Experiment set10S156 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 10mM L-Proline

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS08320 +2.0 8.0 molybdopterin molybdotransferase MoeA compare
MMP_RS02885 +1.9 10.2 molybdopterin biosynthesis protein compare
MMP_RS07765 +1.8 5.6 sodium:alanine symporter family protein compare
MMP_RS08310 +1.8 2.9 TMEM165/GDT1 family protein compare
MMP_RS06715 +1.8 8.6 cache domain-containing protein compare
MMP_RS04885 +1.7 7.1 sulfite exporter TauE/SafE family protein compare
MMP_RS06720 +1.5 3.7 response regulator transcription factor compare
MMP_RS00430 +1.4 3.5 hypothetical protein compare
MMP_RS02045 +1.3 1.8 tRNA-Met compare
MMP_RS06600 +1.3 0.8 class III signal peptide-containing protein compare
MMP_RS08760 +1.3 2.3 hypothetical protein compare
MMP_RS00325 +1.3 1.8 RNA-binding protein compare
MMP_RS05975 +1.2 1.5 hypothetical protein compare
MMP_RS00675 +1.2 1.1 nitroreductase family protein compare
MMP_RS06540 +1.1 2.6 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMP_RS02290 +1.0 4.9 MBL fold metallo-hydrolase compare
MMP_RS00185 +1.0 6.1 potassium channel protein compare
MMP_RS03220 +1.0 2.1 RNA 2' 3'-cyclic phosphodiesterase compare
MMP_RS06325 +1.0 1.2 hypothetical protein compare
MMP_RS01570 +1.0 1.2 hypothetical protein compare
MMP_RS00155 +1.0 2.9 heavy metal-binding domain-containing protein compare
MMP_RS07835 +1.0 3.3 TldD/PmbA family protein compare
MMP_RS06685 +1.0 4.8 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS03385 +1.0 1.0 cation diffusion facilitator family transporter compare
MMP_RS02410 +0.9 1.5 ABC transporter substrate-binding protein compare
MMP_RS02390 +0.9 3.6 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMP_RS08725 +0.9 0.8 Ni/Fe hydrogenase subunit alpha compare
MMP_RS06585 +0.9 1.3 DMT family protein compare
MMP_RS06745 +0.9 3.4 DUF2119 domain-containing protein compare
MMP_RS06345 +0.9 3.8 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMP_RS06525 +0.9 1.0 YciI family protein compare
MMP_RS07840 +0.9 1.1 ribonuclease III compare
MMP_RS06905 +0.9 1.1 hypothetical protein compare
MMP_RS08445 +0.9 1.9 DUF2099 family protein compare
MMP_RS06840 +0.9 0.6 DNA-directed RNA polymerase subunit N compare
MMP_RS00345 +0.9 1.9 DUF2666 domain-containing protein compare
MMP_RS06545 +0.8 2.0 ferredoxin family protein compare
MMP_RS06870 +0.8 2.9 DedA family protein compare
MMP_RS07890 +0.8 1.3 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS01200 +0.8 2.3 hypothetical protein compare
MMP_RS07620 +0.8 2.4 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS08835 +0.8 4.2 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein compare
MMP_RS00290 +0.8 2.2 hypothetical protein compare
MMP_RS07560 +0.8 2.1 prefoldin subunit alpha compare
MMP_RS06075 +0.8 3.0 class I SAM-dependent methyltransferase compare
MMP_RS07850 +0.8 1.1 prephenate dehydratase compare
MMP_RS04775 +0.8 1.4 adenosylhomocysteinase compare
MMP_RS08775 +0.7 1.9 methanogenesis marker 9 domain-containing protein compare
MMP_RS07815 +0.7 0.7 DUF2120 domain-containing protein compare
MMP_RS05720 +0.7 1.2 signal recognition particle subunit SRP19/SEC65 family protein compare
MMP_RS08260 +0.7 2.2 DUF99 family protein compare
MMP_RS05090 +0.7 2.4 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMP_RS08395 +0.7 2.1 DsrE family protein compare
MMP_RS03150 +0.7 3.4 phosphoglycerate mutase compare
MMP_RS01145 +0.7 2.5 ABC transporter ATP-binding protein compare
MMP_RS00960 +0.7 1.7 iron export ABC transporter permease subunit FetB compare
MMP_RS01055 +0.7 1.4 hypothetical protein compare
MMP_RS07625 +0.7 1.0 cobalt ECF transporter T component CbiQ compare
MMP_RS08390 +0.7 2.3 DUF5400 domain-containing protein compare
MMP_RS07915 +0.7 1.6 DUF4870 domain-containing protein compare
MMP_RS07095 +0.7 1.8 PspC domain-containing protein compare
MMP_RS01135 +0.7 2.7 molybdate ABC transporter substrate-binding protein compare
MMP_RS05435 +0.7 2.0 5'/3'-nucleotidase SurE compare
MMP_RS08235 +0.7 2.6 hypothetical protein compare
MMP_RS00855 +0.7 1.9 DUF367 family protein compare
MMP_RS06320 +0.7 2.0 hypothetical protein compare
MMP_RS01160 +0.6 2.0 DMT family transporter compare
MMP_RS08555 +0.6 1.1 hypothetical protein compare
MMP_RS06590 +0.6 1.5 GNAT family N-acetyltransferase compare
MMP_RS02300 +0.6 2.7 NAD(P)H-dependent oxidoreductase compare
MMP_RS01965 +0.6 1.6 DUF1616 domain-containing protein compare
MMP_RS06215 +0.6 1.0 30S ribosomal protein S6e compare
MMP_RS08410 +0.6 2.3 DUF169 domain-containing protein compare
MMP_RS01785 +0.6 2.3 hypothetical protein compare
MMP_RS07630 +0.6 0.7 ATP-binding cassette domain-containing protein compare
MMP_RS01240 +0.6 0.5 7-cyano-7-deazaguanine synthase QueC compare
MMP_RS05675 +0.6 0.9 phosphate ABC transporter ATP-binding protein PstB compare
MMP_RS05510 +0.6 1.5 Rrf2 family transcriptional regulator compare
MMP_RS06250 +0.6 1.9 hypothetical protein compare
MMP_RS00375 +0.6 2.4 ammonium transporter compare
MMP_RS08275 +0.6 1.9 hypothetical protein compare
MMP_RS05835 +0.6 0.5 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMP_RS04190 +0.6 2.8 hypothetical protein compare
MMP_RS05110 +0.6 2.3 16S ribosomal RNA methyltransferase A compare
MMP_RS00660 +0.6 2.6 alkaline phosphatase family protein compare
MMP_RS03065 +0.6 1.1 AzlC family ABC transporter permease compare
MMP_RS06375 +0.6 1.8 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS00650 +0.6 2.0 ABC transporter ATP-binding protein compare
MMP_RS02605 +0.5 0.3 MotA/TolQ/ExbB proton channel family protein compare
MMP_RS07195 +0.5 2.1 M20 family metallo-hydrolase compare
MMP_RS05780 +0.5 2.1 multidrug resistance efflux transporter family protein compare
MMP_RS05470 +0.5 2.0 DUF523 and DUF1722 domain-containing protein compare
MMP_RS06705 +0.5 1.6 formate/nitrite transporter family protein compare
MMP_RS04800 +0.5 2.1 chemotaxis protein CheW compare
MMP_RS03490 +0.5 0.7 DUF2115 domain-containing protein compare
MMP_RS06910 +0.5 2.3 RlmF-related methyltransferase compare
MMP_RS00545 +0.5 1.1 XRE family transcriptional regulator compare
MMP_RS08890 +0.5 2.8 glycosyltransferase family 4 protein compare
MMP_RS08430 +0.5 1.4 HAD family hydrolase compare
MMP_RS00565 +0.5 1.6 CBS domain-containing protein compare
MMP_RS03890 +0.5 1.3 DUF2540 domain-containing protein compare
MMP_RS00085 +0.5 2.5 DNA cytosine methyltransferase compare
MMP_RS00195 +0.5 3.8 DUF4013 domain-containing protein compare
MMP_RS01640 +0.5 2.4 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMP_RS09065 +0.5 2.7 hypothetical protein compare
MMP_RS01100 +0.5 0.5 ABC transporter ATP-binding protein compare
MMP_RS05130 +0.5 3.2 DUF2226 domain-containing protein compare
MMP_RS05315 +0.5 0.7 hypothetical protein compare
MMP_RS04635 +0.5 2.4 GNAT family N-acetyltransferase compare
MMP_RS06065 +0.5 3.2 iron ABC transporter substrate-binding protein compare
MMP_RS07125 +0.5 0.7 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS01060 +0.5 2.2 calcium/sodium antiporter compare
MMP_RS08090 +0.5 1.1 hypothetical protein compare
MMP_RS06005 +0.5 1.4 heavy-metal-associated domain-containing protein compare
MMP_RS00335 +0.5 1.0 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMP_RS05825 +0.5 1.3 peptidyl-prolyl cis-trans isomerase compare
MMP_RS08130 +0.5 2.1 IGHMBP2 family helicase compare
MMP_RS05365 +0.5 0.7 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMP_RS01620 +0.5 1.2 hypothetical protein compare
MMP_RS03480 +0.5 2.2 SulP family inorganic anion transporter compare
MMP_RS00940 +0.5 1.5 daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein compare
MMP_RS02415 +0.4 0.8 site-specific integrase compare
MMP_RS08240 +0.4 1.2 methanogenesis marker 16 metalloprotein compare
MMP_RS00395 +0.4 0.5 MGMT family protein compare
MMP_RS02915 +0.4 0.9 amino acid ABC transporter permease compare
MMP_RS05065 +0.4 0.7 CooT family nickel-binding protein compare
MMP_RS07645 +0.4 1.3 aldehyde dehydrogenase family protein compare
MMP_RS01210 +0.4 1.9 sodium:solute symporter compare
MMP_RS01150 +0.4 1.1 aldo/keto reductase compare
MMP_RS07145 +0.4 1.8 AmmeMemoRadiSam system protein B compare
MMP_RS08630 +0.4 1.5 archaellar assembly protein FlaJ compare
MMP_RS01645 +0.4 0.8 SWIM zinc finger family protein compare
MMP_RS00800 +0.4 1.7 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS07155 +0.4 1.4 MFS transporter compare
MMP_RS04120 +0.4 1.8 hypothetical protein compare
MMP_RS09060 +0.4 2.4 hypothetical protein compare
MMP_RS07650 +0.4 2.1 TldD/PmbA family protein compare
MMP_RS03465 +0.4 0.4 adenine phosphoribosyltransferase compare
MMP_RS02085 +0.4 1.6 inosine/xanthosine triphosphatase compare
MMP_RS08770 +0.4 1.2 hypothetical protein compare
MMP_RS01475 +0.4 1.3 phosphosulfolactate synthase compare
MMP_RS02490 +0.4 1.0 hypothetical protein compare
MMP_RS01525 +0.4 0.6 nucleoside-diphosphate kinase compare
MMP_RS04225 +0.4 1.4 hypothetical protein compare
MMP_RS05940 +0.4 1.9 corrinoid protein compare
MMP_RS04260 +0.4 1.4 coenzyme F420 hydrogenase subunit gamma compare
MMP_RS03540 +0.4 0.8 DUF2178 domain-containing protein compare
MMP_RS04035 +0.4 0.8 hypothetical protein compare
MMP_RS04945 +0.4 1.7 hypothetical protein compare
MMP_RS01120 +0.4 1.3 permease compare
MMP_RS06655 +0.4 2.1 glycoside hydrolase family 15 protein compare
MMP_RS08075 +0.4 1.0 DUF749 domain-containing protein compare
MMP_RS08980 +0.4 0.9 hypothetical protein compare
MMP_RS06070 +0.4 2.0 iron ABC transporter substrate-binding protein compare
MMP_RS04550 +0.4 2.7 S-layer protein compare
MMP_RS01320 +0.4 1.2 hypothetical protein compare
MMP_RS03740 +0.4 1.3 indolepyruvate oxidoreductase subunit beta compare
MMP_RS07985 +0.4 1.8 nitroreductase family protein compare
MMP_RS07615 +0.4 1.5 energy-coupling factor ABC transporter permease compare
MMP_RS05155 +0.4 1.7 hypothetical protein compare
MMP_RS00450 +0.4 0.4 4Fe-4S binding protein compare
MMP_RS03100 +0.4 1.0 hypothetical protein compare
MMP_RS03615 +0.4 1.7 4Fe-4S binding protein compare
MMP_RS01030 +0.4 0.6 MTAP family purine nucleoside phosphorylase compare
MMP_RS02995 +0.4 1.2 acyl-CoA thioesterase compare
MMP_RS07590 +0.4 1.9 hypothetical protein compare
MMP_RS01855 +0.3 1.0 2-hydroxyacyl-CoA dehydratase family protein compare
MMP_RS03215 +0.3 1.7 MBL fold metallo-hydrolase compare
MMP_RS05695 +0.3 1.0 phospholipase D-like domain-containing protein compare
MMP_RS08245 +0.3 1.4 DUF4013 domain-containing protein compare
MMP_RS02965 +0.3 1.1 carboxymuconolactone decarboxylase family protein compare
MMP_RS00880 +0.3 0.8 ribosome assembly RNA-binding protein YhbY compare
MMP_RS04985 +0.3 1.0 DUF2180 family protein compare
MMP_RS01685 +0.3 0.5 indolepyruvate oxidoreductase subunit beta compare
MMP_RS00975 +0.3 1.4 HD domain-containing protein compare
MMP_RS05995 +0.3 1.6 FprA family A-type flavoprotein compare
MMP_RS04960 +0.3 1.9 cytochrome c biogenesis CcdA family protein compare
MMP_RS05055 +0.3 2.0 DUF166 domain-containing protein compare
MMP_RS07150 +0.3 0.8 MTH895/ArsE family thioredoxin-like protein compare
MMP_RS01550 +0.3 1.1 DUF1624 domain-containing protein compare
MMP_RS08205 +0.3 1.1 stage II sporulation protein M compare
MMP_RS02100 +0.3 0.7 metallophosphoesterase compare
MMP_RS07770 +0.3 0.8 alanine racemase compare
MMP_RS07425 +0.3 0.9 GTP-binding protein compare
MMP_RS06680 +0.3 1.6 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS02380 +0.3 1.4 ATP-binding protein compare
MMP_RS00475 +0.3 1.1 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS00705 +0.3 0.6 hypothetical protein compare
MMP_RS02645 +0.3 1.1 ArsR family transcriptional regulator compare
MMP_RS09030 +0.3 1.1 hypothetical protein compare
MMP_RS02895 +0.3 1.3 DHH family phosphoesterase compare
MMP_RS04205 +0.3 1.3 carboxymuconolactone decarboxylase family protein compare
MMP_RS03885 +0.3 1.1 tyrosine-type recombinase/integrase compare
MMP_RS01625 +0.3 1.5 rubredoxin compare
MMP_RS08085 +0.3 1.6 hypothetical protein compare
MMP_RS01845 +0.3 1.5 hypothetical protein compare
MMP_RS04000 +0.3 1.6 NAD(P)/FAD-dependent oxidoreductase compare
MMP_RS08490 +0.3 1.8 hypothetical protein compare
MMP_RS08455 +0.3 0.5 multiprotein bridging factor aMBF1 compare
MMP_RS01435 +0.3 0.7 DMT family transporter compare


Specific Phenotypes

For 1 genes in this experiment

For nitrogen source L-Proline in Methanococcus maripaludis S2

For nitrogen source L-Proline across organisms