| | gene | name | fitness | t score | description | |
|---|
| b1185 | dsbB | +2.8 | 8.3 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b2113 | mrp | +2.5 | 12.9 | putative ATPase (VIMSS) | compare |
| b1764 | selD | +2.3 | 14.3 | selenophosphate synthetase (NCBI) | compare |
| b2279 | nuoK | +2.3 | 4.6 | NADH dehydrogenase subunit K (NCBI) | compare |
| b2688 | gshA | +2.2 | 13.5 | glutamate--cysteine ligase (NCBI) | compare |
| b3860 | dsbA | +2.2 | 14.5 | periplasmic protein disulfide isomerase I (NCBI) | compare |
| b3893 | fdoH | +2.2 | 17.9 | formate dehydrogenase-O, Fe-S subunit (NCBI) | compare |
| b3591 | selA | +2.2 | 19.6 | selenocysteine synthase (NCBI) | compare |
| b3892 | fdoI | +2.2 | 15.9 | formate dehydrogenase-O, cytochrome b556 subunit (NCBI) | compare |
| b3590 | selB | +2.2 | 18.7 | selenocysteinyl-tRNA-specific translation factor (NCBI) | compare |
| b3894 | fdoG | +2.2 | 19.6 | formate dehydrogenase-O, large subunit (NCBI) | compare |
| b2618 | b2618 | +2.2 | 6.2 | orf, hypothetical protein (VIMSS) | compare |
| b1627 | rsxA | +2.1 | 6.7 | Na(+)-translocating NADH-quinone reductase subunit E (NCBI) | compare |
| b3169 | nusA | +2.1 | 5.7 | transcription elongation factor NusA (NCBI) | compare |
| b3806 | cyaA | +2.1 | 9.6 | adenylate cyclase (NCBI) | compare |
| b3891 | fdhE | +2.0 | 16.0 | formate dehydrogenase accessory protein FdhE (NCBI) | compare |
| b3895 | fdhD | +2.0 | 14.3 | formate dehydrogenase accessory protein (NCBI) | compare |
| b1630 | rsxD | +2.0 | 9.9 | electron transport complex protein RnfD (NCBI) | compare |
| b3844 | fre | +2.0 | 13.2 | NAD(P)H-flavin reductase (NCBI) | compare |
| b1632 | rsxE | +1.9 | 9.6 | NADH-ubiquinone oxidoreductase (NCBI) | compare |
| b2214 | yojL | +1.9 | 10.6 | predicted thiamine biosynthesis lipoprotein (NCBI) | compare |
| b0464 | acrR | +1.9 | 14.7 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2947 | gshB | +1.9 | 8.6 | glutathione synthetase (NCBI) | compare |
| b3658 | selC | +1.8 | 4.7 | tRNA-Sec (NCBI) | compare |
| b3977 | tyrU | +1.8 | 1.8 | tRNA-Tyr (NCBI) | compare |
| b0683 | fur | +1.7 | 3.7 | ferric uptake regulator (NCBI) | compare |
| b0764 | modB | +1.6 | 7.6 | molybdate ABC transporter permease protein (NCBI) | compare |
| b0439 | lon | +1.5 | 7.7 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b0765 | modC | +1.5 | 8.6 | molybdate transporter subunit (NCBI) | compare |
| b0763 | modA | +1.5 | 8.9 | molybdate transporter subunit (NCBI) | compare |
| b1628 | rsxB | +1.5 | 3.6 | electron transport complex protein RnfB (NCBI) | compare |
| b3414 | gntY | +1.5 | 7.8 | predicted gluconate transport associated protein (NCBI) | compare |
| b1629 | rsxC | +1.5 | 7.0 | electron transport complex protein RnfC (NCBI) | compare |
| b2283 | nuoG | +1.5 | 9.0 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b2377 | yfdY | +1.4 | 3.6 | predicted inner membrane protein (NCBI) | compare |
| b4538 | yoeF | +1.4 | 2.1 | hypothetical protein (RefSeq) | compare |
| b4221 | ytfN | +1.4 | 12.2 | hypothetical protein (NCBI) | compare |
| b4220 | ytfM | +1.3 | 10.9 | predicted outer membrane protein and surface antigen (NCBI) | compare |
| b0726 | sucA | +1.3 | 5.5 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b0015 | dnaJ | +1.3 | 7.8 | chaperone Hsp40, co-chaperone with DnaK (NCBI) | compare |
| b0858 | ybjO | +1.3 | 3.6 | predicted inner membrane protein (NCBI) | compare |
| b0125 | hpt | +1.3 | 5.5 | hypoxanthine phosphoribosyltransferase (VIMSS) | compare |
| b2286 | nuoC | +1.3 | 7.3 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b2570 | rseC | +1.3 | 6.5 | RseC protein involved in reduction of the SoxR iron-sulfur cluster (NCBI) | compare |
| b2934 | cmtB | +1.3 | 1.2 | predicted mannitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b0826 | moeB | +1.3 | 7.9 | molybdopterin biosynthesis protein MoeB (NCBI) | compare |
| b0827 | moeA | +1.2 | 6.9 | molybdopterin biosynthesis protein (NCBI) | compare |
| b1882 | cheY | +1.2 | 0.7 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b2531 | iscR | +1.2 | 1.9 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0798 | ybiA | +1.2 | 3.4 | hypothetical protein (NCBI) | compare |
| b0783 | moaC | +1.2 | 5.2 | molybdenum cofactor biosynthesis protein C (NCBI) | compare |
| b2285 | nuoE | +1.2 | 3.0 | NADH dehydrogenase subunit E (NCBI) | compare |
| b0784 | moaD | +1.1 | 2.4 | molybdopterin synthase, small subunit (NCBI) | compare |
| b1252 | tonB | +1.1 | 4.1 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b2277 | nuoM | +1.1 | 6.0 | NADH dehydrogenase subunit M (NCBI) | compare |
| b2642 | yfjW | +1.1 | 0.8 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b1279 | yciS | +1.1 | 1.2 | conserved inner membrane protein (NCBI) | compare |
| b0781 | moaA | +1.1 | 6.8 | molybdenum cofactor biosynthesis protein A (NCBI) | compare |
| b2278 | nuoL | +1.1 | 7.1 | NADH dehydrogenase subunit L (NCBI) | compare |
| b2684 | mprA | +1.0 | 4.2 | DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux (NCBI) | compare |
| b2282 | nuoH | +1.0 | 3.1 | NADH dehydrogenase subunit H (NCBI) | compare |
| b1263 | trpD | +1.0 | 2.2 | bifunctional indole-3-glycerol-phosphate synthase/anthranilate phosphoribosyltransferase (NCBI) | compare |
| b2698 | recX | +1.0 | 3.0 | RecA regulator RecX (NCBI) | compare |
| b4241 | treR | +1.0 | 6.9 | trehalose repressor (NCBI) | compare |
| b3807 | cyaY | +1.0 | 4.8 | frataxin-like protein (NCBI) | compare |
| b1382 | ynbE | +1.0 | 1.6 | predicted lipoprotein (NCBI) | compare |
| b4596 | yciZ | +1.0 | 1.8 | hypothetical protein (RefSeq) | compare |
| b1524 | yneH | +1.0 | 0.8 | predicted glutaminase (NCBI) | compare |
| b2276 | nuoN | +1.0 | 3.4 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b0009 | mog | +1.0 | 6.1 | molybdenum cofactor biosynthesis protein (NCBI) | compare |
| b1553 | ydfP | +1.0 | 2.7 | Qin prophage; conserved protein (NCBI) | compare |
| b4171 | miaA | +1.0 | 2.9 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b2708 | gutQ | +1.0 | 2.7 | orf, hypothetical protein (VIMSS) | compare |
| b1475 | fdnH | +0.9 | 3.4 | formate dehydrogenase-N, Fe-S (beta) subunit, nitrate-inducible (NCBI) | compare |
| b2951 | yggS | +0.9 | 3.5 | predicted enzyme (NCBI) | compare |
| b3006 | exbB | +0.9 | 6.0 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b2083 | yegZ | +0.9 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b0785 | moaE | +0.9 | 4.9 | molybdopterin synthase, large subunit (NCBI) | compare |
| b1346 | ydaQ | +0.9 | 0.7 | orf, hypothetical protein (VIMSS) | compare |
| b4407 | thiS | +0.9 | 2.3 | sulfur carrier protein ThiS (NCBI) | compare |
| b2093 | gatB | +0.9 | 3.5 | galactitol-specific enzyme IIB component of PTS (NCBI) | compare |
| b2614 | grpE | +0.9 | 1.5 | heat shock protein (NCBI) | compare |
| b2939 | yqgB | +0.9 | 1.2 | predicted protein (RefSeq) | compare |
| b2617 | smpA | +0.9 | 2.2 | small membrane protein A (VIMSS) | compare |
| b0429 | cyoD | +0.9 | 3.6 | cytochrome o ubiquinol oxidase subunit IV (NCBI) | compare |
| b2281 | nuoI | +0.9 | 2.6 | NADH dehydrogenase subunit I (NCBI) | compare |
| b1684 | sufA | +0.9 | 1.8 | iron-sulfur cluster assembly scaffold protein (NCBI) | compare |
| b2208 | napF | +0.9 | 2.9 | ferredoxin-type protein, predicted role in electron transfer to periplasmic nitrate reductase (NapA) (NCBI) | compare |
| b3836 | b3836 | +0.9 | 3.8 | orf, hypothetical protein (VIMSS) | compare |
| b1134 | ymfB | +0.9 | 2.1 | bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase (NCBI) | compare |
| b1486 | ddpB | +0.9 | 2.0 | D-ala-D-ala transporter subunit (NCBI) | compare |
| b0720 | gltA | +0.8 | 4.3 | citrate synthase (NCBI) | compare |
| b4418 | sraB | +0.8 | 1.2 | unknown RNA (NCBI) | compare |
| b1305 | pspB | +0.8 | 1.6 | phage shock protein B (NCBI) | compare |
| b2080 | b2080 | +0.8 | 1.6 | orf, hypothetical protein (VIMSS) | compare |
| b4699 | fnrS | +0.8 | 0.7 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b1095 | fabF | +0.8 | 3.9 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b1917 | yecC | +0.8 | 2.6 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b3181 | greA | +0.8 | 2.5 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b0418 | pgpA | +0.8 | 3.2 | phosphatidylglycerophosphatase A (NCBI) | compare |
| b1777 | b1777 | +0.8 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b1959 | yedA | +0.8 | 2.2 | predicted inner membrane protein (NCBI) | compare |
| b0678 | nagB | +0.8 | 3.5 | glucosamine-6-phosphate deaminase (NCBI) | compare |
| b0724 | sdhB | +0.8 | 3.5 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b1516 | lsrB | +0.8 | 2.0 | AI2 transporter (NCBI) | compare |
| b2419 | yfeK | +0.8 | 1.4 | hypothetical protein (NCBI) | compare |
| b0641 | rlpB | +0.8 | 0.8 | minor lipoprotein (NCBI) | compare |
| b2811 | ygdK | +0.7 | 2.7 | predicted Fe-S metabolism protein (NCBI) | compare |
| b2518 | ndk | +0.7 | 1.5 | nucleoside diphosphate kinase (NCBI) | compare |
| b1890 | motA | +0.7 | 1.8 | flagellar motor protein MotA (NCBI) | compare |
| b1699 | ydiS | +0.7 | 1.7 | predicted oxidoreductase with FAD/NAD(P)-binding domain (NCBI) | compare |
| b0430 | cyoC | +0.7 | 2.5 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b2284 | nuoF | +0.7 | 2.8 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b3029 | ygiN | +0.7 | 2.2 | quinol monooxygenase (NCBI) | compare |
| b0926 | ycbK | +0.7 | 2.9 | hypothetical protein (NCBI) | compare |
| b2229 | b2229 | +0.7 | 2.0 | orf, hypothetical protein (VIMSS) | compare |
| b2288 | nuoA | +0.7 | 2.3 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b1853 | yebK | +0.7 | 1.6 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3857 | mobA | +0.7 | 4.5 | molybdopterin-guanine dinucleotide biosynthesis protein A (NCBI) | compare |
| b1090 | plsX | +0.7 | 2.4 | glycerolphosphate auxotrophy in plsB background (VIMSS) | compare |
| b1677 | lpp | +0.7 | 1.7 | murein lipoprotein (NCBI) | compare |
| b1253 | yciA | +0.7 | 2.1 | predicted hydrolase (NCBI) | compare |
| b3493 | pitA | +0.7 | 4.3 | phosphate transporter, low-affinity (NCBI) | compare |
| b2448 | yffQ | +0.7 | 1.5 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b2953 | yggU | +0.7 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b1433 | b1433 | +0.7 | 1.9 | putative membrane transport protein (VIMSS) | compare |
| b2906 | visC | +0.7 | 3.9 | hypothetical protein (NCBI) | compare |
| b3257 | yhdT | +0.7 | 1.7 | conserved inner membrane protein (NCBI) | compare |
| b0840 | deoR | +0.7 | 2.1 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2725 | hycA | +0.7 | 2.2 | regulator of the transcriptional regulator FhlA (NCBI) | compare |
| b3365 | nirB | +0.7 | 5.1 | nitrite reductase, large subunit, NAD(P)H-binding (NCBI) | compare |
| b0428 | cyoE | +0.7 | 3.6 | protoheme IX farnesyltransferase (NCBI) | compare |
| b2340 | sixA | +0.7 | 2.4 | phosphohistidine phosphatase (NCBI) | compare |
| b1577 | ydfE | +0.7 | 3.4 | Qin prophage; predicted protein (RefSeq) | compare |
| b2905 | gcvT | +0.7 | 3.7 | glycine cleavage system aminomethyltransferase T (NCBI) | compare |
| b0249 | ykfF | +0.7 | 2.0 | CP4-6 prophage; predicted protein (NCBI) | compare |
| b1412 | azoR | +0.7 | 1.6 | acyl carrier protein phosphodiesterase (NCBI) | compare |
| b1615 | uidC | +0.7 | 2.2 | membrane-associated protein (VIMSS) | compare |
| b1751 | ydjY | +0.7 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b3611 | yibN | +0.7 | 2.4 | predicted rhodanese-related sulfurtransferase (NCBI) | compare |
| b2188 | yejM | +0.7 | 3.9 | predicted hydrolase, inner membrane (NCBI) | compare |
| b0920 | ycbC | +0.7 | 1.8 | conserved inner membrane protein (NCBI) | compare |
| b3341 | rpsG | +0.7 | 0.9 | 30S ribosomal protein S7 (NCBI) | compare |
| b1806 | yeaY | +0.6 | 2.0 | predicted lipoprotein (NCBI) | compare |
| b3221 | yhcH | +0.6 | 2.8 | hypothetical protein (NCBI) | compare |
| b3151 | yraQ | +0.6 | 3.4 | predicted permease (NCBI) | compare |
| b3199 | yrbK | +0.6 | 1.1 | hypothetical protein (NCBI) | compare |
| b2280 | nuoJ | +0.6 | 2.8 | NADH dehydrogenase subunit J (NCBI) | compare |
| b3205 | yhbJ | +0.6 | 1.7 | hypothetical protein (NCBI) | compare |
| b0431 | cyoB | +0.6 | 4.1 | cytochrome o ubiquinol oxidase subunit I (NCBI) | compare |
| b0767 | ybhE | +0.6 | 2.4 | 6-phosphogluconolactonase (NCBI) | compare |
| b2240 | glpT | +0.6 | 4.0 | sn-glycerol-3-phosphate transporter (NCBI) | compare |
| b1296 | ycjJ | +0.6 | 1.7 | putative amino acid/amine transport protein (VIMSS) | compare |
| b4533 | ynfO | +0.6 | 1.1 | Qin prophage; predicted protein (NCBI) | compare |
| b0723 | sdhA | +0.6 | 4.1 | succinate dehydrogenase flavoprotein subunit (NCBI) | compare |
| b4406 | yaeP | +0.6 | 1.0 | hypothetical protein (NCBI) | compare |
| b0987 | ymcD | +0.6 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b2683 | ygaH | +0.6 | 2.7 | predicted inner membrane protein (NCBI) | compare |
| b3698 | yidB | +0.6 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b3033 | yqiB | +0.6 | 1.7 | predicted dehydrogenase (NCBI) | compare |
| b4385 | yjjJ | +0.6 | 4.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1467 | narY | +0.6 | 2.7 | nitrate reductase 2 (NRZ), beta subunit (NCBI) | compare |
| b0191 | yaeJ | +0.6 | 2.1 | hypothetical protein (NCBI) | compare |
| b1200 | b1200 | +0.6 | 2.6 | putative dihydroxyacetone kinase (EC 2.7.1.2) (VIMSS) | compare |
| b1587 | ynfE | +0.6 | 2.5 | oxidoreductase subunit (NCBI) | compare |
| b2597 | yfiA | +0.6 | 1.1 | cold shock protein associated with 30S ribosomal subunit (NCBI) | compare |
| b0432 | cyoA | +0.6 | 4.1 | cytochrome o ubiquinol oxidase subunit II (NCBI) | compare |
| b2587 | kgtP | +0.6 | 3.3 | alpha-ketoglutarate transporter (NCBI) | compare |
| b0427 | yajR | +0.6 | 3.6 | putative transport protein (VIMSS) | compare |
| b1633 | nth | +0.6 | 2.3 | DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) (NCBI) | compare |
| b1680 | sufS | +0.6 | 3.2 | selenocysteine lyase (NCBI) | compare |
| b2586 | yfiM | +0.6 | 2.0 | predicted protein (RefSeq) | compare |
| b3522 | yhjD | +0.6 | 3.5 | conserved inner membrane protein (NCBI) | compare |
| b1809 | b1809 | +0.6 | 2.6 | orf, hypothetical protein (VIMSS) | compare |
| b1390 | paaC | +0.6 | 1.1 | predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation (NCBI) | compare |
| b1418 | cybB | +0.6 | 1.9 | cytochrome b(561) (VIMSS) | compare |
| b3057 | bacA | +0.6 | 3.0 | undecaprenyl pyrophosphate phosphatase (NCBI) | compare |
| b1841 | yobA | +0.6 | 1.0 | hypothetical protein (NCBI) | compare |
| b1846 | yebE | +0.6 | 2.0 | hypothetical protein (NCBI) | compare |
| b2937 | speB | +0.6 | 2.8 | agmatinase (NCBI) | compare |
| b3775 | ppiC | +0.6 | 2.5 | peptidyl-prolyl cis-trans isomerase C (rotamase C) (NCBI) | compare |
| b0714 | nei | +0.6 | 2.7 | endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase (NCBI) | compare |
| b0862 | artQ | +0.6 | 1.3 | arginine transporter subunit (NCBI) | compare |
| b4634 | ylcF | +0.6 | 3.0 | no description | compare |
| b0114 | aceE | +0.6 | 1.0 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b4649 | ysaD | +0.6 | 1.3 | no description | compare |
| b3780 | rhlB | +0.6 | 3.8 | ATP-dependent RNA helicase (NCBI) | compare |
| b2195 | ccmG | +0.6 | 1.4 | periplasmic thioredoxin of cytochrome c-type biogenesis (NCBI) | compare |
| b1270 | btuR | +0.6 | 2.0 | cob(I)yrinic acid a,c-diamide adenosyltransferase (NCBI) | compare |
| b2293 | yfbT | +0.6 | 0.9 | putative phosphatase (VIMSS) | compare |
| b1434 | ydcN | +0.6 | 0.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1427 | rimL | +0.6 | 1.3 | ribosomal-protein-L7/L12-serine acetyltransferase (NCBI) | compare |
| b1679 | sufE | +0.6 | 1.8 | cysteine desufuration protein SufE (NCBI) | compare |
| b2047 | wcaJ | +0.6 | 1.6 | predicted UDP-glucose lipid carrier transferase (NCBI) | compare |
| b3425 | glpE | +0.6 | 2.4 | thiosulfate sulfurtransferase (NCBI) | compare |
| b0880 | cspD | +0.6 | 1.0 | cold shock protein homolog (NCBI) | compare |
| b2510 | b2510 | +0.6 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b0146 | sfsA | +0.6 | 3.3 | sugar fermentation stimulation protein A (NCBI) | compare |
| b4394 | yjjX | +0.6 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b2058 | wcaB | +0.6 | 0.5 | predicted acyl transferase (NCBI) | compare |