Protein Info for MPMX19_05353 in Azospirillum sp. SherDot2

Annotation: Fatty acid resistance protein FarB

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 514 transmembrane" amino acids 21 to 42 (22 residues), see Phobius details amino acids 55 to 76 (22 residues), see Phobius details amino acids 85 to 105 (21 residues), see Phobius details amino acids 111 to 132 (22 residues), see Phobius details amino acids 144 to 164 (21 residues), see Phobius details amino acids 173 to 193 (21 residues), see Phobius details amino acids 205 to 222 (18 residues), see Phobius details amino acids 236 to 256 (21 residues), see Phobius details amino acids 277 to 298 (22 residues), see Phobius details amino acids 310 to 331 (22 residues), see Phobius details amino acids 342 to 364 (23 residues), see Phobius details amino acids 370 to 395 (26 residues), see Phobius details amino acids 407 to 427 (21 residues), see Phobius details amino acids 480 to 497 (18 residues), see Phobius details TIGR00711: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family" amino acids 19 to 485 (467 residues), 406 bits, see alignment E=1.1e-125 PF07690: MFS_1" amino acids 23 to 419 (397 residues), 197.8 bits, see alignment E=3.7e-62 PF00083: Sugar_tr" amino acids 33 to 196 (164 residues), 44.6 bits, see alignment E=1.5e-15

Best Hits

KEGG orthology group: K03446, MFS transporter, DHA2 family, multidrug resistance protein B (inferred from 95% identity to azl:AZL_d00230)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (514 amino acids)

>MPMX19_05353 Fatty acid resistance protein FarB (Azospirillum sp. SherDot2)
MAVPQSPAAPHEVKHRGMITVSIMLATIMQVLDTTIANVALPSMQGSLGAAQDTITWVLT
SYIVAAAIATPATGWMADRFGRKRLFLIAVAGFTAASVLCGLAGSLTQMVAFRLVQGIFG
AALVPLSQSVLLDINPKERHGQAMALWGAGIMVGPIAGPTLGGWLTDSFSWRWVFYINLP
VGLLAFAGMAVFLHETKGRIRSFDFFGFAMLGLAVGAFQMLLDRGEQLDWFGATEIWIET
ALAACAFWVFAIHIATAHGNTKTEPFIDPALLRDRNFVTGLVLIFVIGVILLATMALLPP
MLQNLLGYPTVTTGLVLAPRGVGTMISMLMVGRLVRRVDARLLILAGVLLTSWSLWYMTG
FTIVMDREPIIISGVVQGLGLGLVFVPLSTIAFATLEPRLRTDAASLFSLVRNLGSSVGI
SVVMTLLSQNTQINHASLAAHLTPFSQAMTEQVTAAPEALAMLNAQVTQQAAMIAYIDDF
KLMMYVALLVIPMLLLLRRPKAGAPAPEEAAVME