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  • Negative cofitness for Psyr_3478 from Pseudomonas syringae pv. syringae B728a

    Flagellar basal body rod protein:Protein of unknown function DUF1078:Flagellar basal body FlaE
    SEED: Flagellar hook protein FlgE
    KEGG: flagellar hook protein FlgE

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_4770 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) -0.58
    2 Psyr_0478 pilus retraction ATPase PilT -0.52
    3 Psyr_3306 Glycoside hydrolase, family 5 -0.50
    4 Psyr_3963 conserved hypothetical protein -0.49
    5 Psyr_1982 transcriptional regulator, LysR family -0.45
    6 Psyr_0816 conserved hypothetical protein -0.45
    7 Psyr_0918 ABC transporter -0.45
    8 Psyr_3655 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) -0.45
    9 Psyr_1663 phosphoribosylanthranilate isomerase -0.44
    10 Psyr_3491 Major facilitator superfamily -0.43
    11 Psyr_0917 ABC-2 -0.42
    12 Psyr_0827 pantothenate synthetase -0.40
    13 Psyr_3544 putative integral membrane protein -0.40
    14 Psyr_0030 transcriptional regulator, LysR family -0.40
    15 Psyr_3160 Type I secretion membrane fusion protein, HlyD -0.39
    16 Psyr_0086 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) -0.39
    17 Psyr_4581 anthranilate synthase, component II -0.38
    18 Psyr_4580 anthranilate phosphoribosyltransferase -0.38
    19 Psyr_0346 Acriflavin resistance protein -0.37
    20 Psyr_0459 5,10-methylenetetrahydrofolate reductase -0.37

    Or look for positive cofitness