Protein Info for MPMX19_03683 in Azospirillum sp. SherDot2

Annotation: Fe(2+) transporter FeoB

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 644 transmembrane" amino acids 247 to 270 (24 residues), see Phobius details amino acids 303 to 327 (25 residues), see Phobius details amino acids 351 to 371 (21 residues), see Phobius details amino acids 382 to 407 (26 residues), see Phobius details amino acids 419 to 442 (24 residues), see Phobius details amino acids 480 to 500 (21 residues), see Phobius details amino acids 517 to 544 (28 residues), see Phobius details amino acids 546 to 563 (18 residues), see Phobius details amino acids 583 to 606 (24 residues), see Phobius details amino acids 613 to 637 (25 residues), see Phobius details PF01926: MMR_HSR1" amino acids 17 to 134 (118 residues), 68.2 bits, see alignment E=1.7e-22 PF02421: FeoB_N" amino acids 17 to 177 (161 residues), 181.1 bits, see alignment E=2.8e-57 PF07670: Gate" amino acids 311 to 405 (95 residues), 73.6 bits, see alignment E=4.1e-24 amino acids 482 to 612 (131 residues), 55.4 bits, see alignment E=1.9e-18 PF07664: FeoB_C" amino acids 424 to 476 (53 residues), 64.3 bits, see alignment 1.7e-21

Best Hits

KEGG orthology group: K04759, ferrous iron transport protein B (inferred from 94% identity to azl:AZL_b04580)

Predicted SEED Role

"Ferrous iron transport protein B" in subsystem Campylobacter Iron Metabolism or Iron acquisition in Vibrio or Transport of Iron

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (644 amino acids)

>MPMX19_03683 Fe(2+) transporter FeoB (Azospirillum sp. SherDot2)
MSDTVLSTPAFTGIPPRIALVGNPNCGKTALFNALTGARQKVANYPGVTVERKIGEFLSP
AGTRVQLVDLPGTYSLRARSPDEEVTRDVVLGRFQHEAPPDVMVCVADATNLRLHLRLVL
ELKKLGRPIILALNMMDVAEARGCRVDAAALSAALGVPVVPTVAIKRTSVVGLLDQIDRS
MIAMTAALAPSSGSAPANSPCGWSEPSALDLRAYHQEVETILAAALRDAGRPSLATRRID
DALLHPAIGLPFLFLVLFLMFQAVFAWAAVPMDMIDKGLGWIQAGAGAALPDGLLKSLLT
DGIIAGVGSVVIFLPQILVLFFFILMLESTGYMARAAFLLDRLMGGVGLHGRAFIPLLSS
FACAVPGIMAARTIENRADRLATIMIAPLMTCSARLPVYTLIIAAFVPDRTVTGGMIGLQ
GLVMFALYAAGILSALAAAFVLKRTIFKGAREPLLMELPSYRLPSPRDILLGLLERARIF
LARAGTVIFSIMILLWFLGSFPAAPDGATGPAIDYSFAGMLGHALAPLLAPIGFTWQIAI
ALVPGMAAREVAVAALGTVYALSETGDALSGSLAGVLAADWSLPTALSLLAWFVFAPQCV
STLSVVKRETNSWFWMLVMIVYMTALAYGAAFVTFHLSSALLGG