Protein Info for MPMX19_00223 in Azospirillum sp. SherDot2

Annotation: Zinc-type alcohol dehydrogenase-like protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 341 transmembrane" amino acids 117 to 136 (20 residues), see Phobius details amino acids 156 to 174 (19 residues), see Phobius details TIGR02817: zinc-binding alcohol dehydrogenase family protein" amino acids 2 to 341 (340 residues), 542.7 bits, see alignment E=2e-167 PF08240: ADH_N" amino acids 32 to 106 (75 residues), 46.3 bits, see alignment E=6.4e-16 PF00107: ADH_zinc_N" amino acids 165 to 269 (105 residues), 54.8 bits, see alignment E=1.5e-18 PF13602: ADH_zinc_N_2" amino acids 198 to 338 (141 residues), 64.6 bits, see alignment E=2.9e-21

Best Hits

KEGG orthology group: None (inferred from 91% identity to azl:AZL_003510)

Predicted SEED Role

"Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase ( NADPH:quinone reductase) (EC 1.1.1.-); Similar to arginate lyase" (EC 1.1.1.-)

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 1.1.1.-

Use Curated BLAST to search for 1.1.1.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (341 amino acids)

>MPMX19_00223 Zinc-type alcohol dehydrogenase-like protein (Azospirillum sp. SherDot2)
MKAVGFRKSLPIADAGALIDVEIDRPAPAGRDLLVRVEAVSVNPVDTKVRRNALPTEGDL
RILGFDAAGIVEAVGPDVTLFRPGDAVFYAGSIDRPGTNSEYHLVDERIVGARPASLSVA
EAAALPLTAITAWEMLFHRLGLPRDGDGKNAGEGKSLLIVGGAGGVGSIAIQLARRLSRV
RVLATASRPETADWVRELGAHDVIDHSRPMAEQVKALGLAGVDYIFSTNATDRHFQDLVE
LVAPQGHIGLIDDPEPIDVRLLKRKSVSLHWELMFTRPLFQTDDMIAQHELLTEVSRLVD
AGTLRTTLTETLGRIDAATLRKAHALIESGKARGKVVLEGF