Protein Info for EX28DRAFT_1811 in Enterobacter asburiae PDN3

Annotation: Transcriptional regulator/sugar kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 303 transmembrane" amino acids 124 to 139 (16 residues), see Phobius details PF00480: ROK" amino acids 2 to 300 (299 residues), 242.6 bits, see alignment E=6.7e-76 PF02685: Glucokinase" amino acids 6 to 255 (250 residues), 29.2 bits, see alignment E=4.8e-11

Best Hits

Swiss-Prot: 86% identical to NAGK_SALPK: N-acetyl-D-glucosamine kinase (nagK) from Salmonella paratyphi A (strain AKU_12601)

KEGG orthology group: K00884, N-acetylglucosamine kinase [EC: 2.7.1.59] (inferred from 98% identity to enc:ECL_02517)

MetaCyc: 85% identical to N-acetyl-D-glucosamine kinase (Escherichia coli K-12 substr. MG1655)
N-acetylglucosamine kinase. [EC: 2.7.1.59]

Predicted SEED Role

"N-acetyl-D-glucosamine kinase (EC 2.7.1.59)" (EC 2.7.1.59)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.1.59

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (303 amino acids)

>EX28DRAFT_1811 Transcriptional regulator/sugar kinase (Enterobacter asburiae PDN3)
MYYGFDIGGTKIALGVFDKDLRLQWETRVPTPRESYDEFLTAIAALVAQADERFGVKGSV
GIGIPGMPETDDGTLYAANVPAASGKPLRADLSALLERDVRLDNDANCFALSEAWDDEFR
QYPLVMGLILGTGVGGGIVINGKPITGRSYITGEFGHIRLPVDALEVVGRDFPLTRCGCG
QHGCIENYLSGRGFAWLYEHFYHQKLEAPQIITLWEQGDAQACEHVERYLDLLAVCLGNI
LTIVDPDLLVIGGGLSNFTAITERLSGRLPRHLLPVARVPRIERARHGDAGGMRGAAFLH
LTD