| | gene | name | fitness | t score | description | |
|---|
| b4201 | priB | -4.6 | -3.1 | primosomal replication protein N (NCBI) | compare |
| b3035 | tolC | -3.7 | -8.6 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b0463 | acrA | -3.2 | -11.1 | multidrug efflux system (NCBI) | compare |
| b0462 | acrB | -3.2 | -16.7 | multidrug efflux system protein (NCBI) | compare |
| b1334 | fnr | -3.0 | -2.9 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b1361 | ydaW | -2.9 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b2528 | iscA | -2.7 | -2.4 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b2509 | xseA | -2.5 | -8.6 | exodeoxyribonuclease VII large subunit (NCBI) | compare |
| b3390 | aroK | -2.4 | -2.3 | shikimate kinase I (NCBI) | compare |
| b1575 | dicB | -2.4 | -2.2 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b1863 | ruvC | -2.3 | -1.6 | Holliday junction resolvase (NCBI) | compare |
| b3163 | nlpI | -2.3 | -4.8 | hypothetical protein (NCBI) | compare |
| b1765 | ydjA | -2.1 | -1.5 | predicted oxidoreductase (NCBI) | compare |
| b4701 | sokX | -2.1 | -1.4 | sok-related sRNA, function unknown (RefSeq) | compare |
| b1286 | rnb | -2.1 | -2.4 | exoribonuclease II (NCBI) | compare |
| b3042 | b3042 | -2.0 | -3.7 | orf, hypothetical protein (VIMSS) | compare |
| b3792 | wzxE | -2.0 | -6.5 | O-antigen translocase (NCBI) | compare |
| b0912 | ihfB | -2.0 | -3.7 | integration host factor subunit beta (NCBI) | compare |
| b0990 | cspG | -2.0 | -1.8 | DNA-binding transcriptional regulator (NCBI) | compare |
| b0212 | gloB | -2.0 | -2.8 | predicted hydroxyacylglutathione hydrolase (NCBI) | compare |
| b0729 | sucD | -1.9 | -3.4 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b1882 | cheY | -1.8 | -0.9 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b3652 | recG | -1.7 | -8.0 | ATP-dependent DNA helicase (NCBI) | compare |
| b4238 | nrdD | -1.7 | -11.4 | anaerobic ribonucleoside triphosphate reductase (NCBI) | compare |
| b1150 | ymfR | -1.7 | -1.2 | e14 prophage; predicted protein (NCBI) | compare |
| b0728 | sucC | -1.7 | -6.0 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b4237 | nrdG | -1.7 | -6.8 | anaerobic ribonucleotide reductase activating protein (NCBI) | compare |
| b4592 | yccB | -1.6 | -2.1 | hypothetical protein (RefSeq) | compare |
| b2616 | recN | -1.6 | -8.1 | recombination and repair protein (NCBI) | compare |
| b1936 | intG | -1.6 | -1.0 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b0902 | pflA | -1.6 | -6.1 | pyruvate formate lyase activating enzyme 1 (NCBI) | compare |
| b1861 | ruvA | -1.5 | -1.0 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b1291 | sapD | -1.4 | -1.6 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3868 | glnG | -1.4 | -4.1 | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | compare |
| b2637 | yfjT | -1.4 | -2.9 | CP4-57 prophage; predicted protein (NCBI) | compare |
| b2215 | ompC | -1.3 | -6.5 | outer membrane porin protein C (NCBI) | compare |
| b0730 | mngR | -1.3 | -1.2 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b4480 | hdfR | -1.3 | -4.5 | transcriptional regulator HdfR (NCBI) | compare |
| b4025 | pgi | -1.2 | -5.5 | glucose-6-phosphate isomerase (NCBI) | compare |
| b3935 | priA | -1.2 | -2.5 | primosome assembly protein PriA (NCBI) | compare |
| b2258 | b2258 | -1.2 | -1.4 | putative transport/receptor protein (VIMSS) | compare |
| b4535 | yniD | -1.2 | -1.3 | predicted protein (RefSeq) | compare |
| b2567 | rnc | -1.2 | -0.8 | ribonuclease III (NCBI) | compare |
| b3813 | uvrD | -1.2 | -8.0 | DNA-dependent ATPase I and helicase II (NCBI) | compare |
| b1730 | ydjO | -1.1 | -0.7 | predicted protein (RefSeq) | compare |
| b2894 | xerD | -1.1 | -0.7 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b3930 | menA | -1.1 | -8.2 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase (NCBI) | compare |
| b3838 | tatB | -1.1 | -4.3 | sec-independent translocase (NCBI) | compare |
| b4520 | ymgF | -1.1 | -1.4 | hypothetical protein (NCBI) | compare |
| b1969 | yedW | -1.1 | -2.8 | putative 2-component transcriptional regulator (VIMSS) | compare |
| b3261 | fis | -1.1 | -0.7 | DNA-binding protein Fis (NCBI) | compare |
| b1536 | ydeI | -1.1 | -0.7 | hypothetical protein (NCBI) | compare |
| b0149 | mrcB | -1.1 | -7.4 | penicillin-binding protein 1b (NCBI) | compare |
| b1824 | yobF | -1.1 | -2.5 | hypothetical protein (NCBI) | compare |
| b3199 | yrbK | -1.1 | -2.2 | hypothetical protein (NCBI) | compare |
| b1663 | mdtK | -1.1 | -4.2 | multidrug efflux protein NorM (NCBI) | compare |
| b2433 | b2433 | -1.1 | -2.3 | orf, hypothetical protein (VIMSS) | compare |
| b1480 | sra | -1.1 | -1.3 | 30S ribosomal subunit protein S22 (NCBI) | compare |
| b4695 | ykgT | -1.1 | -1.1 | no description | compare |
| b2820 | recB | -1.1 | -0.7 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b4679 | yohP | -1.1 | -2.2 | expressed protein (RefSeq) | compare |
| b0232 | yafN | -1.1 | -0.7 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b0487 | cueR | -1.1 | -2.0 | DNA-binding transcriptional activator of copper-responsive regulon genes (NCBI) | compare |
| b1951 | rcsA | -1.0 | -0.7 | DNA-binding transcriptional activator, co-regulator with RcsB (NCBI) | compare |
| b4435 | isrC | -1.0 | -1.8 | unknown RNA (NCBI) | compare |
| b1600 | mdtJ | -1.0 | -1.5 | multidrug efflux system transporter (NCBI) | compare |
| b4653 | yicT | -1.0 | -1.9 | no description | compare |
| b1306 | pspC | -1.0 | -2.4 | DNA-binding transcriptional activator (NCBI) | compare |
| b4191 | ulaR | -1.0 | -2.9 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1175 | minD | -1.0 | -3.3 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b0949 | uup | -1.0 | -5.1 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b0783 | moaC | -1.0 | -3.8 | molybdenum cofactor biosynthesis protein C (NCBI) | compare |
| b1634 | tppB | -1.0 | -3.7 | putative tripeptide transporter permease (NCBI) | compare |
| b1252 | tonB | -1.0 | -2.3 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b1984 | asnW | -1.0 | -1.1 | tRNA-Asn (NCBI) | compare |
| b1567 | intK | -1.0 | -1.9 | Qin prophage; predicted protein (RefSeq) | compare |
| b0145 | dksA | -1.0 | -1.8 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b3148 | yraN | -1.0 | -3.0 | hypothetical protein (NCBI) | compare |
| b1192 | ldcA | -1.0 | -3.2 | L,D-carboxypeptidase A (NCBI) | compare |
| b0799 | dinG | -1.0 | -5.3 | ATP-dependent DNA helicase (NCBI) | compare |
| b0765 | modC | -1.0 | -3.4 | molybdate transporter subunit (NCBI) | compare |
| b1164 | ycgZ | -1.0 | -1.1 | hypothetical protein (NCBI) | compare |
| b1370 | insH-5 | -1.0 | -2.0 | Rac prophage; IS5 transposase and trans-activator (NCBI) | compare |
| b1671 | ydhX | -1.0 | -1.8 | predicted 4Fe-4S ferridoxin-type protein (RefSeq) | compare |
| b2450 | yffS | -1.0 | -1.4 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b1961 | dcm | -1.0 | -1.4 | DNA cytosine methylase (NCBI) | compare |
| b3870 | glnA | -0.9 | -1.8 | glutamine synthetase (NCBI) | compare |
| b0009 | mog | -0.9 | -4.9 | molybdenum cofactor biosynthesis protein (NCBI) | compare |
| b3260 | dusB | -0.9 | -3.5 | tRNA-dihydrouridine synthase B (NCBI) | compare |
| b1101 | ptsG | -0.9 | -5.0 | fused glucose-specific PTS enzymes: IIB component/IIC component (NCBI) | compare |
| b0903 | pflB | -0.9 | -5.3 | pyruvate formate lyase I (NCBI) | compare |
| b1726 | yniB | -0.9 | -1.7 | predicted inner membrane protein (NCBI) | compare |
| b4640 | yoeG | -0.9 | -1.3 | no description | compare |
| b2699 | recA | -0.9 | -0.6 | recombinase A (NCBI) | compare |
| b1579 | intQ | -0.9 | -1.7 | Qin prophage; predicted defective integrase (RefSeq) | compare |
| b2698 | recX | -0.9 | -1.9 | RecA regulator RecX (NCBI) | compare |
| b0014 | dnaK | -0.9 | -1.2 | molecular chaperone DnaK (NCBI) | compare |
| b1860 | ruvB | -0.8 | -0.5 | Holliday junction DNA helicase B (NCBI) | compare |
| b1551 | b1551 | -0.8 | -0.5 | orf, hypothetical protein (VIMSS) | compare |
| b1196 | ycgY | -0.8 | -1.2 | hypothetical protein (NCBI) | compare |
| b1877 | yecT | -0.8 | -0.9 | orf, hypothetical protein (VIMSS) | compare |
| b2822 | recC | -0.8 | -2.4 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b4579 | yaiX | -0.8 | -2.7 | no description | compare |
| b0364 | yaiS | -0.8 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b1171 | b1171 | -0.8 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b0053 | surA | -0.8 | -3.2 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b1493 | gadB | -0.8 | -0.7 | glutamate decarboxylase B, PLP-dependent (NCBI) | compare |
| b0781 | moaA | -0.8 | -4.6 | molybdenum cofactor biosynthesis protein A (NCBI) | compare |
| b0051 | ksgA | -0.8 | -2.2 | dimethyladenosine transferase (NCBI) | compare |
| b2110 | yehC | -0.8 | -0.7 | predicted periplasmic pilin chaperone (NCBI) | compare |
| b0785 | moaE | -0.8 | -2.6 | molybdopterin synthase, large subunit (NCBI) | compare |
| b2329 | aroC | -0.8 | -3.1 | chorismate synthase (NCBI) | compare |
| b3443 | yrhA | -0.8 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b4494 | arpB | -0.8 | -0.7 | no description | compare |
| b4523 | yciX | -0.8 | -2.8 | hypothetical protein (RefSeq) | compare |
| b1067 | yceH | -0.8 | -2.6 | hypothetical protein (NCBI) | compare |
| b4146 | yjeK | -0.8 | -0.9 | predicted lysine aminomutase (NCBI) | compare |
| b0605 | ahpC | -0.8 | -2.1 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b1848 | yebG | -0.8 | -1.1 | conserved protein regulated by LexA (NCBI) | compare |
| b1409 | ynbB | -0.8 | -0.7 | predicted CDP-diglyceride synthase (NCBI) | compare |
| b1742 | b1742 | -0.8 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b0683 | fur | -0.7 | -0.9 | ferric uptake regulator (NCBI) | compare |
| b4603 | rseX | -0.7 | -0.6 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b2892 | recJ | -0.7 | -4.3 | ssDNA exonuclease, 5' --> 3'-specific (NCBI) | compare |
| b4341 | yjiS | -0.7 | -2.4 | hypothetical protein (NCBI) | compare |
| b0764 | modB | -0.7 | -2.3 | molybdate ABC transporter permease protein (NCBI) | compare |
| b1124 | potC | -0.7 | -2.7 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b3629 | rfaS | -0.7 | -1.3 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b3839 | tatC | -0.7 | -3.4 | TatABCE protein translocation system subunit (NCBI) | compare |
| b1346 | ydaQ | -0.7 | -0.9 | orf, hypothetical protein (VIMSS) | compare |
| b3764 | yifE | -0.7 | -1.8 | hypothetical protein (NCBI) | compare |
| b0499 | ylbH | -0.7 | -2.0 | conserved protein, rhs-like (RefSeq) | compare |
| b1497 | b1497 | -0.7 | -0.4 | putative enzyme (VIMSS) | compare |
| b1499 | ydeO | -0.7 | -0.3 | predicted DNA-binding transcriptional acfivator (NCBI) | compare |
| b3869 | glnL | -0.7 | -4.2 | sensory histidine kinase in two-component regulatory system with GlnG (NCBI) | compare |
| b1607 | ydgC | -0.7 | -0.9 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b2111 | yehD | -0.7 | -1.5 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b1309 | ycjM | -0.7 | -2.0 | putative polysaccharide hydrolase (VIMSS) | compare |
| b0763 | modA | -0.7 | -1.9 | molybdate transporter subunit (NCBI) | compare |
| b2165 | yeiN | -0.7 | -2.7 | hypothetical protein (NCBI) | compare |
| b1712 | ihfA | -0.7 | -0.6 | integration host factor subunit alpha (NCBI) | compare |
| b3096 | yqjB | -0.7 | -3.4 | hypothetical protein (NCBI) | compare |
| b1505 | ydeT | -0.7 | -0.7 | hypothetical protein (RefSeq) | compare |
| b4375 | prfC | -0.7 | -1.8 | peptide chain release factor 3 (NCBI) | compare |
| b1363 | trkG | -0.7 | -0.4 | Rac prophage; potassium transporter subunit (NCBI) | compare |
| b1290 | sapF | -0.7 | -0.9 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1785 | yeaI | -0.7 | -1.2 | predicted diguanylate cyclase (NCBI) | compare |
| b3644 | yicC | -0.7 | -2.7 | hypothetical protein (NCBI) | compare |
| b3672 | ivbL | -0.7 | -2.3 | ilvB operon leader peptide (NCBI) | compare |
| b3928 | yiiU | -0.7 | -3.4 | hypothetical protein (NCBI) | compare |
| b0696 | kdpC | -0.7 | -1.6 | potassium-transporting ATPase subunit C (NCBI) | compare |
| b1696 | ydiP | -0.7 | -1.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1545 | pinQ | -0.7 | -0.3 | Qin prophage; predicted site-specific recombinase (NCBI) | compare |
| b1302 | puuE | -0.7 | -1.9 | GABA aminotransferase, PLP-dependent (NCBI) | compare |
| b1690 | ydiM | -0.7 | -0.8 | predicted transporter (NCBI) | compare |
| b2471 | yffB | -0.7 | -2.1 | hypothetical protein (NCBI) | compare |
| b2278 | nuoL | -0.7 | -3.9 | NADH dehydrogenase subunit L (NCBI) | compare |
| b1531 | marA | -0.7 | -1.2 | multiple antibiotic resistance; transcriptional activator of defense systems (VIMSS) | compare |
| b1968 | yedV | -0.7 | -1.2 | predicted sensory kinase in two-component regulatory system with YedW (NCBI) | compare |
| b1576 | ydfD | -0.7 | -0.3 | Qin prophage; predicted protein (NCBI) | compare |
| b1235 | rssB | -0.7 | -3.3 | response regulator of RpoS (NCBI) | compare |
| b2991 | hybF | -0.7 | -2.4 | protein involved with the maturation of hydrogenases 1 and 2 (NCBI) | compare |
| b3766 | ilvL | -0.6 | -2.0 | ilvG operon leader peptide (NCBI) | compare |
| b1351 | racC | -0.6 | -0.3 | Rac prophage; predicted protein (NCBI) | compare |
| b1013 | ycdC | -0.6 | -1.6 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1514 | lsrC | -0.6 | -1.4 | AI2 transporter (NCBI) | compare |
| b0740 | tolB | -0.6 | -2.0 | translocation protein TolB precursor (NCBI) | compare |
| b4389 | radA | -0.6 | -3.7 | predicted repair protein (NCBI) | compare |
| b1347 | ydaC | -0.6 | -0.3 | Rac prophage; predicted protein (NCBI) | compare |
| b1307 | pspD | -0.6 | -1.1 | peripheral inner membrane phage-shock protein (NCBI) | compare |
| b4000 | hupA | -0.6 | -2.1 | HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) | compare |
| b0239 | frsA | -0.6 | -3.9 | fermentation/respiration switch protein (NCBI) | compare |
| b3626 | rfaJ | -0.6 | -1.5 | UDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase (NCBI) | compare |
| b3484 | yhhI | -0.6 | -1.4 | predicted transposase (NCBI) | compare |
| b2629 | yfjM | -0.6 | -1.7 | CP4-57 prophage; predicted protein (NCBI) | compare |
| b2997 | hybO | -0.6 | -3.1 | hydrogenase 2, small subunit (NCBI) | compare |
| b0430 | cyoC | -0.6 | -2.0 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b3354 | yheU | -0.6 | -2.8 | hypothetical protein (NCBI) | compare |
| b2398 | yfeC | -0.6 | -0.9 | orf, hypothetical protein (VIMSS) | compare |
| b0989 | cspH | -0.6 | -0.8 | stress protein, member of the CspA-family (NCBI) | compare |
| b2553 | glnB | -0.6 | -2.0 | regulatory protein P-II for glutamine synthetase (NCBI) | compare |
| b2896 | ygfX | -0.6 | -2.3 | hypothetical protein (NCBI) | compare |
| b4100 | phnH | -0.6 | -1.7 | carbon-phosphorus lyase complex subunit (NCBI) | compare |
| b0804 | ybiX | -0.6 | -2.3 | putative enzyme (VIMSS) | compare |
| b4497 | yeeL | -0.6 | -0.4 | no description | compare |
| b4513 | kdpF | -0.6 | -1.1 | potassium ion accessory transporter subunit (NCBI) | compare |
| b1109 | ndh | -0.6 | -1.5 | respiratory NADH dehydrogenase 2/cupric reductase (NCBI) | compare |
| b0225 | yafQ | -0.6 | -1.6 | predicted toxin of the YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b1163 | ycgF | -0.6 | -1.8 | predicted FAD-binding phosphodiesterase (NCBI) | compare |
| b0761 | modE | -0.6 | -3.0 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b4538 | yoeF | -0.6 | -0.9 | hypothetical protein (RefSeq) | compare |
| b4543 | ypaA | -0.6 | -1.5 | predicted protein (NCBI) | compare |
| b4239 | treC | -0.6 | -1.0 | trehalose-6-P hydrolase (NCBI) | compare |
| b4215 | ytfI | -0.6 | -0.4 | hypothetical protein (NCBI) | compare |
| b0968 | yccX | -0.6 | -1.6 | predicted acylphosphatase (NCBI) | compare |
| b2494 | yfgC | -0.6 | -3.0 | predicted peptidase (NCBI) | compare |
| b0483 | ybaQ | -0.6 | -2.5 | orf, hypothetical protein (VIMSS) | compare |
| b1293 | sapB | -0.6 | -0.8 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3247 | cafA | -0.6 | -3.7 | bundles of cytoplasmic filaments (VIMSS) | compare |
| b4184 | yjfL | -0.6 | -1.6 | conserved inner membrane protein (NCBI) | compare |