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  • Negative cofitness for Psyr_4642 from Pseudomonas syringae pv. syringae B728a

    diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
    SEED: sensory box/GGDEF domain/EAL domain protein

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_4623 Aminoglycoside phosphotransferase -0.38
    2 Psyr_4078 AmpG-related permease -0.33
    3 Psyr_0560 conserved hypothetical protein -0.33
    4 Psyr_4463 Protein of unknown function DUF193 -0.33
    5 Psyr_4036 virulence plasmid 65kDa B protein -0.33
    6 Psyr_3912 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal -0.32
    7 Psyr_5033 PAS/PAC sensor signal transduction histidine kinase -0.32
    8 Psyr_3690 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase -0.32
    9 Psyr_4622 Nucleotidyl transferase -0.31
    10 Psyr_2976 Phage integrase:Phage integrase, N-terminal SAM-like protein -0.31
    11 Psyr_4852 D-3-phosphoglycerate dehydrogenase -0.31
    12 Psyr_0557 phosphoserine phosphatase -0.30
    13 Psyr_0377 Periplasmic glucan biosynthesis protein, MdoG -0.30
    14 Psyr_2694 conserved hypothetical protein -0.30
    15 Psyr_1668 amidophosphoribosyltransferase -0.30
    16 Psyr_5062 transcriptional regulator, LysR family -0.30
    17 Psyr_1035 lipoprotein, putative -0.29
    18 Psyr_3748 GCN5-related N-acetyltransferase -0.29
    19 Psyr_0371 conserved hypothetical protein -0.29
    20 Psyr_3597 ABC transporter -0.29

    Or look for positive cofitness