolase compare
Psest_0853 -1.0 -2.6 6-phosphogluconolactonase compare
Psest_3860 -1.0 -1.9 Predicted permeases compare
Psest_3395 -1.0 -0.8 hypothetical protein compare
Psest_0872 -1.0 -0.7 Helix-turn-helix. compare
Psest_0346 -1.0 -1.8 small component of pyruvate/D-alanine transporter (TIGR03647) (from data) compare
Psest_2637 -1.0 -1.3 putative methyltransferase, YaeB/AF_0241 family compare
Psest_4134 -1.0 -1.7 Uncharacterized protein conserved in bacteria compare
Psest_2967 -1.0 -2.9 flagellar basal-body rod protein FlgC compare
Psest_1163 -1.0 -2.9 diguanylate cyclase (GGDEF) domain compare
Psest_3731 -1.0 -6.2 exopolyphosphatase compare
Psest_0958 -1.0 -3.5 Oligoketide cyclase/lipid transport protein compare
Psest_1111 -0.9 -2.5 Flp pilus assembly protein TadD, contains TPR repeats compare
Psest_0161 -0.9 -1.4 Membrane-bound metallopeptidase compare
Psest_3795 -0.9 -4.5 Glycine/D-amino acid oxidases (deaminating) compare
Psest_3367 -0.9 -0.9 translation initation factor SUI1, putative, prokaryotic compare
Psest_4315 -0.9 -1.5 ABC-type metal ion transport system, permease component compare
Psest_0260 -0.9 -1.0 Cell division protein compare
Psest_1919 -0.9 -2.4 Uncharacterized membrane protein (homolog of Drosophila rhomboid) compare
Psest_2308 -0.9 -0.8 Predicted Fe-S protein compare
Psest_1180 -0.9 -2.8 hydroxypyruvate isomerase compare
Psest_0805 -0.9 -2.0 hypothetical protein compare
Psest_0708 -0.9 -1.1 outer membrane assembly lipoprotein YfiO compare
Psest_2729 -0.9 -4.4 Signal transduction histidine kinase compare
Psest_1782 -0.9 -1.4 Predicted transcriptional regulators compare
Psest_0722 -0.9 -4.2 Predicted ATPase compare
Psest_0369 -0.9 -2.8 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily compare
Psest_4191 -0.9 -1.7 Transcriptional regulator compare
Psest_3317 -0.9 -2.2 Phosphotransferase System HPr (HPr) Family compare
Psest_1510 -0.9 -1.8 Putative Zn-dependent protease, contains TPR repeats compare
Psest_2977 -0.9 -3.4 hypothetical protein compare
Psest_2667 -0.9 -2.5 Uncharacterized protein involved in propionate catabolism compare
Psest_3226 -0.9 -0.7 Predicted membrane protein compare
Psest_2556 -0.9 -5.3 AraC-type DNA-binding domain-containing proteins compare
Psest_0507 -0.9 -3.1 Uncharacterized membrane-associated protein compare
Psest_3745 -0.9 -2.1 Uncharacterized enzyme of heme biosynthesis compare
Psest_3236 -0.9 -2.2 hypothetical protein compare
Psest_0279 -0.9 -3.2 methionine biosynthesis protein MetW compare
Psest_4158 -0.9 -2.0 Flagellar motor protein compare
Psest_4363 -0.9 -4.1 ATPases involved in chromosome partitioning compare
Psest_3895 -0.9 -1.8 hypothetical protein compare
Psest_2520 -0.9 -1.1 Predicted SAM-dependent methyltransferase compare
Psest_4005 -0.9 -3.9 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB compare
Psest_3270 -0.9 -1.3 probable S-adenosylmethionine-dependent methyltransferase, YraL family compare
Psest_0587 -0.9 -2.0 Domain of Unknown Function (DUF326). compare
Psest_3299 -0.9 -4.2 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
Psest_0257 -0.9 -1.6 Predicted Zn-dependent peptidases compare
Psest_4045 -0.9 -2.6 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen compare
Psest_3904 -0.8 -0.8 hypothetical protein compare
Psest_0187 -0.8 -1.7 Metal-dependent hydrolase compare
Psest_0508 -0.8 -4.0 gamma-glutamyl phosphate reductase compare
Psest_2786 -0.8 -0.6 Domain of unknown function (DUF3597). compare
Psest_1938 -0.8 -3.5 hypothetical protein compare
Psest_2545 -0.8 -1.8 recombination protein RecR compare
Psest_0175 -0.8 -4.0 Xaa-Pro aminopeptidase compare
Psest_0737 -0.8 -0.6 Cu(I)-responsive transcriptional regulator compare
Psest_1431 -0.8 -3.2 hypothetical protein compare
Psest_1765 -0.8 -3.0 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_1149 -0.8 -1.8 Protein affecting phage T7 exclusion by the F plasmid compare
Psest_1456 -0.8 -1.8 Protein of unknown function (DUF2892). compare
Psest_1217 -0.8 -3.1 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein compare
Psest_1087 -0.8 -0.7 uncharacterized peroxidase-related enzyme compare
Psest_0442 -0.8 -1.1 ATPases of the AAA+ class compare
Psest_1813 -0.8 -3.6 pseudaminic acid biosynthesis-associated protein PseG compare
Psest_3128 -0.8 -2.7 Protein-disulfide isomerase compare
Psest_3809 -0.8 -2.8 hypothetical protein compare
Psest_3297 -0.8 -4.5 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
Psest_2135 -0.8 -3.0 Peroxiredoxin compare
Psest_0397 -0.8 -4.2 Small-conductance mechanosensitive channel compare
Psest_3110 -0.8 -2.8 Enoyl-CoA hydratase/carnithine racemase compare
Psest_3944 -0.8 -1.7 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
Psest_0678 -0.8 -1.8 yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region compare
Psest_2992 -0.8 -2.7 Uncharacterized conserved protein compare
Psest_2358 -0.8 -1.6 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Psest_1943 -0.8 -3.6 MoxR-like ATPases compare
Psest_0778 -0.8 -2.2 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin compare
Psest_1226 -0.8 -2.2 hypothetical protein compare
Psest_1863 -0.8 -1.6 hypothetical protein compare
Psest_1242 -0.8 -1.2 tRNA-guanine transglycosylase, queuosine-34-forming compare
Psest_2565 -0.8 -1.7 Transcriptional regulator compare
Psest_1783 -0.8 -2.2 Predicted transporter component compare
Psest_2240 -0.8 -1.1 hypothetical protein compare
Psest_3921 -0.7 -0.9 Uncharacterized protein conserved in bacteria compare
Psest_3287 -0.7 -2.0 Type II secretory pathway, component PulF compare
Psest_3316 -0.7 -4.0 Predicted P-loop-containing kinase compare
Psest_2645 -0.7 -2.9 Transcriptional regulator compare
Psest_0191 -0.7 -0.6 PAS domain S-box compare
Psest_1804 -0.7 -1.0 Superfamily II DNA and RNA helicases compare
Psest_2698 -0.7 -2.7 benzoate 1,2-dioxygenase, small subunit compare


Specific Phenotypes

For 15 genes in this experiment

For stress Phosphomycin disodium salt in Pseudomonas stutzeri RCH2

For stress Phosphomycin disodium salt across organisms