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  • Negative cofitness for Psyr_3116 from Pseudomonas syringae pv. syringae B728a

    transcriptional regulator, CdaR family
    SEED: Sugar diacid utilization regulator SdaR
    KEGG: carbohydrate diacid regulator

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_2636 TspO/MBR-related protein -0.41
    2 Psyr_3828 Protein of unknown function DUF482 -0.41
    3 Psyr_1540 hypothetical protein -0.37
    4 Psyr_0720 Fimbrial protein pilin -0.37
    5 Psyr_4477 MscS Mechanosensitive ion channel -0.37
    6 Psyr_0719 type IV pilus-associated protein, putative -0.37
    7 Psyr_3996 PAS/PAC sensor hybrid histidine kinase -0.36
    8 Psyr_1792 Amino acid adenylation -0.36
    9 Psyr_3774 PAS -0.35
    10 Psyr_0716 type IV pilus assembly protein PilV -0.35
    11 Psyr_2574 quinoprotein glucose dehydrogenase -0.35
    12 Psyr_0802 Peptidase S1, chymotrypsin -0.35
    13 Psyr_2341 conserved hypothetical protein -0.34
    14 Psyr_2668 Helix-turn-helix, Fis-type -0.34
    15 Psyr_0855 conserved hypothetical protein -0.34
    16 Psyr_4519 General substrate transporter:Major facilitator superfamily -0.34
    17 Psyr_4436 urease, Metallo peptidase, MEROPS family M38 -0.34
    18 Psyr_1765 GCN5-related N-acetyltransferase -0.34
    19 Psyr_3149 General secretion pathway protein G -0.33
    20 Psyr_0372 CDS -0.33

    Or look for positive cofitness