Protein Info for SGL_RS15530 in Synechocystis sp000284455 PCC 6803

Annotation: phosphoribosylformylglycinamidine synthase subunit PurQ

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 224 TIGR01737: phosphoribosylformylglycinamidine synthase I" amino acids 4 to 223 (220 residues), 315.1 bits, see alignment E=1.1e-98 PF13507: GATase_5" amino acids 6 to 213 (208 residues), 144.3 bits, see alignment E=3.9e-46 PF07685: GATase_3" amino acids 31 to 95 (65 residues), 31.3 bits, see alignment E=1.6e-11

Best Hits

Swiss-Prot: 100% identical to PURQ_SYNY3: Phosphoribosylformylglycinamidine synthase subunit PurQ (purQ) from Synechocystis sp. (strain PCC 6803 / Kazusa)

KEGG orthology group: K01952, phosphoribosylformylglycinamidine synthase [EC: 6.3.5.3] (inferred from 100% identity to syn:slr0520)

Predicted SEED Role

"Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)" in subsystem De Novo Purine Biosynthesis (EC 6.3.5.3)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 6.3.5.3

Use Curated BLAST to search for 6.3.5.3

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (224 amino acids)

>SGL_RS15530 phosphoribosylformylglycinamidine synthase subunit PurQ (Synechocystis sp000284455 PCC 6803)
MTSFGIIVFPGSNCDRDIATVTAGLLDQPTRFIWHQETDLHGVDVVVLPGGFSYGDYLRC
GAIARFSPIMTAIIDHANAGKRVLGICNGFQVLTEVGLLPGALIRNRDLHFICDRVTVRV
ESNQTVWTKGYQSQQVITLPIAHGEGRYFADGDTLKALEDNEQILFRYSNAQGELTTDSN
PNGSLHNIAGITNVQGNVLGMMPHPERAADRLLKATDGLAMFIS