Protein Info for MPMX19_04878 in Azospirillum sp. SherDot2

Annotation: Agmatine deiminase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF04371: PAD_porph
  • amino acids 19 to 345 (327 residues), 411.8 bits, E=1.1e-127

Best Hits

Swiss-Prot: 54% identical to AGUA_LEGPL: Putative agmatine deiminase (aguA) from Legionella pneumophila (strain Lens)

KEGG orthology group: K10536, agmatine deiminase [EC: 3.5.3.12] (inferred from 94% identity to azl:AZL_c00730)

Predicted SEED Role

"Agmatine deiminase (EC 3.5.3.12)" in subsystem Arginine and Ornithine Degradation or Polyamine Metabolism (EC 3.5.3.12)

MetaCyc Pathways

• L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway) (3/3 steps found)
• putrescine biosynthesis II (3/3 steps found)
• superpathway of polyamine biosynthesis II (5/8 steps found)

KEGG Metabolic Maps

• Arginine and proline metabolism
• Urea cycle and metabolism of amino groups

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.5.3.12

Protein Sequence (347 amino acids)

>MPMX19_04878 Agmatine deiminase (Azospirillum sp. SherDot2)
MTTPNAPMPTGEGTGQGFRMPGEWASHSGCWMAWPCRPETWPEGAFDAACDAYAEVAQAI
SRFEPVTMVCDPADVAEASLACGPGIQILPLPISDSWIRDTGPSFVIDGKGGLAGVHWGF
NAWGGNYQGSDKDQQVGRLILDHLKLPCISAPLVMEGGSFHVDGEGTLITTEQCLLNPNR
NPGLSREEIEQQLKDHLGVETVIWLGQGYQDDETDGHIDEIALFVRPGVVMAITTDDPGD
PNFKIFQDNLDRLKRARDAKGRELEVITIQQPARRDLNGVRLTLSYTNLYIANGGIVMPA
FEDPADDEAFRVVRKAFPDREVVQIAALDIVRGGGGIHCITQQQPLP