Protein Info for MPMX19_03428 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 642 transmembrane" amino acids 12 to 36 (25 residues), see Phobius details amino acids 161 to 184 (24 residues), see Phobius details amino acids 289 to 309 (21 residues), see Phobius details amino acids 316 to 332 (17 residues), see Phobius details amino acids 338 to 355 (18 residues), see Phobius details amino acids 362 to 382 (21 residues), see Phobius details amino acids 402 to 435 (34 residues), see Phobius details amino acids 470 to 489 (20 residues), see Phobius details amino acids 500 to 518 (19 residues), see Phobius details amino acids 525 to 545 (21 residues), see Phobius details amino acids 551 to 569 (19 residues), see Phobius details amino acids 576 to 594 (19 residues), see Phobius details amino acids 600 to 621 (22 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 90% identity to azl:AZL_a01670)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (642 amino acids)

>MPMX19_03428 hypothetical protein (Azospirillum sp. SherDot2)
MLFGSEHPVRRFVPLLVAVVVIPWIATLAAALVGAANLADRGTATRTDIVGQALVQDLEK
ALGLGLPLNRLAGMDDYLEELSDIVPEIELVLIADADGKTLFQKATTGRPDLSARLSAAE
TDWSAFHLSVQRYPLRTGATQSGEVILGRKALAQPANTRRILIDFAVALTIALTGGSLLL
RMLVHTQLVAPLGYASGLDAVVARRVYDRIAPPVDQSLIGGLLAEMNRLVIGVNDRFARA
HAYLTEVRDLSFNPDAAAEVEPLIARIERLGRFSPDRLAALPPVAGNPLPHAVVFFAAVA
LSILAGVAAQRLPLDTALAATALGVALAAPFARVVGRYGLAVTLAALVAWGVTTLSDPGR
DLLLAAAVLGGIGAGLSVQTIRPILDTLGADLGVSATGGLVAGAGISILCTASIGTGPVM
GIGALSAAIGLLVALRVERVASARRVPLILRQIFTLDRWWSGGRPAPKGWALWLVTGLAL
TYAAMPQVAGTPGVRQGAEFIWFHGGAAWLAAIAVVALSPRPAAAVLLSLSATALAAGAL
ALGAAAAGPGTALAVAAALGAGHAALAAGGENGGLVALRGAMALLAGMGLPLLLGGNAGV
VAASAGLVVTVALLPPIALALRRVLLDRRTVPAAAAEGSAAA